iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016207

Ensembl Protein ID

Bo4g181820.1

UniProt Accession

A0A0D3C3W4; A0A0D3C3W4_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g181820	Bo4g181820.1	Bo4g181820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-16	60.9	2	68
E3 adaptor/Cullin RING/DCX/DWD	9.40e-26	90.3	262	292
UBD/Beta-Prp	1.10e-45	157.6	219	432

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e++++Pvv+  sG  ++r+ Ie+++ ++gk cPvt++plt +d+vP +t + +  + +++ s
   Q: 2    NCAISGEVPEEPVVSTkSGLLFERRLIERHILDYGK-CPVTGEPLTIDDVVPIKTGKVIKPKPVHTAS 68
           7*************999*******************.********************99999988876 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  d +l++++s D+t+++W+
   Q: 262  GHSKKVTSVKFvGDsDLVLTASADKTVRIWR 292
           8***********666***************6 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdl...etgqcleetlsghdgvvnc 142
           + +++++ ++++ +++++++tg+ D+t+ ++d  +g++++tl+gh+++v+s++f  ++d ++++s+d+t+r+w     +++ c + tl+ h++ v+ 
   Q: 219  KTNKPGICSMDILHSKDVIATGGVDATAVIFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRDsgdRNYACGH-TLNDHSAEVRA 314
           5567777778888887788888888888888888888888888888888888888877888888888888887541114555555.78888888888 PP
   S: 143  vvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderl 237
           v+vh +++++vs+slD+t  ++dl++g +l + +    ++v  ++  f+++g  l +g   + vk+wd++++  v ++ ght  v+s+ fs+n+ +l
   Q: 315  VTVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSD-ESEKVDYTAaaFHPDGLILGTGTSQSIVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFL 410
           88888888888888888888888888888888754.4444444444588888888888888888888888777788888888888888888777777 PP
   S: 238  vsgssDgsiriWdlrsgdllktl 260
           +++++D  +r+Wdlr+  + k++
   Q: 411  ATAAED-GVRLWDLRKLRNFKSF 432
           666644.4678887776555544 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MNCAISGEVP EEPVVSTKSG LLFERRLIER HILDYGKCPV TGEPLTIDDV VPIKTGKVIK 60
PKPVHTASIP GLLGTFQNEW DGLMLSNFAL EQQLHTARQE LSHALYQHDS ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTGTG CAAGTAAATC TCTTTCTTTT TCTCCCCCAA TATGCCGATT TAGGTTTTTT 60
TTTTAATTGA TTAGTGACGT CACTGCCGTC TTTGTTCCAT ACAGTTTCCG GAGAAGTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001230	Ailuropoda melanoleuca	44.81	7.00e-108	384.00
IUUC-Atr-002594	Amborella trichopoda	69.35	0.00e+00	759.00
IUUC-Apl-003686	Anas platyrhynchos	42.17	1.00e-80	293.00
IUUC-Aca-005272	Anolis carolinensis	44.95	3.00e-114	404.00
IUUC-Aly-006002	Arabidopsis lyrata	94.46	0.00e+00	939.00
IUUC-Ath-007696	Arabidopsis thaliana	93.90	0.00e+00	1004.00
IUUC-Acl-008335	Aspergillus clavatus	32.24	9.00e-60	224.00
IUUC-Afl-008527	Aspergillus flavus	33.53	3.00e-66	245.00
IUUC-Afu-008957	Aspergillus fumigatus	34.26	5.00e-71	261.00
IUUC-Ani-009280	Aspergillus nidulans	34.75	3.00e-64	239.00
IUUC-Aor-009905	Aspergillus oryzae	33.33	2.00e-68	253.00
IUUC-Ame-011561	Astyanax mexicanus	42.31	2.00e-42	166.00
IUUC-Bta-013242	Bos taurus	45.35	8.00e-114	403.00
IUUC-Bdi-014896	Brachypodium distachyon	71.62	0.00e+00	783.00
IUUC-Cel-018271	Caenorhabditis elegans	39.73	1.00e-102	366.00
IUUC-Cja-019879	Callithrix jacchus	45.45	5.00e-113	401.00
IUUC-Cfa-020175	Canis familiaris	45.35	7.00e-114	404.00
IUUC-Cpo-022379	Cavia porcellus	45.35	1.00e-113	403.00
IUUC-Csa-023500	Chlorocebus sabaeus	45.54	3.00e-114	405.00
IUUC-Cho-025065	Choloepus hoffmanni	37.90	7.00e-44	170.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	32.75	5.00e-62	231.00
IUUC-Dre-028187	Danio rerio	44.08	8.00e-112	397.00
IUUC-Dno-029453	Dasypus novemcinctus	45.54	4.00e-114	404.00
IUUC-Dor-030150	Dipodomys ordii	43.72	6.00e-40	158.00
IUUC-Dse-031220	Dothistroma septosporum	34.53	4.00e-64	238.00
IUUC-Dme-031906	Drosophila melanogaster	45.95	7.00e-112	397.00
IUUC-Eca-033478	Equus caballus	45.35	1.00e-113	402.00
IUUC-Eeu-034974	Erinaceus europaeus	44.84	1.00e-74	273.00
IUUC-Fca-036194	Felis catus	45.14	1.00e-112	399.00
IUUC-Fal-037417	Ficedula albicollis	45.56	5.00e-114	404.00
IUUC-Fox-037922	Fusarium oxysporum	30.68	1.00e-58	220.00
IUUC-Fso-038256	Fusarium solani	31.46	4.00e-64	238.00
IUUC-Gmo-038713	Gadus morhua	44.47	2.00e-114	405.00
IUUC-Gga-041143	Gallus gallus	46.12	3.00e-115	408.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.96	1.00e-114	406.00
IUUC-Gma-043635	Glycine max	76.15	0.00e+00	834.00
IUUC-Ggo-045262	Gorilla gorilla	45.54	3.00e-114	405.00
IUUC-Hsa-046036	Homo sapiens	45.54	3.00e-114	405.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	45.54	1.00e-112	399.00
IUUC-Kpa-049195	Komagataella pastoris	42.55	4.00e-20	92.40
IUUC-Lch-050105	Latimeria chalumnae	45.17	2.00e-114	405.00
IUUC-Lpe-050976	Leersia perrieri	71.15	0.00e+00	769.00
IUUC-Loc-052042	Lepisosteus oculatus	40.42	8.00e-78	284.00
IUUC-Lma-053143	Leptosphaeria maculans	34.93	3.00e-65	243.00
IUUC-Laf-053451	Loxodonta africana	44.09	4.00e-111	394.00
IUUC-Mcc-055786	Macaca mulatta	45.54	3.00e-114	405.00
IUUC-Meu-056161	Macropus eugenii	44.83	3.00e-51	195.00
IUUC-Mor-057215	Magnaporthe oryzae	34.23	4.00e-58	218.00
IUUC-Mtr-057756	Medicago truncatula	74.56	0.00e+00	811.00
IUUC-Mla-059085	Melampsora laricipopulina	36.07	1.00e-80	293.00
IUUC-Mga-060158	Meleagris gallopavo	45.09	2.00e-100	358.00
IUUC-Mvi-060441	Microbotryum violaceum	35.78	7.00e-76	277.00
IUUC-Mmr-061085	Microcebus murinus	45.54	3.00e-114	405.00
IUUC-Mdo-061804	Monodelphis domestica	45.54	4.00e-114	404.00
IUUC-Mmu-063608	Mus musculus	43.55	4.00e-110	391.00
IUUC-Mac-064972	Musa acuminata	73.36	0.00e+00	780.00
IUUC-Mpu-065700	Mustela putorius furo	45.35	6.00e-114	404.00
IUUC-Mlu-068223	Myotis lucifugus	43.93	5.00e-110	390.00
IUUC-Nfi-068504	Neosartorya fischeri	34.46	2.00e-71	263.00
IUUC-Ncr-068729	Neurospora crassa	31.94	3.00e-60	225.00
IUUC-Nle-069754	Nomascus leucogenys	45.54	3.00e-114	405.00
IUUC-Opr-070621	Ochotona princeps	47.08	4.00e-107	381.00
IUUC-Ont-071377	Oreochromis niloticus	44.66	1.00e-112	399.00
IUUC-Oan-073498	Ornithorhynchus anatinus	34.83	4.00e-36	144.00
IUUC-Ocu-074182	Oryctolagus cuniculus	43.76	2.00e-110	392.00
IUUC-Obr-076480	Oryza brachyantha	71.07	0.00e+00	778.00
IUUC-Oin-079357	Oryza indica	67.11	0.00e+00	723.00
IUUC-Ola-086566	Oryzias latipes	44.02	2.00e-111	395.00
IUUC-Olu-087757	Ostreococcus lucimarinus	45.47	2.00e-118	419.00
IUUC-Oga-089010	Otolemur garnettii	43.81	2.00e-108	385.00
IUUC-Oar-089638	Ovis aries	45.35	8.00e-114	403.00
IUUC-Ptr-091141	Pan troglodytes	45.54	3.00e-114	405.00
IUUC-Pan-092662	Papio anubis	45.54	3.00e-114	405.00
IUUC-Psi-093777	Pelodiscus sinensis	44.83	4.00e-88	318.00
IUUC-Pno-095115	Phaeosphaeria nodorum	33.67	4.00e-64	238.00
IUUC-Pfo-096390	Poecilia formosa	45.35	3.00e-113	401.00
IUUC-Pab-098250	Pongo abelii	45.95	6.00e-110	390.00
IUUC-Pop-099854	Populus trichocarpa	75.72	0.00e+00	833.00
IUUC-Pca-100553	Procavia capensis	45.35	7.00e-112	397.00
IUUC-Ppe-101383	Prunus persica	69.81	0.00e+00	758.00
IUUC-Pva-102189	Pteropus vampyrus	45.35	7.00e-114	404.00
IUUC-Ptt-103984	Puccinia triticina	34.51	1.00e-79	290.00
IUUC-Pte-104385	Pyrenophora teres	31.87	3.00e-60	225.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	31.61	2.00e-59	223.00
IUUC-Rno-105581	Rattus norvegicus	45.16	2.00e-113	402.00
IUUC-Sce-106147	Saccharomyces cerevisiae	24.50	5.00e-25	108.00
IUUC-Sha-107071	Sarcophilus harrisii	43.68	2.00e-110	392.00
IUUC-Sit-109873	Setaria italica	70.02	0.00e+00	771.00
IUUC-Sly-111673	Solanum lycopersicum	74.52	0.00e+00	800.00
IUUC-Stu-112125	Solanum tuberosum	74.90	0.00e+00	802.00
IUUC-Sbi-114696	Sorghum bicolor	64.55	0.00e+00	676.00
IUUC-Ssc-116260	Sus scrofa	45.35	5.00e-114	404.00
IUUC-Tgu-116533	Taeniopygia guttata	45.74	2.00e-114	405.00
IUUC-Tru-117800	Takifugu rubripes	44.57	3.00e-114	405.00
IUUC-Tsy-118980	Tarsius syrichta	43.28	2.00e-99	355.00
IUUC-Tni-120334	Tetraodon nigroviridis	35.26	1.00e-75	276.00
IUUC-Tre-121920	Trichoderma reesei	32.07	2.00e-60	226.00
IUUC-Tvi-122294	Trichoderma virens	31.55	3.00e-51	196.00
IUUC-Tae-125713	Triticum aestivum	70.13	0.00e+00	777.00
IUUC-Tme-127026	Tuber melanosporum	34.41	4.00e-70	258.00
IUUC-Tbe-127582	Tupaia belangeri	45.13	2.00e-75	276.00
IUUC-Ttr-128313	Tursiops truncatus	45.17	7.00e-113	400.00
IUUC-Vda-129699	Verticillium dahliae	32.57	2.00e-57	216.00
IUUC-Vpa-130593	Vicugna pacos	46.87	3.00e-106	378.00
IUUC-Vvi-131668	Vitis vinifera	77.84	0.00e+00	851.00
IUUC-Xtr-132186	Xenopus tropicalis	46.91	8.00e-102	363.00
IUUC-Xma-133212	Xiphophorus maculatus	44.38	4.00e-113	401.00
IUUC-Yli-134607	Yarrowia lipolytica	53.03	2.00e-37	147.00
IUUC-Zma-135662	Zea mays	70.02	0.00e+00	773.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence