iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-111933

Ensembl Protein ID

PGSC0003DMT400073807

UniProt Accession

M1CSP7; M1CSP7_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400028676	PGSC0003DMT400073807	PGSC0003DMT400073807
PGSC0003DMG400028676	PGSC0003DMT400073808	PGSC0003DMT400073808
PGSC0003DMG400028676	PGSC0003DMT400073809	PGSC0003DMT400073809

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-19	68.5	63	99

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H++ v++l+f ++  +l+sG+d g + +W+l++ ++ 
   Q: 63   HSGAVNALRFsPSgEHLASGADGGELIIWRLHSSDDS 99
           99*********666*****************998775 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKGGTVQINW HDSKPVLCLD FHHLTGVIAT GGADYDIKMW VINSEENEKK APSVTYQASL 60
SYHSGAVNAL RFSPSGEHLA SGADGGELII WRLHSSDDSK TWKVLKTLSF HRKDVLDLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGGTG GTACAGTTCA GATCAATTGG CACGACAGCA AGCCTGTTTT GTGCCTTGAT 60
TTTCACCACC TCACCGGCGT TATTGCTACT GGTGGCGCCG ACTATGACAT CAAGGTTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	55.17	2.00e-154	538.00
IUUC-Aml-001755	Ailuropoda melanoleuca	38.20	5.00e-78	284.00
IUUC-Atr-002674	Amborella trichopoda	63.16	3.00e-170	590.00
IUUC-Apl-003701	Anas platyrhynchos	38.48	1.00e-79	289.00
IUUC-Aca-004692	Anolis carolinensis	39.07	5.00e-81	293.00
IUUC-Aly-006286	Arabidopsis lyrata	62.22	1.00e-174	604.00
IUUC-Ath-007683	Arabidopsis thaliana	62.68	2.00e-176	610.00
IUUC-Ago-007940	Ashbya gossypii	34.05	1.00e-60	226.00
IUUC-Acl-008070	Aspergillus clavatus	39.49	4.00e-36	145.00
IUUC-Afl-008414	Aspergillus flavus	40.00	5.00e-37	148.00
IUUC-Ani-009399	Aspergillus nidulans	39.49	3.00e-36	145.00
IUUC-Ang-009650	Aspergillus niger	38.24	3.00e-35	142.00
IUUC-Aor-009937	Aspergillus oryzae	40.00	5.00e-37	148.00
IUUC-Ame-011094	Astyanax mexicanus	40.49	4.00e-84	304.00
IUUC-Bta-013423	Bos taurus	37.53	5.00e-78	283.00
IUUC-Bci-013847	Botrytis cinerea	36.36	9.00e-34	137.00
IUUC-Bdi-014860	Brachypodium distachyon	60.40	1.00e-150	525.00
IUUC-Bol-016603	Brassica oleracea	60.60	7.00e-171	592.00
IUUC-Bra-017175	Brassica rapa	61.71	5.00e-167	579.00
IUUC-Cel-018272	Caenorhabditis elegans	30.65	9.00e-42	163.00
IUUC-Cja-019558	Callithrix jacchus	39.21	1.00e-80	292.00
IUUC-Cfa-020900	Canis familiaris	37.74	7.00e-77	280.00
IUUC-Cpo-022054	Cavia porcellus	38.26	4.00e-70	258.00
IUUC-Csa-023850	Chlorocebus sabaeus	39.25	2.00e-80	291.00
IUUC-Cho-024510	Choloepus hoffmanni	31.14	1.00e-36	146.00
IUUC-Cin-025178	Ciona intestinalis	36.38	1.00e-74	272.00
IUUC-Cne-027015	Cryptococcus neoformans	32.66	2.00e-32	133.00
IUUC-Cme-027136	Cyanidioschyzon merolae	33.26	1.00e-57	216.00
IUUC-Dre-027879	Danio rerio	37.25	2.00e-83	301.00
IUUC-Dno-029335	Dasypus novemcinctus	37.99	4.00e-78	284.00
IUUC-Dor-030520	Dipodomys ordii	30.00	2.00e-49	189.00
IUUC-Dse-031566	Dothistroma septosporum	37.88	2.00e-33	136.00
IUUC-Dme-031838	Drosophila melanogaster	39.44	3.00e-81	295.00
IUUC-Eca-033563	Equus caballus	38.75	2.00e-80	292.00
IUUC-Fca-036052	Felis catus	38.73	3.00e-79	288.00
IUUC-Fal-037080	Ficedula albicollis	40.44	2.00e-82	298.00
IUUC-Gmo-039461	Gadus morhua	42.42	3.00e-66	244.00
IUUC-Gga-041133	Gallus gallus	39.32	2.00e-81	295.00
IUUC-Gac-041769	Gasterosteus aculeatus	38.98	1.00e-81	296.00
IUUC-Gma-043339	Glycine max	65.75	1.00e-161	561.00
IUUC-Ggo-044561	Gorilla gorilla	39.25	2.00e-80	291.00
IUUC-Hsa-046150	Homo sapiens	39.15	8.00e-81	293.00
IUUC-Hvu-047792	Hordeum vulgare	66.67	1.00e-105	374.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	39.07	2.00e-80	291.00
IUUC-Kpa-049397	Komagataella pastoris	37.28	7.00e-70	256.00
IUUC-Lch-050365	Latimeria chalumnae	33.50	2.00e-52	199.00
IUUC-Lpe-050875	Leersia perrieri	60.82	1.00e-155	541.00
IUUC-Loc-052770	Lepisosteus oculatus	39.95	1.00e-82	299.00
IUUC-Lma-053291	Leptosphaeria maculans	34.08	5.00e-36	145.00
IUUC-Laf-053505	Loxodonta africana	38.33	1.00e-79	289.00
IUUC-Mcc-054803	Macaca mulatta	39.25	2.00e-80	291.00
IUUC-Meu-056578	Macropus eugenii	39.18	2.00e-37	149.00
IUUC-Mtr-058066	Medicago truncatula	63.32	8.00e-163	565.00
IUUC-Mga-059735	Meleagris gallopavo	39.08	3.00e-81	294.00
IUUC-Mmr-061343	Microcebus murinus	38.75	8.00e-80	290.00
IUUC-Mdo-062065	Monodelphis domestica	39.11	5.00e-80	290.00
IUUC-Mmu-063501	Mus musculus	38.57	5.00e-80	290.00
IUUC-Mac-064864	Musa acuminata	69.35	1.00e-170	591.00
IUUC-Mpu-066549	Mustela putorius furo	38.48	4.00e-78	284.00
IUUC-Mlu-067121	Myotis lucifugus	38.73	3.00e-82	298.00
IUUC-Nle-069854	Nomascus leucogenys	39.15	2.00e-80	291.00
IUUC-Opr-070803	Ochotona princeps	35.68	1.00e-70	259.00
IUUC-Ont-071642	Oreochromis niloticus	40.44	3.00e-84	304.00
IUUC-Oan-073675	Ornithorhynchus anatinus	39.41	8.00e-81	293.00
IUUC-Ocu-073863	Oryctolagus cuniculus	38.40	4.00e-79	286.00
IUUC-Oba-075682	Oryza barthii	65.71	4.00e-147	513.00
IUUC-Obr-076039	Oryza brachyantha	55.40	2.00e-155	540.00
IUUC-Ogu-078021	Oryza glumaepatula	67.80	4.00e-154	536.00
IUUC-Oin-079908	Oryza indica	58.61	7.00e-126	442.00
IUUC-Olo-081063	Oryza longistaminata	68.06	9.00e-155	538.00
IUUC-Ome-081930	Oryza meridionalis	67.54	9.00e-154	535.00
IUUC-Oni-082547	Oryza nivara	67.54	2.00e-153	534.00
IUUC-Opu-084089	Oryza punctata	67.28	2.00e-151	528.00
IUUC-Oru-084844	Oryza rufipogon	67.80	5.00e-154	536.00
IUUC-Osa-085582	Oryza sativa	67.80	5.00e-154	536.00
IUUC-Ola-087187	Oryzias latipes	40.24	8.00e-85	306.00
IUUC-Olu-087792	Ostreococcus lucimarinus	36.09	2.00e-71	261.00
IUUC-Oga-088390	Otolemur garnettii	38.75	2.00e-79	288.00
IUUC-Oar-089740	Ovis aries	37.44	4.00e-74	271.00
IUUC-Ptr-091581	Pan troglodytes	39.15	1.00e-80	293.00
IUUC-Pan-092258	Papio anubis	36.01	9.00e-69	253.00
IUUC-Psi-093761	Pelodiscus sinensis	39.31	7.00e-81	293.00
IUUC-Ppa-095428	Physcomitrella patens	48.22	5.00e-124	437.00
IUUC-Pfo-097357	Poecilia formosa	39.95	2.00e-84	305.00
IUUC-Pab-098520	Pongo abelii	39.15	3.00e-80	291.00
IUUC-Pop-099331	Populus trichocarpa	67.75	2.00e-180	624.00
IUUC-Ppe-101548	Prunus persica	70.67	0.00e+00	638.00
IUUC-Pva-103243	Pteropus vampyrus	40.70	4.00e-72	264.00
IUUC-Pte-104247	Pyrenophora teres	34.33	6.00e-36	144.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	34.33	6.00e-36	144.00
IUUC-Rno-105202	Rattus norvegicus	38.33	3.00e-80	291.00
IUUC-Sce-106250	Saccharomyces cerevisiae	33.48	7.00e-69	253.00
IUUC-Sha-107036	Sarcophilus harrisii	38.77	7.00e-81	293.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	35.85	1.00e-73	269.00
IUUC-Spo-108050	Schizosaccharomyces pombe	33.26	2.00e-62	231.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	36.36	2.00e-33	136.00
IUUC-Sit-109838	Setaria italica	60.14	2.00e-151	527.00
IUUC-Sly-110872	Solanum lycopersicum	94.71	0.00e+00	886.00
IUUC-Sbi-114587	Sorghum bicolor	62.81	4.00e-150	523.00
IUUC-Ssc-115462	Sus scrofa	39.55	2.00e-81	295.00
IUUC-Tgu-117186	Taeniopygia guttata	39.32	5.00e-82	297.00
IUUC-Tru-118310	Takifugu rubripes	37.94	7.00e-86	310.00
IUUC-Tsy-118927	Tarsius syrichta	45.16	1.00e-27	116.00
IUUC-Tni-120832	Tetraodon nigroviridis	38.14	1.00e-82	299.00
IUUC-Tca-121584	Theobroma cacao	67.97	0.00e+00	632.00
IUUC-Tae-123476	Triticum aestivum	55.36	4.00e-155	540.00
IUUC-Tur-126239	Triticum urartu	55.17	2.00e-154	538.00
IUUC-Tme-127108	Tuber melanosporum	34.34	6.00e-65	240.00
IUUC-Ttr-129010	Tursiops truncatus	40.00	6.00e-80	290.00
IUUC-Vpa-130374	Vicugna pacos	34.57	7.00e-25	107.00
IUUC-Vvi-131136	Vitis vinifera	76.67	0.00e+00	643.00
IUUC-Xtr-132141	Xenopus tropicalis	39.66	3.00e-81	294.00
IUUC-Xma-133980	Xiphophorus maculatus	40.92	1.00e-85	309.00
IUUC-Yli-134457	Yarrowia lipolytica	36.15	1.00e-32	133.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence