iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007629

UUCD1 version

UUC-ArT-00604

Ensembl Protein ID

AT4G35140.2

UniProt Accession

Q8L862; Q8L862_ARATH

Genbank Protein ID

AAM53280.1; AAN15347.1; AEE86472.1

Protein Name

Putative uncharacterized protein At4g35140; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

AY120722; BT000028; CP002687

Gene Name

At4g35140; T12J5.10; T12J5_10

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G35140	AT4G35140.2	AT4G35140.2
AT4G35140	AT4G35140.1	AT4G35140.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-20	71.5	58	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ v+ ++f  + + l+sGsdD  + +WD+
   Q: 58   HKGCVNTVSFnAEgDVLISGSDDRRVVLWDW 88
           99********944599**************7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSEKARRGRS NFNGLHHPVV DFWRREVGGI SSRNFSNRFS ASENLVLRLE IYKKLEKHKG 60
CVNTVSFNAE GDVLISGSDD RRVVLWDWQL GNVKLSFHSG HANNVFQAKF MPFSDDRTIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTACGCATT ACAAATACAC ACTACGCTTC TTCGTCTTCT CTCTGTGGGA CTTCTGAAGT 60
AGTAATTTCA CGGCGAGATA CAGAGCAATT AGAGAATCTT CTCTCTGGTC TATTACCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000666	Aegilops tauschii	57.68	7.00e-127	446.00
IUUC-Aml-001810	Ailuropoda melanoleuca	40.71	5.00e-77	281.00
IUUC-Atr-002714	Amborella trichopoda	59.75	3.00e-131	461.00
IUUC-Apl-003872	Anas platyrhynchos	32.55	8.00e-35	140.00
IUUC-Aca-004853	Anolis carolinensis	41.65	1.00e-71	263.00
IUUC-Aly-005505	Arabidopsis lyrata	93.79	0.00e+00	762.00
IUUC-Ame-011615	Astyanax mexicanus	41.63	6.00e-82	297.00
IUUC-Bta-013549	Bos taurus	41.22	1.00e-77	283.00
IUUC-Bdi-014538	Brachypodium distachyon	59.84	7.00e-131	459.00
IUUC-Bol-015797	Brassica oleracea	77.83	0.00e+00	703.00
IUUC-Bra-017142	Brassica rapa	77.60	0.00e+00	702.00
IUUC-Cja-018802	Callithrix jacchus	40.97	2.00e-77	283.00
IUUC-Cfa-020535	Canis familiaris	40.71	2.00e-77	282.00
IUUC-Cpo-022216	Cavia porcellus	40.71	4.00e-77	281.00
IUUC-Csa-023095	Chlorocebus sabaeus	40.97	3.00e-77	282.00
IUUC-Dre-027731	Danio rerio	40.99	8.00e-81	293.00
IUUC-Dno-029192	Dasypus novemcinctus	40.97	2.00e-77	283.00
IUUC-Ete-032932	Echinops telfairi	36.06	2.00e-63	236.00
IUUC-Eca-034100	Equus caballus	40.97	1.00e-77	283.00
IUUC-Fca-036138	Felis catus	40.97	1.00e-77	283.00
IUUC-Gmo-038895	Gadus morhua	39.81	4.00e-80	290.00
IUUC-Gga-040447	Gallus gallus	41.60	3.00e-72	265.00
IUUC-Gac-041796	Gasterosteus aculeatus	42.27	8.00e-82	296.00
IUUC-Gma-044062	Glycine max	68.14	2.00e-155	541.00
IUUC-Ggo-045613	Gorilla gorilla	40.97	1.00e-77	283.00
IUUC-Hsa-046377	Homo sapiens	40.97	2.00e-77	283.00
IUUC-Hvu-047075	Hordeum vulgare	57.29	4.00e-129	453.00
IUUC-Lch-050050	Latimeria chalumnae	31.97	2.00e-45	176.00
IUUC-Lpe-051327	Leersia perrieri	57.84	9.00e-131	459.00
IUUC-Laf-053407	Loxodonta africana	41.22	5.00e-78	284.00
IUUC-Mcc-055604	Macaca mulatta	40.97	3.00e-77	282.00
IUUC-Meu-056043	Macropus eugenii	40.20	2.00e-71	262.00
IUUC-Mtr-058683	Medicago truncatula	64.45	9.00e-163	565.00
IUUC-Mga-059697	Meleagris gallopavo	38.89	1.00e-34	139.00
IUUC-Mmr-061338	Microcebus murinus	41.22	9.00e-78	284.00
IUUC-Mdo-062689	Monodelphis domestica	41.22	1.00e-70	260.00
IUUC-Mmu-063993	Mus musculus	40.74	3.00e-78	285.00
IUUC-Mac-065466	Musa acuminata	60.00	2.00e-145	508.00
IUUC-Mpu-066622	Mustela putorius furo	40.46	6.00e-77	281.00
IUUC-Mlu-067235	Myotis lucifugus	40.97	2.00e-77	282.00
IUUC-Nle-069048	Nomascus leucogenys	40.97	1.00e-77	283.00
IUUC-Ont-072060	Oreochromis niloticus	41.13	1.00e-81	296.00
IUUC-Ocu-074684	Oryctolagus cuniculus	40.97	1.00e-77	283.00
IUUC-Oba-075028	Oryza barthii	57.04	5.00e-134	470.00
IUUC-Obr-076114	Oryza brachyantha	59.69	3.00e-134	471.00
IUUC-Ogl-077918	Oryza glaberrima	57.04	8.00e-134	469.00
IUUC-Ogu-078824	Oryza glumaepatula	57.04	1.00e-133	469.00
IUUC-Oin-080061	Oryza indica	57.04	2.00e-133	468.00
IUUC-Olo-081064	Oryza longistaminata	59.28	1.00e-131	462.00
IUUC-Ome-081405	Oryza meridionalis	58.55	4.00e-135	473.00
IUUC-Oni-082481	Oryza nivara	55.48	7.00e-131	459.00
IUUC-Opu-083681	Oryza punctata	58.39	5.00e-133	467.00
IUUC-Oru-084398	Oryza rufipogon	57.04	1.00e-133	469.00
IUUC-Osa-086227	Oryza sativa	57.04	3.00e-133	468.00
IUUC-Oga-088849	Otolemur garnettii	40.97	1.00e-77	283.00
IUUC-Oar-089474	Ovis aries	39.19	2.00e-67	249.00
IUUC-Ptr-091235	Pan troglodytes	40.97	1.00e-77	283.00
IUUC-Pan-092895	Papio anubis	40.97	3.00e-77	282.00
IUUC-Psi-093973	Pelodiscus sinensis	40.90	5.00e-77	281.00
IUUC-Pfo-097275	Poecilia formosa	41.13	2.00e-81	295.00
IUUC-Pab-098299	Pongo abelii	40.97	2.00e-77	283.00
IUUC-Pop-099784	Populus trichocarpa	65.14	7.00e-160	556.00
IUUC-Pca-100729	Procavia capensis	37.50	2.00e-64	239.00
IUUC-Ppe-101712	Prunus persica	66.11	3.00e-166	577.00
IUUC-Pva-103030	Pteropus vampyrus	40.97	1.00e-77	283.00
IUUC-Rno-105416	Rattus norvegicus	41.22	1.00e-77	283.00
IUUC-Sha-106545	Sarcophilus harrisii	41.22	2.00e-70	259.00
IUUC-Sja-107779	Schizosaccharomyces japonicus	31.91	9.00e-29	121.00
IUUC-Sit-110744	Setaria italica	56.69	6.00e-130	456.00
IUUC-Sly-111727	Solanum lycopersicum	64.37	9.00e-161	559.00
IUUC-Stu-112421	Solanum tuberosum	64.37	8.00e-160	556.00
IUUC-Sbi-114821	Sorghum bicolor	57.25	1.00e-133	469.00
IUUC-Ssc-115612	Sus scrofa	41.22	9.00e-78	283.00
IUUC-Tru-117708	Takifugu rubripes	40.78	7.00e-81	294.00
IUUC-Tsy-119579	Tarsius syrichta	36.13	3.00e-61	228.00
IUUC-Tni-120739	Tetraodon nigroviridis	40.39	1.00e-78	286.00
IUUC-Tca-121555	Theobroma cacao	66.59	2.00e-169	588.00
IUUC-Tae-124421	Triticum aestivum	57.83	8.00e-132	462.00
IUUC-Tur-126617	Triticum urartu	58.87	8.00e-130	456.00
IUUC-Tbe-128115	Tupaia belangeri	39.04	1.00e-67	249.00
IUUC-Vvi-131540	Vitis vinifera	66.03	7.00e-168	582.00
IUUC-Xtr-131860	Xenopus tropicalis	35.18	2.00e-57	216.00
IUUC-Xma-133371	Xiphophorus maculatus	42.27	7.00e-81	294.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence