iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017178

Ensembl Protein ID

Bra009155.1-P

UniProt Accession

M4CY58; M4CY58_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra009155	Bra009155.1	Bra009155.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-23	82.1	179	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd.tllvsGsdDgtikvWDlr 31
             + l++  s+ +ll++++dDgt+++WD++
   Q: 179  VLRVLDYsrSSrHLLLTAGDDGTVHLWDTT 208
           555677787666899*************64 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSHLVDPTWR LLAASGGDTV KLFDVSADSG DPCVLSYTPT PGSAVSSVKW NHTNLVVASA 60
GDDKKISLWW INGSSLGTVP VAGKDGGDSA EECLSAISFG RKGSKFIASG GTGQIVKIWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCACT TGGTGGACCC TACGTGGCGC CTCCTGGCGG CGAGCGGGGG AGATACGGTT 60
AAGCTATTCG ACGTATCCGC CGATTCCGGT GATCCCTGCG TCTTGAGCTA CACTCCGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005828--C:kinetochore microtubule
GO:0000919--P:cell plate assembly
GO:0009553--P:embryo sac development
GO:0009555--P:pollen development
GO:0032467--P:positive regulation of cytokinesis
GO:0060236--P:regulation of mitotic spindle organization
GO:2000694--P:regulation of phragmoplast microtubule organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	60.59	1.00e-82	300.00
IUUC-Apl-003870	Anas platyrhynchos	33.64	2.00e-39	157.00
IUUC-Aly-005931	Arabidopsis lyrata	74.81	0.00e+00	1115.00
IUUC-Ath-006681	Arabidopsis thaliana	73.79	0.00e+00	1093.00
IUUC-Bta-013389	Bos taurus	32.13	1.00e-40	161.00
IUUC-Bol-016282	Brassica oleracea	94.83	0.00e+00	1307.00
IUUC-Cpo-021697	Cavia porcellus	31.73	1.00e-39	157.00
IUUC-Csa-023620	Chlorocebus sabaeus	29.62	1.00e-40	160.00
IUUC-Eca-034230	Equus caballus	33.54	1.00e-39	157.00
IUUC-Fal-037557	Ficedula albicollis	31.97	8.00e-35	141.00
IUUC-Gga-040153	Gallus gallus	32.72	3.00e-38	152.00
IUUC-Gac-041385	Gasterosteus aculeatus	34.19	2.00e-33	137.00
IUUC-Lch-050561	Latimeria chalumnae	26.33	2.00e-17	84.30
IUUC-Laf-053880	Loxodonta africana	30.35	3.00e-36	146.00
IUUC-Mcc-054977	Macaca mulatta	30.16	1.00e-41	164.00
IUUC-Mga-060141	Meleagris gallopavo	33.56	5.00e-37	149.00
IUUC-Mmr-061201	Microcebus murinus	31.73	1.00e-39	157.00
IUUC-Mlu-067310	Myotis lucifugus	32.27	7.00e-39	155.00
IUUC-Ont-071675	Oreochromis niloticus	34.19	5.00e-35	142.00
IUUC-Ocu-074095	Oryctolagus cuniculus	31.73	1.00e-39	157.00
IUUC-Ola-086806	Oryzias latipes	33.23	6.00e-35	142.00
IUUC-Pan-092576	Papio anubis	30.16	2.00e-41	163.00
IUUC-Pfo-097142	Poecilia formosa	31.62	1.00e-35	144.00
IUUC-Pca-100217	Procavia capensis	28.61	7.00e-33	135.00
IUUC-Rno-104977	Rattus norvegicus	31.73	2.00e-38	153.00
IUUC-Smo-109328	Selaginella moellendorffii	42.33	2.00e-144	505.00
IUUC-Ssc-116242	Sus scrofa	32.69	3.00e-37	149.00
IUUC-Tgu-116765	Taeniopygia guttata	31.89	5.00e-37	149.00
IUUC-Tru-117738	Takifugu rubripes	30.73	2.00e-34	140.00
IUUC-Tni-120871	Tetraodon nigroviridis	32.49	1.00e-35	144.00
IUUC-Vpa-130324	Vicugna pacos	32.91	2.00e-40	160.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence