iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002046

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01002445

Gene Name

STRN3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000015829.1	ENSAMET00000017416.1	ENSAMEP00000016726.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-25	87.6	584	614
UBD/Beta-Prp	2.90e-54	184.4	573	793

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd..tllvsGsdDgtikvWDl 30
           Htd v++la+s+  + l+s+s Dgt+++W++
   Q: 584  HTDAVWGLAYSGikNQLLSCSADGTVRLWNP 614
           **********666689*************95 PP

UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsv..lslsfsp.sgdklvsGshdrtirvwdle 124
           ++  l  +l  h+++v+ + +s  ++ l+++s D+t+++w+++ + +c+ t++g+++    +s++f   +  ++v+  +     ++dle
   Q: 573  EPNVLAGTLVAHTDAVWGLAYSGIKNQLLSCSADGTVRLWNPQeKLPCICTYNGNKEHGipTSVDFIGcDPAHMVTSFNTGSTVIYDLE 661
           455678899*******************************887699*******7776641345566554449999999999999***** PP
   S: 125  tgqclee......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
           t q l           + +  +n vv+hp+  + ++++ Dr ++++d ktgk+++ +   h d+v+sl++d+ng +l+sgs+d +++lw
   Q: 662  TSQSLVMlssqvdSGLQSNNHINRVVSHPTLPVTITAHEDRHIKFFDNKTGKMIHSMVA-HLDAVTSLAVDPNGIYLMSGSHDCSIRLW 749
           *****999999773334555689999***99**************************98.***************************** PP
   S: 208  dlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsir 247
           +l +++cv++ ++h+    + +++v+f+p + +++s+++D   +
   Q: 750  NLDSKTCVQEITAHRkkldESIYDVAFHPSKAYIASAGADALAK 793
           ***************99999*******************97655 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MDELAGGGGG GPGMAAPPRQ QQGPGGNMSL SPGGNGAASG GGXXXAEGTG PAAGPELSRP 60
QQYTIPGILH YIQHEWARFE MERAHWEVER AELQARIAFL QGERKGQENL KKDLVRRIKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAGC TCGCCGGAGG CGGTGGTGGA GGCCCGGGGA TGGCGGCCCC TCCAAGGCAG 60
CAGCAGGGAC CTGGGGGGAA CATGAGCCTT TCGCCAGGGG GGAATGGAGC GGCGAGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:0000159--C:protein phosphatase type 2A complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003472	Anas platyrhynchos	93.50	0.00e+00	1237.00
IUUC-Aca-005286	Anolis carolinensis	93.02	0.00e+00	1289.00
IUUC-Afl-008585	Aspergillus flavus	27.42	4.00e-36	146.00
IUUC-Ani-009405	Aspergillus nidulans	30.38	8.00e-36	145.00
IUUC-Aor-009982	Aspergillus oryzae	27.42	6.00e-36	145.00
IUUC-Bgr-012143	Blumeria graminis	26.56	6.00e-35	142.00
IUUC-Bta-012797	Bos taurus	96.24	0.00e+00	1379.00
IUUC-Bci-013742	Botrytis cinerea	25.62	2.00e-35	144.00
IUUC-Cel-018443	Caenorhabditis elegans	39.96	6.00e-102	365.00
IUUC-Cja-018786	Callithrix jacchus	96.50	0.00e+00	1351.00
IUUC-Cfa-021098	Canis familiaris	94.91	0.00e+00	1333.00
IUUC-Cpo-022357	Cavia porcellus	94.09	0.00e+00	1309.00
IUUC-Csa-023725	Chlorocebus sabaeus	96.63	0.00e+00	1352.00
IUUC-Cho-024338	Choloepus hoffmanni	91.18	0.00e+00	1171.00
IUUC-Cin-025167	Ciona intestinalis	49.34	0.00e+00	654.00
IUUC-Csv-026143	Ciona savignyi	51.33	0.00e+00	671.00
IUUC-Cgl-026487	Colletotrichum gloeosporioides	26.13	1.00e-31	131.00
IUUC-Cne-026783	Cryptococcus neoformans	32.79	2.00e-57	217.00
IUUC-Dno-029926	Dasypus novemcinctus	96.50	0.00e+00	1353.00
IUUC-Dse-031486	Dothistroma septosporum	27.71	3.00e-38	153.00
IUUC-Dme-032158	Drosophila melanogaster	63.86	2.00e-144	506.00
IUUC-Ete-032770	Echinops telfairi	83.54	0.00e+00	1151.00
IUUC-Eca-033309	Equus caballus	96.64	0.00e+00	1341.00
IUUC-Eeu-034939	Erinaceus europaeus	93.19	0.00e+00	985.00
IUUC-Fca-035719	Felis catus	95.20	0.00e+00	1246.00
IUUC-Fal-037408	Ficedula albicollis	93.54	0.00e+00	1185.00
IUUC-Fox-037678	Fusarium oxysporum	26.67	5.00e-36	146.00
IUUC-Fso-038364	Fusarium solani	26.80	2.00e-37	150.00
IUUC-Gmo-039653	Gadus morhua	63.23	0.00e+00	866.00
IUUC-Ggr-039846	Gaeumannomyces graminis	26.24	1.00e-34	140.00
IUUC-Gga-041218	Gallus gallus	94.36	0.00e+00	1326.00
IUUC-Gac-042142	Gasterosteus aculeatus	72.30	0.00e+00	1057.00
IUUC-Ggo-045607	Gorilla gorilla	77.76	0.00e+00	1004.00
IUUC-Hsa-045717	Homo sapiens	96.49	0.00e+00	1361.00
IUUC-Itr-048177	Ictidomys tridecemlineatus	96.15	0.00e+00	947.00
IUUC-Lch-050441	Latimeria chalumnae	89.26	0.00e+00	1298.00
IUUC-Loc-052193	Lepisosteus oculatus	84.89	0.00e+00	1245.00
IUUC-Lma-053183	Leptosphaeria maculans	28.60	2.00e-39	157.00
IUUC-Laf-053964	Loxodonta africana	95.86	0.00e+00	1330.00
IUUC-Mcc-055639	Macaca mulatta	96.63	0.00e+00	1353.00
IUUC-Mor-057148	Magnaporthe oryzae	42.31	1.00e-17	85.10
IUUC-Mpo-057337	Magnaporthe poae	25.33	1.00e-30	128.00
IUUC-Mla-058988	Melampsora laricipopulina	34.84	6.00e-65	242.00
IUUC-Mmr-061084	Microcebus murinus	96.90	0.00e+00	1358.00
IUUC-Mdo-063016	Monodelphis domestica	95.22	0.00e+00	1360.00
IUUC-Mmu-063914	Mus musculus	95.69	0.00e+00	1357.00
IUUC-Mpu-066348	Mustela putorius furo	98.96	0.00e+00	765.00
IUUC-Mlu-067303	Myotis lucifugus	94.35	0.00e+00	1296.00
IUUC-Nle-070032	Nomascus leucogenys	96.49	0.00e+00	1361.00
IUUC-Opr-070496	Ochotona princeps	91.12	0.00e+00	653.00
IUUC-Ont-072075	Oreochromis niloticus	71.90	0.00e+00	1058.00
IUUC-Oan-072822	Ornithorhynchus anatinus	93.68	0.00e+00	1187.00
IUUC-Ocu-073876	Oryctolagus cuniculus	93.71	0.00e+00	1313.00
IUUC-Ola-086321	Oryzias latipes	69.48	0.00e+00	996.00
IUUC-Oga-088045	Otolemur garnettii	96.89	0.00e+00	1353.00
IUUC-Oar-089737	Ovis aries	96.45	0.00e+00	1269.00
IUUC-Ptr-090871	Pan troglodytes	96.44	0.00e+00	1281.00
IUUC-Pan-092139	Papio anubis	96.02	0.00e+00	1253.00
IUUC-Psi-093424	Pelodiscus sinensis	93.61	0.00e+00	1255.00
IUUC-Pma-094286	Petromyzon marinus	70.65	0.00e+00	682.00
IUUC-Pno-094905	Phaeosphaeria nodorum	28.16	2.00e-35	144.00
IUUC-Pfo-096564	Poecilia formosa	73.25	0.00e+00	1077.00
IUUC-Pab-098626	Pongo abelii	96.49	0.00e+00	1398.00
IUUC-Pva-102445	Pteropus vampyrus	90.09	0.00e+00	1246.00
IUUC-Ptt-103828	Puccinia triticina	37.12	9.00e-49	189.00
IUUC-Pte-104374	Pyrenophora teres	27.86	3.00e-33	137.00
IUUC-Pyt-104568	Pyrenophora triticirepentis	27.42	2.00e-36	147.00
IUUC-Rno-105999	Rattus norvegicus	93.45	0.00e+00	1373.00
IUUC-Sha-106786	Sarcophilus harrisii	93.75	0.00e+00	1261.00
IUUC-Ssl-108495	Sclerotinia sclerotiorum	26.30	3.00e-35	143.00
IUUC-Sar-113296	Sorex araneus	78.06	0.00e+00	871.00
IUUC-Tgu-117199	Taeniopygia guttata	89.97	0.00e+00	1159.00
IUUC-Tsy-119356	Tarsius syrichta	80.69	0.00e+00	939.00
IUUC-Tre-122113	Trichoderma reesei	28.26	2.00e-38	154.00
IUUC-Tvi-122312	Trichoderma virens	26.46	2.00e-36	147.00
IUUC-Tbe-127691	Tupaia belangeri	78.96	0.00e+00	758.00
IUUC-Ttr-128600	Tursiops truncatus	88.26	0.00e+00	1236.00
IUUC-Vda-129673	Verticillium dahliae	25.71	7.00e-31	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence