iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
Mentha
Post-translational Modifications (PTMs)
dbPAF	dbPTM	UniProt	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-21	72.5	286	319

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H ++v++++f   s+ l++s+++Dg+++v+Dlr+
   Q: 286  HDSEVFDVRFltkSTQLFASCGGDGSVRVFDLRS 319
           99*********976699**************986 PP

Organism

Saccharomyces cerevisiae

Protein Sequence
(Fasta)

MDPFHNGNKR SSISFGSSQR QPYNKNNYLS GTNGPSSAAQ DQGRGPSPFG MSGNTTNGGN 60
SKRNSGCDLS ATYYASRSPM YSPLDFSPPV FSPNHSQLQQ ARGYAANIPV VSNLMNPSMA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCCT TTCACAATGG CAATAAAAGG AGCTCAATAT CGTTTGGCTC ATCGCAGCGG 60
CAGCCATATA ACAAGAACAA TTACTTGAGT GGTACTAATG GGCCTTCCTC GGCGGCACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus

KEGG

sce:YPL247C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002310	Ailuropoda melanoleuca	40.30	3.00e-46	176.00
IUUC-Atr-002970	Amborella trichopoda	37.54	2.00e-48	184.00
IUUC-Apl-003746	Anas platyrhynchos	40.30	3.00e-46	176.00
IUUC-Aca-005293	Anolis carolinensis	36.20	5.00e-49	186.00
IUUC-Aly-006211	Arabidopsis lyrata	32.14	4.00e-44	169.00
IUUC-Ath-006884	Arabidopsis thaliana	31.80	4.00e-44	169.00
IUUC-Ago-007732	Ashbya gossypii	42.96	6.00e-109	385.00
IUUC-Acl-008299	Aspergillus clavatus	39.58	1.00e-51	195.00
IUUC-Afl-008470	Aspergillus flavus	34.92	3.00e-53	200.00
IUUC-Afu-008896	Aspergillus fumigatus	32.88	2.00e-47	181.00
IUUC-Ani-009375	Aspergillus nidulans	33.92	6.00e-52	196.00
IUUC-Ang-009687	Aspergillus niger	34.49	2.00e-53	201.00
IUUC-Aor-010198	Aspergillus oryzae	34.53	1.00e-52	199.00
IUUC-Ate-010363	Aspergillus terreus	43.64	2.00e-46	178.00
IUUC-Ame-010643	Astyanax mexicanus	34.46	4.00e-41	159.00
IUUC-Bgr-012055	Blumeria graminis	35.75	7.00e-53	199.00
IUUC-Bta-013199	Bos taurus	36.20	5.00e-49	186.00
IUUC-Bci-013840	Botrytis cinerea	35.21	1.00e-54	206.00
IUUC-Bdi-014374	Brachypodium distachyon	35.08	2.00e-40	157.00
IUUC-Bol-015620	Brassica oleracea	31.40	8.00e-42	162.00
IUUC-Bra-017045	Brassica rapa	31.64	5.00e-42	162.00
IUUC-Cel-018487	Caenorhabditis elegans	36.36	2.00e-51	194.00
IUUC-Cja-018736	Callithrix jacchus	36.20	5.00e-49	186.00
IUUC-Cfa-020446	Canis familiaris	36.20	5.00e-49	186.00
IUUC-Cpo-022424	Cavia porcellus	36.20	5.00e-49	186.00
IUUC-Cre-022609	Chlamydomonas reinhardtii	37.18	2.00e-43	167.00
IUUC-Csa-024013	Chlorocebus sabaeus	36.19	1.00e-46	179.00
IUUC-Cho-024507	Choloepus hoffmanni	40.61	2.00e-47	180.00
IUUC-Cin-025620	Ciona intestinalis	36.39	7.00e-50	188.00
IUUC-Csv-026111	Ciona savignyi	36.70	4.00e-50	189.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	43.20	4.00e-56	210.00
IUUC-Cne-026871	Cryptococcus neoformans	29.37	2.00e-37	147.00
IUUC-Cme-027345	Cyanidioschyzon merolae	30.09	3.00e-37	147.00
IUUC-Dre-027940	Danio rerio	37.96	3.00e-50	189.00
IUUC-Dno-029520	Dasypus novemcinctus	36.20	5.00e-49	186.00
IUUC-Dse-031207	Dothistroma septosporum	34.25	2.00e-49	188.00
IUUC-Dme-031639	Drosophila melanogaster	32.46	3.00e-54	203.00
IUUC-Ete-032605	Echinops telfairi	33.89	7.00e-40	155.00
IUUC-Eca-033668	Equus caballus	35.28	1.00e-42	164.00
IUUC-Fca-035942	Felis catus	36.20	5.00e-49	186.00
IUUC-Fal-037544	Ficedula albicollis	36.20	5.00e-49	186.00
IUUC-Fox-037852	Fusarium oxysporum	35.87	6.00e-56	209.00
IUUC-Fso-038173	Fusarium solani	41.21	9.00e-56	209.00
IUUC-Gmo-038850	Gadus morhua	37.42	9.00e-51	191.00
IUUC-Ggr-040072	Gaeumannomyces graminis	35.65	1.00e-54	205.00
IUUC-Gga-040439	Gallus gallus	36.20	5.00e-49	186.00
IUUC-Gac-041776	Gasterosteus aculeatus	37.42	3.00e-50	190.00
IUUC-Gma-043427	Glycine max	38.34	7.00e-47	178.00
IUUC-Ggo-044490	Gorilla gorilla	36.20	5.00e-49	186.00
IUUC-Hsa-046015	Homo sapiens	36.20	5.00e-49	186.00
IUUC-Hvu-047667	Hordeum vulgare	33.73	2.00e-41	161.00
IUUC-Itr-048428	Ictidomys tridecemlineatus	36.20	5.00e-49	186.00
IUUC-Kpa-049347	Komagataella pastoris	38.46	5.00e-65	239.00
IUUC-Lch-049754	Latimeria chalumnae	36.81	3.00e-50	189.00
IUUC-Lpe-051336	Leersia perrieri	35.52	3.00e-40	156.00
IUUC-Loc-052351	Lepisosteus oculatus	36.89	5.00e-48	182.00
IUUC-Lma-053005	Leptosphaeria maculans	39.05	2.00e-51	194.00
IUUC-Laf-054077	Loxodonta africana	36.20	5.00e-49	186.00
IUUC-Mcc-055728	Macaca mulatta	36.20	5.00e-49	186.00
IUUC-Meu-056685	Macropus eugenii	45.33	6.00e-31	125.00
IUUC-Mor-057075	Magnaporthe oryzae	34.78	6.00e-52	196.00
IUUC-Mpo-057336	Magnaporthe poae	36.07	7.00e-56	209.00
IUUC-Mtr-058793	Medicago truncatula	32.28	7.00e-46	175.00
IUUC-Mla-058866	Melampsora laricipopulina	38.13	3.00e-46	177.00
IUUC-Mga-059566	Meleagris gallopavo	40.30	3.00e-46	176.00
IUUC-Mvi-060379	Microbotryum violaceum	44.75	1.00e-35	142.00
IUUC-Mmr-060831	Microcebus murinus	36.20	5.00e-49	186.00
IUUC-Mdo-062612	Monodelphis domestica	36.20	5.00e-49	186.00
IUUC-Mmu-063399	Mus musculus	36.20	5.00e-49	186.00
IUUC-Mac-065344	Musa acuminata	30.34	5.00e-35	139.00
IUUC-Mpu-065951	Mustela putorius furo	36.20	5.00e-49	186.00
IUUC-Mlu-067858	Myotis lucifugus	35.78	5.00e-48	182.00
IUUC-Nfi-068302	Neosartorya fischeri	33.48	2.00e-48	185.00
IUUC-Ncr-068642	Neurospora crassa	35.27	3.00e-54	204.00
IUUC-Nle-070059	Nomascus leucogenys	36.20	5.00e-49	186.00
IUUC-Opr-070572	Ochotona princeps	36.42	3.00e-50	190.00
IUUC-Ont-071420	Oreochromis niloticus	31.00	1.00e-49	188.00
IUUC-Ocu-074105	Oryctolagus cuniculus	36.20	5.00e-49	186.00
IUUC-Oba-075409	Oryza barthii	36.22	6.00e-43	166.00
IUUC-Obr-076284	Oryza brachyantha	40.00	3.00e-38	150.00
IUUC-Ogl-076984	Oryza glaberrima	36.22	9.00e-43	165.00
IUUC-Ogu-078283	Oryza glumaepatula	35.91	1.00e-42	165.00
IUUC-Oin-080194	Oryza indica	41.88	1.00e-35	141.00
IUUC-Olo-080234	Oryza longistaminata	41.88	1.00e-35	141.00
IUUC-Ome-081174	Oryza meridionalis	35.91	8.00e-43	165.00
IUUC-Oni-082033	Oryza nivara	35.91	9.00e-43	165.00
IUUC-Opu-084034	Oryza punctata	36.53	2.00e-42	164.00
IUUC-Oru-084908	Oryza rufipogon	37.63	1.00e-40	159.00
IUUC-Osa-085678	Oryza sativa	35.91	9.00e-43	165.00
IUUC-Ola-086324	Oryzias latipes	38.27	1.00e-50	191.00
IUUC-Olu-087620	Ostreococcus lucimarinus	34.81	6.00e-41	159.00
IUUC-Oga-088446	Otolemur garnettii	36.20	5.00e-49	186.00
IUUC-Oar-090168	Ovis aries	36.20	5.00e-49	186.00
IUUC-Ptr-090691	Pan troglodytes	36.31	4.00e-49	186.00
IUUC-Pan-092772	Papio anubis	36.20	5.00e-49	186.00
IUUC-Psi-093304	Pelodiscus sinensis	40.08	1.00e-43	167.00
IUUC-Pma-094292	Petromyzon marinus	40.68	8.00e-47	178.00
IUUC-Pno-094967	Phaeosphaeria nodorum	39.53	3.00e-52	197.00
IUUC-Ppa-096005	Physcomitrella patens	31.71	4.00e-48	182.00
IUUC-Pfo-097157	Poecilia formosa	38.27	1.00e-50	191.00
IUUC-Pab-097898	Pongo abelii	36.19	3.00e-46	178.00
IUUC-Pop-098949	Populus trichocarpa	30.66	3.00e-46	176.00
IUUC-Pca-100404	Procavia capensis	36.42	3.00e-50	190.00
IUUC-Ppe-101603	Prunus persica	35.87	6.00e-46	175.00
IUUC-Pva-102938	Pteropus vampyrus	45.05	9.00e-37	145.00
IUUC-Pgr-103490	Puccinia graminis	40.82	2.00e-44	171.00
IUUC-Ptt-103946	Puccinia triticina	34.50	1.00e-45	175.00
IUUC-Pte-104094	Pyrenophora teres	38.76	7.00e-51	193.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	38.76	1.00e-50	192.00
IUUC-Rno-104961	Rattus norvegicus	36.20	5.00e-49	186.00
IUUC-Sha-107196	Sarcophilus harrisii	31.69	8.00e-40	155.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	34.43	3.00e-54	204.00
IUUC-Spo-108014	Schizosaccharomyces pombe	33.25	6.00e-48	182.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	34.76	1.00e-52	199.00
IUUC-Smo-109596	Selaginella moellendorffii	31.72	1.00e-44	171.00
IUUC-Sit-110625	Setaria italica	44.57	9.00e-37	145.00
IUUC-Sly-111410	Solanum lycopersicum	34.81	8.00e-44	168.00
IUUC-Stu-112854	Solanum tuberosum	34.49	2.00e-43	167.00
IUUC-Sar-113705	Sorex araneus	45.33	6.00e-31	125.00
IUUC-Sbi-114474	Sorghum bicolor	33.44	2.00e-40	157.00
IUUC-Sre-114968	Sporisorium reilianum	39.73	4.00e-44	170.00
IUUC-Ssc-116028	Sus scrofa	36.20	5.00e-49	186.00
IUUC-Tgu-117189	Taeniopygia guttata	36.20	5.00e-49	186.00
IUUC-Tru-117581	Takifugu rubripes	38.27	9.00e-51	191.00
IUUC-Tsy-119425	Tarsius syrichta	37.80	1.00e-27	114.00
IUUC-Tni-120649	Tetraodon nigroviridis	37.96	6.00e-49	185.00
IUUC-Tca-121058	Theobroma cacao	32.69	1.00e-45	174.00
IUUC-Tre-121987	Trichoderma reesei	36.53	2.00e-55	207.00
IUUC-Tvi-122586	Trichoderma virens	36.90	4.00e-55	206.00
IUUC-Tae-125627	Triticum aestivum	33.94	2.00e-39	154.00
IUUC-Tur-126531	Triticum urartu	34.25	1.00e-40	159.00
IUUC-Tme-126973	Tuber melanosporum	38.62	2.00e-47	181.00
IUUC-Tbe-127919	Tupaia belangeri	36.42	3.00e-50	190.00
IUUC-Ttr-129135	Tursiops truncatus	47.65	2.00e-38	150.00
IUUC-Uma-129362	Ustilago maydis	45.50	6.00e-44	170.00
IUUC-Vda-130025	Verticillium dahliae	41.23	5.00e-57	213.00
IUUC-Vvi-131717	Vitis vinifera	32.20	2.00e-49	187.00
IUUC-Xtr-132175	Xenopus tropicalis	36.50	7.00e-50	188.00
IUUC-Xma-134129	Xiphophorus maculatus	38.27	1.00e-50	191.00
IUUC-Yli-134419	Yarrowia lipolytica	42.36	2.00e-59	221.00
IUUC-Zma-135092	Zea mays	33.94	1.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence