iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006690

Ensembl Protein ID

AT3G61740.1

UniProt Accession

Q9M364; C0SVF7; Q0WU37; ATX3_ARATH

Genbank Protein ID

CAB71104.1; AEE80250.1; BAE99361.1; BAH30498.1

Protein Name

Histone-lysine N-methyltransferase ATX3; Protein SET DOMAIN GROUP 14; Trithorax-homolog protein 3

Genbank Nucleotide ID

AL132959; CP002686; AK227351; AB493660

Gene Name

ATX3; SDG14; SET14; At3g61740; F15G16.130

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G61740	AT3G61740.2	AT3G61740.2
AT3G61740	AT3G61740.1	AT3G61740.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-09	38.9	547	595

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedek.slveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           + C+vC+  ++ e+ +++ C++C+ ++H++C + s +++  + + w C+ C+
   Q: 547  ERCAVCRWVEDWEEnKMIICNRCQVAVHQECYGVS-KSQ--DLTSWVCRACE 595
           67******9998888********************.443..4444******6 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Histone methyltransferase.

Protein Sequence
(Fasta)

MILKRTLTTF ENQNLKRCKI DSEIEYGRKK GEIIVYKKRQ RATVDQPCSK EPELLTSSSS 60
SLTSKEESQQ VCSDQSKSSR GRVRAVPSRF KDSIVGTWKS SRRKGESTES SHDDDDVSLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAGAACACA AAGATCCTTC TCCTCCTCTT TTGTTTTCCC TTGCCGTCGA TTTTAAGGTT 60
TTATCTTCTC CGTACTGAAA CCGACTGATA ATTTTCTCCA GGGAATCTAC GAGGAGGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0949--S-adenosyl-L-methionine
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR034732--EPHD
IPR025780--Hist-Lys_N-MeTrfase_ATX
IPR003616--Post-SET_dom
IPR000313--PWWP_dom
IPR000770--SAND_dom
IPR001214--SET_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51805--EPHD
PS50868--POST_SET
PS50812--PWWP
PS51566--SAM_MT43_TRX_MLL
PS50280--SET
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD
PF00855--PWWP
PF01342--SAND
PF00856--SET

SMART

SM00249--PHD
SM00508--PostSET
SM00293--PWWP
SM00317--SET

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0018024--F:histone-lysine N-methyltransferase activity
GO:0008270--F:zinc ion binding

KEGG

ath:AT3G61740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002274	Ailuropoda melanoleuca	47.40	1.00e-36	149.00
IUUC-Atr-002490	Amborella trichopoda	50.70	0.00e+00	825.00
IUUC-Apl-003478	Anas platyrhynchos	47.40	5.00e-37	150.00
IUUC-Aca-004718	Anolis carolinensis	46.10	6.00e-36	147.00
IUUC-Aly-006293	Arabidopsis lyrata	92.01	0.00e+00	1882.00
IUUC-Ame-010705	Astyanax mexicanus	45.45	3.00e-35	145.00
IUUC-Bta-012974	Bos taurus	47.40	1.00e-36	150.00
IUUC-Bol-016540	Brassica oleracea	73.25	0.00e+00	1522.00
IUUC-Cel-018354	Caenorhabditis elegans	44.51	6.00e-35	143.00
IUUC-Cja-019226	Callithrix jacchus	47.40	1.00e-36	149.00
IUUC-Cfa-021049	Canis familiaris	47.40	1.00e-36	149.00
IUUC-Cpo-021459	Cavia porcellus	47.40	2.00e-36	149.00
IUUC-Cre-022891	Chlamydomonas reinhardtii	45.80	5.00e-27	117.00
IUUC-Csa-023434	Chlorocebus sabaeus	47.40	2.00e-36	149.00
IUUC-Cho-024652	Choloepus hoffmanni	47.40	9.00e-35	144.00
IUUC-Cin-025724	Ciona intestinalis	46.50	8.00e-32	132.00
IUUC-Csv-026268	Ciona savignyi	44.81	2.00e-31	131.00
IUUC-Dre-028180	Danio rerio	47.74	2.00e-36	149.00
IUUC-Dno-029068	Dasypus novemcinctus	46.75	8.00e-36	147.00
IUUC-Dor-030550	Dipodomys ordii	47.40	1.00e-36	150.00
IUUC-Dme-032023	Drosophila melanogaster	43.51	6.00e-32	134.00
IUUC-Ete-032834	Echinops telfairi	47.40	1.00e-36	150.00
IUUC-Eca-033615	Equus caballus	47.40	2.00e-36	149.00
IUUC-Eeu-035136	Erinaceus europaeus	47.40	2.00e-36	149.00
IUUC-Fca-036311	Felis catus	44.16	9.00e-35	143.00
IUUC-Fal-037256	Ficedula albicollis	47.40	4.00e-37	151.00
IUUC-Gmo-038641	Gadus morhua	46.10	4.00e-35	145.00
IUUC-Gga-040828	Gallus gallus	47.40	4.00e-37	151.00
IUUC-Gac-042202	Gasterosteus aculeatus	45.45	4.00e-35	144.00
IUUC-Gma-044380	Glycine max	54.69	0.00e+00	1079.00
IUUC-Ggo-045124	Gorilla gorilla	47.40	2.00e-36	149.00
IUUC-Hsa-046143	Homo sapiens	47.40	2.00e-36	149.00
IUUC-Itr-048907	Ictidomys tridecemlineatus	44.16	7.00e-35	143.00
IUUC-Lch-049704	Latimeria chalumnae	46.10	4.00e-36	148.00
IUUC-Loc-052181	Lepisosteus oculatus	36.96	7.00e-37	150.00
IUUC-Laf-053946	Loxodonta africana	47.40	1.00e-36	149.00
IUUC-Mcc-055508	Macaca mulatta	47.40	2.00e-36	149.00
IUUC-Meu-056485	Macropus eugenii	47.40	9.00e-37	150.00
IUUC-Mtr-058327	Medicago truncatula	49.25	0.00e+00	987.00
IUUC-Mga-059943	Meleagris gallopavo	47.40	5.00e-37	151.00
IUUC-Mvi-060566	Microbotryum violaceum	28.99	1.00e-11	66.20
IUUC-Mmr-061178	Microcebus murinus	47.40	1.00e-36	149.00
IUUC-Mdo-063031	Monodelphis domestica	47.40	1.00e-36	150.00
IUUC-Mmu-063650	Mus musculus	47.40	2.00e-36	149.00
IUUC-Mpu-066495	Mustela putorius furo	47.40	1.00e-36	149.00
IUUC-Mlu-068045	Myotis lucifugus	47.40	1.00e-36	150.00
IUUC-Nle-069064	Nomascus leucogenys	47.40	1.00e-36	149.00
IUUC-Opr-071043	Ochotona princeps	46.75	5.00e-36	147.00
IUUC-Ont-072556	Oreochromis niloticus	47.40	4.00e-36	148.00
IUUC-Oan-072945	Ornithorhynchus anatinus	44.37	6.00e-30	128.00
IUUC-Ocu-074190	Oryctolagus cuniculus	46.10	2.00e-35	145.00
IUUC-Oba-075647	Oryza barthii	31.94	5.00e-62	232.00
IUUC-Olo-080577	Oryza longistaminata	56.07	2.00e-148	519.00
IUUC-Ome-081214	Oryza meridionalis	32.53	7.00e-63	235.00
IUUC-Oni-083000	Oryza nivara	32.14	4.00e-63	235.00
IUUC-Opu-083842	Oryza punctata	32.09	7.00e-62	231.00
IUUC-Oru-084361	Oryza rufipogon	32.14	6.00e-63	235.00
IUUC-Ola-087176	Oryzias latipes	46.10	7.00e-35	144.00
IUUC-Olu-087718	Ostreococcus lucimarinus	34.83	3.00e-44	174.00
IUUC-Oga-088208	Otolemur garnettii	47.40	2.00e-36	149.00
IUUC-Oar-090152	Ovis aries	47.40	1.00e-36	150.00
IUUC-Ptr-091127	Pan troglodytes	47.40	2.00e-36	149.00
IUUC-Pan-092679	Papio anubis	47.40	2.00e-36	149.00
IUUC-Psi-094059	Pelodiscus sinensis	47.10	1.00e-36	150.00
IUUC-Pma-094747	Petromyzon marinus	34.27	6.00e-18	86.30
IUUC-Pno-094990	Phaeosphaeria nodorum	26.32	5.20e-01	30.00
IUUC-Pfo-096536	Poecilia formosa	48.05	2.00e-36	149.00
IUUC-Pab-098262	Pongo abelii	47.40	1.00e-36	149.00
IUUC-Pca-100358	Procavia capensis	47.40	1.00e-36	150.00
IUUC-Pva-102522	Pteropus vampyrus	47.40	1.00e-36	149.00
IUUC-Rno-105200	Rattus norvegicus	47.40	1.00e-36	149.00
IUUC-Sha-107174	Sarcophilus harrisii	47.40	1.00e-36	150.00
IUUC-Ssl-108594	Sclerotinia sclerotiorum	36.36	2.00e-08	55.10
IUUC-Smo-109164	Selaginella moellendorffii	36.97	4.00e-33	136.00
IUUC-Sly-111158	Solanum lycopersicum	51.36	0.00e+00	1023.00
IUUC-Stu-112529	Solanum tuberosum	53.75	0.00e+00	648.00
IUUC-Sar-113503	Sorex araneus	47.40	1.00e-36	150.00
IUUC-Sre-115128	Sporisorium reilianum	30.39	1.00e-06	48.90
IUUC-Ssc-115509	Sus scrofa	44.16	1.00e-34	143.00
IUUC-Tgu-117047	Taeniopygia guttata	47.40	4.00e-37	151.00
IUUC-Tru-118328	Takifugu rubripes	46.75	1.00e-35	146.00
IUUC-Tsy-118953	Tarsius syrichta	48.92	5.00e-34	141.00
IUUC-Tni-119794	Tetraodon nigroviridis	45.45	3.00e-35	144.00
IUUC-Tre-122041	Trichoderma reesei	42.03	1.00e-12	68.90
IUUC-Tbe-127950	Tupaia belangeri	47.40	1.00e-36	149.00
IUUC-Ttr-128643	Tursiops truncatus	47.40	1.00e-36	149.00
IUUC-Uma-129405	Ustilago maydis	26.67	5.00e-06	46.60
IUUC-Vpa-130327	Vicugna pacos	30.22	5.00e-15	75.90
IUUC-Vvi-130889	Vitis vinifera	55.22	0.00e+00	1084.00
IUUC-Xtr-132838	Xenopus tropicalis	46.10	3.00e-36	147.00
IUUC-Xma-133393	Xiphophorus maculatus	48.05	3.00e-36	149.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence