iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081696

Ensembl Protein ID

OMERI04G03410.1

UniProt Accession

A0A0E0DB39; A0A0E0DB39_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI04G03410	OMERI04G03410.1	OMERI04G03410.1
OMERI04G03410	OMERI04G03410.2	OMERI04G03410.2
OMERI04G03410	OMERI04G03410.3	OMERI04G03410.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-46	153.1	474	513
UBD/Beta-Prp	6.00e-61	207.2	200	390

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  +v+++af ++  +l+sGs D  +++W++++g+ lk+
   Q: 474  GHRQPVYSVAFsPGgEYLASGSLDQCLHIWSVKEGRILKT 513
           8***********889********************99875 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee................tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           v +l+gh+++v ++++sp g+ l+sGs d+t+r+w ++ g c +                   +++++ v+++ ++++g ll++Gs+D++ r+W
   Q: 200  VTVLEGHSSEVFACAWSPAGSLLASGSGDSTARIWTIPDGPCGSItqssppgvhvlkhfkgRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 293
           67899*************************************99899*************988888899************************* PP
   S: 165  dlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllk 258
           ++  g+l +tl + h++++ sl+++++g +l+sgs d+t ++wd +t ec ++++ h++++++v+   n++ ++++s D+ i++  +  + ++k
   Q: 294  NS-DGELKQTLFK-HKGPIFSLKWNKKGDFLLSGSVDKTAIVWDTKTWECKQQFEFHSAPTLDVDWR-NNNSFATCSTDNMIYVCKIGDQRPVK 384
           88.9*******88.***************************************************88.9999************9999999*** PP
   S: 259  tlqlhn 264
           ++++h+
   Q: 385  SFSGHQ 390
           **9997 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MGAITSAELN FLIFRYLQES GFIHAAFTLG YEAGIHKGGI DGNLVPPGAL ITIVQKGLQY 60
IELEANTDEN DEDLAKDFAL LEPLEIITKN VEELQQIVKK RKREKTQSDR DKDKGKEKER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACACCATC CATCCCTTCG CCGGTTTCGT CCCCTTGGCC ACTCTCCCCT CTCCCCCCTC 60
CCCTCTCCCC TCTCCTCCGG AGCCTTCCCG TCTCGGCGGC GGCCACGCGT TCGTCGCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016575--P:histone deacetylation
GO:0009409--P:response to cold

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	92.96	3.00e-79	285.00
IUUC-Aml-001717	Ailuropoda melanoleuca	61.26	1.00e-127	449.00
IUUC-Atr-002514	Amborella trichopoda	78.82	4.00e-179	620.00
IUUC-Apl-003232	Anas platyrhynchos	49.10	5.00e-154	536.00
IUUC-Aca-005035	Anolis carolinensis	48.93	2.00e-154	538.00
IUUC-Aly-005622	Arabidopsis lyrata	70.98	9.00e-152	529.00
IUUC-Ath-007137	Arabidopsis thaliana	67.65	7.00e-152	530.00
IUUC-Ame-011601	Astyanax mexicanus	61.75	1.00e-129	455.00
IUUC-Bta-012418	Bos taurus	60.71	9.00e-135	472.00
IUUC-Bdi-014315	Brachypodium distachyon	88.51	0.00e+00	931.00
IUUC-Bol-016277	Brassica oleracea	67.86	2.00e-154	538.00
IUUC-Bra-016944	Brassica rapa	64.90	6.00e-155	540.00
IUUC-Cja-019281	Callithrix jacchus	49.55	2.00e-156	545.00
IUUC-Cfa-020029	Canis familiaris	61.26	1.00e-127	449.00
IUUC-Cpo-022080	Cavia porcellus	48.03	6.00e-140	489.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	58.47	1.00e-122	432.00
IUUC-Csa-023943	Chlorocebus sabaeus	49.01	1.00e-155	541.00
IUUC-Cin-025704	Ciona intestinalis	47.07	5.00e-150	523.00
IUUC-Csv-026257	Ciona savignyi	48.65	2.00e-148	518.00
IUUC-Cne-026946	Cryptococcus neoformans	31.43	1.00e-23	104.00
IUUC-Cme-027258	Cyanidioschyzon merolae	37.44	6.00e-110	390.00
IUUC-Dre-027586	Danio rerio	48.29	8.00e-152	529.00
IUUC-Dno-029196	Dasypus novemcinctus	61.26	6.00e-128	450.00
IUUC-Dor-030732	Dipodomys ordii	61.45	6.00e-124	436.00
IUUC-Dme-031939	Drosophila melanogaster	56.68	4.00e-120	424.00
IUUC-Ete-032822	Echinops telfairi	43.60	1.00e-122	432.00
IUUC-Eca-033897	Equus caballus	49.55	1.00e-155	541.00
IUUC-Eeu-034952	Erinaceus europaeus	54.44	2.00e-106	379.00
IUUC-Fca-035734	Felis catus	61.26	8.00e-128	449.00
IUUC-Fal-037185	Ficedula albicollis	61.26	8.00e-128	449.00
IUUC-Gmo-038870	Gadus morhua	49.55	1.00e-153	535.00
IUUC-Gga-041161	Gallus gallus	61.26	7.00e-128	449.00
IUUC-Gac-041851	Gasterosteus aculeatus	49.55	5.00e-154	536.00
IUUC-Gma-043369	Glycine max	73.99	3.00e-177	614.00
IUUC-Ggo-045373	Gorilla gorilla	48.93	2.00e-156	544.00
IUUC-Hsa-045841	Homo sapiens	49.19	1.00e-156	545.00
IUUC-Itr-047958	Ictidomys tridecemlineatus	61.26	9.00e-127	445.00
IUUC-Kpa-049338	Komagataella pastoris	28.52	8.00e-29	120.00
IUUC-Lch-050672	Latimeria chalumnae	49.73	1.00e-146	512.00
IUUC-Lpe-051084	Leersia perrieri	95.86	0.00e+00	966.00
IUUC-Loc-052030	Lepisosteus oculatus	50.27	2.00e-156	545.00
IUUC-Laf-054280	Loxodonta africana	49.55	1.00e-154	538.00
IUUC-Mcc-055233	Macaca mulatta	49.00	4.00e-152	530.00
IUUC-Meu-056563	Macropus eugenii	66.67	1.00e-89	322.00
IUUC-Mtr-058624	Medicago truncatula	61.64	0.00e+00	711.00
IUUC-Mga-059660	Meleagris gallopavo	61.26	7.00e-128	449.00
IUUC-Mvi-060557	Microbotryum violaceum	36.27	1.00e-65	244.00
IUUC-Mmr-061286	Microcebus murinus	49.19	1.00e-155	541.00
IUUC-Mdo-062078	Monodelphis domestica	50.09	4.00e-147	513.00
IUUC-Mmu-063603	Mus musculus	50.45	6.00e-148	516.00
IUUC-Mac-065508	Musa acuminata	70.91	1.00e-172	598.00
IUUC-Mpu-066741	Mustela putorius furo	61.26	1.00e-127	449.00
IUUC-Mlu-068152	Myotis lucifugus	61.26	8.00e-128	449.00
IUUC-Nle-069151	Nomascus leucogenys	49.01	4.00e-155	540.00
IUUC-Opr-070277	Ochotona princeps	42.81	5.00e-113	400.00
IUUC-Ont-071569	Oreochromis niloticus	50.27	4.00e-158	550.00
IUUC-Oan-073562	Ornithorhynchus anatinus	49.29	1.00e-155	541.00
IUUC-Ocu-074280	Oryctolagus cuniculus	50.45	6.00e-149	520.00
IUUC-Oba-075618	Oryza barthii	95.14	0.00e+00	987.00
IUUC-Obr-076718	Oryza brachyantha	94.05	0.00e+00	948.00
IUUC-Ogl-077302	Oryza glaberrima	98.38	0.00e+00	1038.00
IUUC-Ogu-078718	Oryza glumaepatula	98.56	0.00e+00	1039.00
IUUC-Oin-079515	Oryza indica	92.29	0.00e+00	748.00
IUUC-Olo-080427	Oryza longistaminata	87.85	0.00e+00	910.00
IUUC-Oni-082137	Oryza nivara	98.56	0.00e+00	1039.00
IUUC-Opu-083505	Oryza punctata	93.69	0.00e+00	979.00
IUUC-Oru-085276	Oryza rufipogon	98.02	0.00e+00	1036.00
IUUC-Osa-085791	Oryza sativa	98.56	0.00e+00	1039.00
IUUC-Ola-087365	Oryzias latipes	60.71	9.00e-135	472.00
IUUC-Olu-087589	Ostreococcus lucimarinus	64.63	3.00e-146	511.00
IUUC-Oga-088365	Otolemur garnettii	44.80	2.00e-135	474.00
IUUC-Oar-089214	Ovis aries	60.99	1.00e-135	475.00
IUUC-Ptr-090793	Pan troglodytes	48.74	9.00e-151	526.00
IUUC-Pan-091909	Papio anubis	48.92	3.00e-156	544.00
IUUC-Psi-093941	Pelodiscus sinensis	50.00	9.00e-147	512.00
IUUC-Pma-094105	Petromyzon marinus	60.90	2.00e-39	155.00
IUUC-Ppa-095868	Physcomitrella patens	74.87	2.00e-165	575.00
IUUC-Pfo-097214	Poecilia formosa	49.55	6.00e-147	513.00
IUUC-Pab-098317	Pongo abelii	49.27	2.00e-152	531.00
IUUC-Pop-098989	Populus trichocarpa	76.19	6.00e-166	575.00
IUUC-Pca-100256	Procavia capensis	49.18	1.00e-143	502.00
IUUC-Ppe-101572	Prunus persica	66.01	0.00e+00	655.00
IUUC-Pva-102616	Pteropus vampyrus	49.73	5.00e-145	506.00
IUUC-Rno-105411	Rattus norvegicus	50.27	2.00e-147	514.00
IUUC-Sce-106132	Saccharomyces cerevisiae	24.24	6.00e-36	144.00
IUUC-Sha-107326	Sarcophilus harrisii	49.73	2.00e-156	544.00
IUUC-Sja-107844	Schizosaccharomyces japonicus	25.82	2.00e-28	119.00
IUUC-Smo-109301	Selaginella moellendorffii	75.97	1.00e-167	582.00
IUUC-Sit-110710	Setaria italica	88.69	0.00e+00	910.00
IUUC-Sly-111336	Solanum lycopersicum	76.09	7.00e-171	592.00
IUUC-Stu-112786	Solanum tuberosum	57.74	0.00e+00	643.00
IUUC-Sar-112971	Sorex araneus	52.91	2.00e-111	395.00
IUUC-Sbi-114420	Sorghum bicolor	86.81	0.00e+00	929.00
IUUC-Sre-115175	Sporisorium reilianum	41.11	3.00e-53	202.00
IUUC-Ssc-115646	Sus scrofa	49.55	3.00e-155	541.00
IUUC-Tgu-116898	Taeniopygia guttata	49.28	1.00e-154	538.00
IUUC-Tru-118254	Takifugu rubripes	50.09	9.00e-157	545.00
IUUC-Tsy-119424	Tarsius syrichta	41.06	6.00e-105	373.00
IUUC-Tni-120861	Tetraodon nigroviridis	50.36	3.00e-155	540.00
IUUC-Tca-121739	Theobroma cacao	69.23	2.00e-168	585.00
IUUC-Tae-125368	Triticum aestivum	88.39	0.00e+00	929.00
IUUC-Tur-126856	Triticum urartu	85.32	4.00e-172	597.00
IUUC-Tme-127126	Tuber melanosporum	32.68	2.00e-45	176.00
IUUC-Tbe-127767	Tupaia belangeri	63.05	8.00e-114	402.00
IUUC-Ttr-128826	Tursiops truncatus	49.32	4.00e-139	487.00
IUUC-Uma-129469	Ustilago maydis	41.50	1.00e-53	204.00
IUUC-Vpa-130768	Vicugna pacos	61.11	7.00e-125	439.00
IUUC-Vvi-130909	Vitis vinifera	53.45	7.00e-96	343.00
IUUC-Xtr-132842	Xenopus tropicalis	47.47	9.00e-140	489.00
IUUC-Xma-133591	Xiphophorus maculatus	49.91	2.00e-147	514.00
IUUC-Yli-134648	Yarrowia lipolytica	28.92	7.00e-40	157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence