iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gac-041833

UUCD1 version

UUC-GaA-01017

Ensembl Protein ID

ENSGACP00000025433.1

UniProt Accession

G3Q6C4; G3Q6C4_GASAC

Protein Name

Uncharacterized protein

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGACG00000019241.1	ENSGACT00000025483.1	ENSGACP00000025433.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	6.90e-16	58.3	180	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w  +++++SLq+LC+++I++c++ + +   dkLPLP ++k++L+++++
   Q: 180  MEKFW-KPNRVFSLQDLCCRSIVSCTPVHLI---DKLPLPVAIKSHLKSFSM 227
           67888.99********************888...***************976 PP

Organism

Gasterosteus aculeatus

Protein Sequence
(Fasta)

MGTQSSPVKS YDYLLKFLLV GDSDVGKGEI LDSLQDGSVE SPYAYSSGID YKTTTILLDG 60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNGW SFDGIDRWIR EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCACAC AGAGTAGTCC AGTCAAGAGC TACGATTATC TCCTGAAATT CCTTTTGGTT 60
GGAGACAGCG ACGTTGGAAA AGGAGAAATT TTGGACAGTT TACAAGACGG ATCAGTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	90.41	5.00e-136	476.00
IUUC-Apl-003799	Anas platyrhynchos	82.80	2.00e-121	428.00
IUUC-Aca-005004	Anolis carolinensis	78.02	1.00e-126	445.00
IUUC-Ame-011203	Astyanax mexicanus	90.56	3.00e-154	536.00
IUUC-Bta-013490	Bos taurus	89.16	5.00e-139	486.00
IUUC-Cja-019990	Callithrix jacchus	88.85	3.00e-137	480.00
IUUC-Cfa-020527	Canis familiaris	71.56	5.00e-96	344.00
IUUC-Cpo-022437	Cavia porcellus	90.51	2.00e-135	475.00
IUUC-Csa-024147	Chlorocebus sabaeus	88.81	1.00e-138	485.00
IUUC-Cho-024716	Choloepus hoffmanni	69.77	2.00e-70	257.00
IUUC-Dre-027427	Danio rerio	91.26	3.00e-155	540.00
IUUC-Dno-029998	Dasypus novemcinctus	84.58	2.00e-107	384.00
IUUC-Dor-030584	Dipodomys ordii	77.73	4.00e-100	357.00
IUUC-Dme-031810	Drosophila melanogaster	62.02	6.00e-94	336.00
IUUC-Ete-033080	Echinops telfairi	94.09	1.00e-135	475.00
IUUC-Eca-033423	Equus caballus	86.25	3.00e-117	414.00
IUUC-Eeu-034590	Erinaceus europaeus	81.93	4.00e-105	373.00
IUUC-Fca-035697	Felis catus	87.03	2.00e-113	401.00
IUUC-Fal-037070	Ficedula albicollis	88.46	8.00e-139	486.00
IUUC-Gmo-039605	Gadus morhua	89.16	7.00e-152	529.00
IUUC-Gga-040343	Gallus gallus	88.46	8.00e-139	486.00
IUUC-Ggo-045131	Gorilla gorilla	81.47	3.00e-121	427.00
IUUC-Hsa-046237	Homo sapiens	88.81	1.00e-138	485.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	88.46	5.00e-139	486.00
IUUC-Lch-050193	Latimeria chalumnae	89.51	4.00e-152	530.00
IUUC-Loc-052243	Lepisosteus oculatus	91.26	2.00e-155	540.00
IUUC-Laf-054435	Loxodonta africana	84.97	2.00e-138	484.00
IUUC-Mcc-055337	Macaca mulatta	88.46	1.00e-137	481.00
IUUC-Meu-056731	Macropus eugenii	84.88	2.00e-71	262.00
IUUC-Mga-059204	Meleagris gallopavo	76.22	4.00e-133	466.00
IUUC-Mmr-061380	Microcebus murinus	88.73	7.00e-138	483.00
IUUC-Mdo-062438	Monodelphis domestica	88.11	3.00e-138	483.00
IUUC-Mmu-064046	Mus musculus	88.81	5.00e-139	486.00
IUUC-Mpu-066029	Mustela putorius furo	86.83	7.00e-116	409.00
IUUC-Mlu-067741	Myotis lucifugus	88.81	2.00e-138	484.00
IUUC-Nle-069240	Nomascus leucogenys	82.87	2.00e-125	441.00
IUUC-Opr-070662	Ochotona princeps	70.38	4.00e-122	430.00
IUUC-Ont-071866	Oreochromis niloticus	99.16	9.00e-143	499.00
IUUC-Oan-073432	Ornithorhynchus anatinus	86.25	8.00e-113	399.00
IUUC-Ocu-074559	Oryctolagus cuniculus	74.13	4.00e-123	433.00
IUUC-Olo-080270	Oryza longistaminata	33.33	2.00e-11	63.90
IUUC-Ola-086486	Oryzias latipes	89.24	6.00e-151	526.00
IUUC-Oga-088293	Otolemur garnettii	88.81	5.00e-139	486.00
IUUC-Oar-089702	Ovis aries	71.01	3.00e-104	370.00
IUUC-Ptr-090720	Pan troglodytes	88.81	1.00e-138	485.00
IUUC-Pan-091732	Papio anubis	88.81	1.00e-138	485.00
IUUC-Psi-093627	Pelodiscus sinensis	93.67	4.00e-135	473.00
IUUC-Pma-094401	Petromyzon marinus	73.05	2.00e-106	377.00
IUUC-Pfo-096187	Poecilia formosa	93.86	1.00e-161	561.00
IUUC-Pab-098054	Pongo abelii	88.81	1.00e-138	485.00
IUUC-Pca-100775	Procavia capensis	93.96	3.00e-84	303.00
IUUC-Pva-102658	Pteropus vampyrus	88.46	6.00e-138	483.00
IUUC-Rno-105303	Rattus norvegicus	88.81	5.00e-139	486.00
IUUC-Sha-106536	Sarcophilus harrisii	88.11	3.00e-138	483.00
IUUC-Sar-113518	Sorex araneus	71.43	2.00e-108	384.00
IUUC-Ssc-115719	Sus scrofa	72.26	2.00e-124	438.00
IUUC-Tgu-116858	Taeniopygia guttata	94.30	1.00e-108	385.00
IUUC-Tru-117605	Takifugu rubripes	91.12	2.00e-137	481.00
IUUC-Tsy-119011	Tarsius syrichta	70.71	1.00e-85	308.00
IUUC-Tni-120559	Tetraodon nigroviridis	96.50	7.00e-145	506.00
IUUC-Tbe-127818	Tupaia belangeri	28.80	2.00e-10	59.70
IUUC-Ttr-129236	Tursiops truncatus	89.16	2.00e-140	491.00
IUUC-Xtr-132079	Xenopus tropicalis	76.22	2.00e-134	471.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence