iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115312

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU929537

Gene Name

USP43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000017995.2	ENSSSCT00000019584.2	ENSSSCP00000019065.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-91	307.5	103	712

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           +GlkN+gNtC+mN+v+QcLsn+  l+e+l     ++++ +      +e++++l+ l+++lw+++ +     e+++a++k+ ++f+g++q
   Q: 103  QGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAVPGR------AEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQ 185
           6*****************************9888888876......69***************************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsde..aeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpv 176
           +Da Efl +lld+++e+l+ +++ p+ ++   + +++s++  +++ + + ++s+++  Fq q++s+++c++c ++s++++pfl +slp+
   Q: 186  HDALEFLLWLLDRVHEDLEGSARGPTADKLLPEARKTSENppSPSAQLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPI 274
           ******************9977777777766665555555558889999999************************************* PP
   S: 177  pgkeetkke................................................................................ 185
           p ++++ ++                                                                                
   Q: 275  PLRQTRFLSvtlvflsqsqrflrvglavpilstvaalrkmvaeeggipaaevilvelypnglqrsffdeedlntiaegdnvyafqapps 363
           ****98888******************************************************************************** PP
   S: 186  ......................................................................................... 185
                                                                                                    
   Q: 364  pgqemlsacppglpvsprlaaregqrlsrpvpgenkvlilfcnlvgsgqqasrfgppfliredraiswaqlqqsilnkvrylmkgeapv 452
           ***************************************************************************************** PP
   S: 186  ......................................................................................... 185
                                                                                                    
   Q: 453  qnpgslfsirvvglslacsylspqdsrplchwavdralhlrrpggpshvklavewdsgtqerlfgsvqeervqdadsvwqqqqahqqhs 541
           ***************************************************************************************** PP
   S: 186  .slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfctspeekq 272
            +l++c++ +tkee+l +++++ c++c+++q+ + kl+l++lP++Li+hLkRf   + +++r+k+++ v+fpl+ Ld++p++++++++ 
   Q: 542  cTLDECFQFYTKEEQLAQDDAWRCPHCQALQQGVVKLSLWTLPDILIIHLKRF--CQVGERRNKLSTLVKFPLSgLDMAPHVAQRSTGP 628
           *****************************************************..88899************************88777 PP
   S: 273  ke....................kkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetgstaYvlfYkrr 338
           k                     +  Y+L+av++H+Gsl++GHY+ay++n  +g+W+ +dDs+V+++ e+ev++   + aY+lfY++r
   Q: 629  KGapgpwpswkqpaclptsyppDFLYDLYAVCNHQGSLQGGHYTAYCRNsLDGQWYSYDDSTVEPLLEDEVNT---RGAYILFYQKR 712
           6689999999999999999999***************************55788*******************...********985 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MDPGAGAAAA EGPPAPRPRR RRSLRRLFTR FLLALGSRSR PGDSPSRPRS QPPPGHGDGD 60
GEGGFASAPG ADPAAPGSPG EERPPRPQPQ LPAGDGARPP GAQGLKNHGN TCFMNAVVQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCCTTGGC TCCGCCTCCG CCCCGCCCCG CCCGGTCCGG TACACCTGGC CCGCAGGTAG 60
CCGGCGCCCT GGTGCTTCTC GGAGCCTGGA AGGGCCTGGT GACCGCTCCT CCGCCCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0005634--C:nucleus
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ssc:100515447

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001922	Ailuropoda melanoleuca	77.46	0.00e+00	1435.00
IUUC-Aca-004436	Anolis carolinensis	52.26	0.00e+00	767.00
IUUC-Ame-011153	Astyanax mexicanus	49.27	0.00e+00	858.00
IUUC-Bta-013560	Bos taurus	83.91	0.00e+00	1651.00
IUUC-Cel-018710	Caenorhabditis elegans	25.48	8.00e-43	169.00
IUUC-Cja-018737	Callithrix jacchus	78.36	0.00e+00	1500.00
IUUC-Cfa-020347	Canis familiaris	79.50	0.00e+00	1474.00
IUUC-Csa-023656	Chlorocebus sabaeus	80.00	0.00e+00	1535.00
IUUC-Cho-024864	Choloepus hoffmanni	71.14	0.00e+00	890.00
IUUC-Csv-026086	Ciona savignyi	38.67	2.00e-120	426.00
IUUC-Dre-028066	Danio rerio	49.30	0.00e+00	881.00
IUUC-Dno-028855	Dasypus novemcinctus	71.77	0.00e+00	1317.00
IUUC-Dor-030475	Dipodomys ordii	86.26	0.00e+00	700.00
IUUC-Dme-032088	Drosophila melanogaster	37.22	2.00e-112	400.00
IUUC-Eca-034147	Equus caballus	86.81	0.00e+00	1439.00
IUUC-Eeu-034703	Erinaceus europaeus	73.67	2.00e-143	503.00
IUUC-Fca-036550	Felis catus	75.87	0.00e+00	1258.00
IUUC-Gmo-039479	Gadus morhua	51.64	0.00e+00	631.00
IUUC-Gga-041092	Gallus gallus	52.53	0.00e+00	636.00
IUUC-Gac-042087	Gasterosteus aculeatus	50.42	0.00e+00	853.00
IUUC-Ggo-045171	Gorilla gorilla	80.17	0.00e+00	1534.00
IUUC-Hsa-045961	Homo sapiens	80.33	0.00e+00	1544.00
IUUC-Itr-048673	Ictidomys tridecemlineatus	68.77	2.00e-175	608.00
IUUC-Lch-050332	Latimeria chalumnae	48.59	1.00e-174	607.00
IUUC-Loc-052852	Lepisosteus oculatus	62.66	0.00e+00	911.00
IUUC-Laf-054033	Loxodonta africana	76.92	0.00e+00	1463.00
IUUC-Mcc-055431	Macaca mulatta	80.00	0.00e+00	1550.00
IUUC-Mmr-061035	Microcebus murinus	81.29	0.00e+00	1516.00
IUUC-Mdo-062172	Monodelphis domestica	65.97	0.00e+00	939.00
IUUC-Mmu-063966	Mus musculus	74.93	0.00e+00	1440.00
IUUC-Mpu-066307	Mustela putorius furo	78.15	0.00e+00	1382.00
IUUC-Nle-070172	Nomascus leucogenys	79.88	0.00e+00	1538.00
IUUC-Opr-070499	Ochotona princeps	70.85	0.00e+00	1330.00
IUUC-Ont-071920	Oreochromis niloticus	51.28	0.00e+00	907.00
IUUC-Oan-073052	Ornithorhynchus anatinus	46.12	2.00e-170	592.00
IUUC-Ocu-074014	Oryctolagus cuniculus	81.14	0.00e+00	1170.00
IUUC-Ola-086360	Oryzias latipes	59.70	0.00e+00	883.00
IUUC-Oga-088202	Otolemur garnettii	78.42	0.00e+00	1500.00
IUUC-Oar-089819	Ovis aries	84.03	0.00e+00	1600.00
IUUC-Ptr-091076	Pan troglodytes	80.33	0.00e+00	1545.00
IUUC-Pan-092248	Papio anubis	79.71	0.00e+00	1526.00
IUUC-Pfo-096534	Poecilia formosa	48.19	0.00e+00	823.00
IUUC-Pab-098453	Pongo abelii	77.52	0.00e+00	1474.00
IUUC-Pca-100290	Procavia capensis	59.83	0.00e+00	681.00
IUUC-Pva-102317	Pteropus vampyrus	73.03	0.00e+00	1380.00
IUUC-Rno-104948	Rattus norvegicus	74.03	0.00e+00	1302.00
IUUC-Sha-106558	Sarcophilus harrisii	58.05	0.00e+00	1095.00
IUUC-Sar-113105	Sorex araneus	61.80	0.00e+00	993.00
IUUC-Tru-117995	Takifugu rubripes	61.28	0.00e+00	878.00
IUUC-Tsy-119325	Tarsius syrichta	73.81	0.00e+00	729.00
IUUC-Tni-120517	Tetraodon nigroviridis	57.94	0.00e+00	852.00
IUUC-Tbe-127439	Tupaia belangeri	63.50	4.00e-116	412.00
IUUC-Ttr-128829	Tursiops truncatus	77.19	0.00e+00	1487.00
IUUC-Vpa-130306	Vicugna pacos	83.38	0.00e+00	647.00
IUUC-Xtr-132509	Xenopus tropicalis	52.55	0.00e+00	633.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence