iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-11	42.5	47	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd...tllvsGsdDgtikvWDlrtgvll 36
           Ht++vt++     sd    + +++s Dg+i++W+++  +ll
   Q: 47   HTAPVTSVIVdpsSDetvSYCWTSSLDGKIRIWEFSAPKLL 87
           9******96698955445669*************8776665 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MIRGGRNNIT SAPAFSKDAK KLLLCTANTV SVYSVATGLK ITSLEDHTAP VTSVIVDPSS 60
DETVSYCWTS SLDGKIRIWE FSAPKLLKIF DTHLPIHSLV MIPAQVSHSV IAYVSVEDYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCAATTTGG TCACAGACAT AATTTCCTCG AAAACTGGGT ACATTGTAAT ATTTCGTCGG 60
AAAAACGTCG CAAAATCTAA TTTTTAATCG CCGAGTAAGA TGTTTGCGTC TTCTCAGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001772	Ailuropoda melanoleuca	24.19	2.00e-41	164.00
IUUC-Apl-004225	Anas platyrhynchos	23.76	7.00e-36	144.00
IUUC-Aly-006353	Arabidopsis lyrata	90.64	0.00e+00	1373.00
IUUC-Bol-015084	Brassica oleracea	67.70	0.00e+00	932.00
IUUC-Cfa-020826	Canis familiaris	23.99	1.00e-41	164.00
IUUC-Cpo-022075	Cavia porcellus	24.37	2.00e-46	180.00
IUUC-Csa-023922	Chlorocebus sabaeus	24.82	5.00e-44	172.00
IUUC-Cho-025070	Choloepus hoffmanni	25.00	9.00e-41	161.00
IUUC-Dno-029393	Dasypus novemcinctus	23.41	2.00e-35	143.00
IUUC-Dme-031625	Drosophila melanogaster	24.73	6.00e-31	129.00
IUUC-Fca-036473	Felis catus	24.15	3.00e-45	176.00
IUUC-Gga-040173	Gallus gallus	25.34	1.00e-23	103.00
IUUC-Hsa-045976	Homo sapiens	24.68	1.00e-43	171.00
IUUC-Mcc-055400	Macaca mulatta	24.82	2.00e-44	173.00
IUUC-Mmr-061240	Microcebus murinus	24.47	2.00e-44	174.00
IUUC-Mdo-062461	Monodelphis domestica	25.08	1.00e-45	177.00
IUUC-Mpu-066642	Mustela putorius furo	24.71	5.00e-42	165.00
IUUC-Mlu-067113	Myotis lucifugus	23.30	4.00e-35	142.00
IUUC-Nle-069700	Nomascus leucogenys	24.54	1.00e-43	170.00
IUUC-Oan-073397	Ornithorhynchus anatinus	24.42	1.00e-12	66.20
IUUC-Ocu-074934	Oryctolagus cuniculus	24.41	2.00e-42	167.00
IUUC-Oga-087932	Otolemur garnettii	25.10	6.00e-44	172.00
IUUC-Ptr-090836	Pan troglodytes	24.68	1.00e-43	171.00
IUUC-Pab-098646	Pongo abelii	24.68	1.00e-43	171.00
IUUC-Pva-103237	Pteropus vampyrus	26.56	6.00e-22	99.00
IUUC-Tbe-127376	Tupaia belangeri	29.55	7.00e-20	91.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence