iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074719

Ensembl Protein ID

ENSOCUP00000023302.2

UniProt Accession

G1U1R4; G1U1R4_RABIT

Genbank Protein ID

ENSOCUP00000023302

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02002297

Gene Name

WDR78

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000021747.2	ENSOCUT00000031843.2	ENSOCUP00000023302.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-10	39.6	499	531

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf....sdtllvsGsdDgtikvWDlrtg 33
           ++vt+++f    + +ll++G ++gti ++++ ++
   Q: 499  CGVTAVDFsigaP-NLLAVGLHNGTILIYNVQSN 531
           679******9877.9***************9776 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MYFSPTNSRK QPNLGMNNGS QTRKSISFIG AARGMPTKGF ITTNQSRMAL SKTTLTQSDV 60
KTLEKMNTPS TKTIQVFDIN GVDVTPRPLY HPDPHVSATK PSKLLTSQEG SLGSDFIASY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTACTTCT CTCCGACAAA CAGCCGTAAG CAGCCGAACC TCGGGATGTA AGTTGCGGCG 60
CTGACACCGA AGCCCACCCC CGCGGGGCCC GGAGCGACCC GCCCCTGGAT TGGGGAAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

KEGG

ocu:100351421

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002359	Ailuropoda melanoleuca	78.99	0.00e+00	1213.00
IUUC-Apl-004037	Anas platyrhynchos	53.12	0.00e+00	806.00
IUUC-Aca-004686	Anolis carolinensis	57.18	0.00e+00	829.00
IUUC-Ame-010641	Astyanax mexicanus	47.96	1.00e-173	603.00
IUUC-Bta-012779	Bos taurus	79.60	0.00e+00	1240.00
IUUC-Cja-019217	Callithrix jacchus	80.37	0.00e+00	1264.00
IUUC-Cfa-020613	Canis familiaris	80.27	0.00e+00	1243.00
IUUC-Cpo-022374	Cavia porcellus	76.39	0.00e+00	1201.00
IUUC-Cre-022690	Chlamydomonas reinhardtii	38.60	6.00e-67	249.00
IUUC-Csa-023471	Chlorocebus sabaeus	79.68	0.00e+00	1267.00
IUUC-Cho-024485	Choloepus hoffmanni	71.63	0.00e+00	1036.00
IUUC-Cin-025295	Ciona intestinalis	44.78	2.00e-170	592.00
IUUC-Csv-025888	Ciona savignyi	44.31	2.00e-173	602.00
IUUC-Dre-027657	Danio rerio	43.86	0.00e+00	642.00
IUUC-Dno-029422	Dasypus novemcinctus	74.12	0.00e+00	1135.00
IUUC-Ete-032340	Echinops telfairi	60.18	2.00e-114	406.00
IUUC-Eca-033418	Equus caballus	82.59	0.00e+00	1209.00
IUUC-Eeu-035088	Erinaceus europaeus	65.66	5.00e-154	538.00
IUUC-Fca-035471	Felis catus	80.20	0.00e+00	1196.00
IUUC-Fal-036908	Ficedula albicollis	48.04	1.00e-164	573.00
IUUC-Gmo-038672	Gadus morhua	32.93	3.00e-84	306.00
IUUC-Gga-040422	Gallus gallus	51.78	0.00e+00	748.00
IUUC-Gac-042448	Gasterosteus aculeatus	41.30	4.00e-150	525.00
IUUC-Ggo-045567	Gorilla gorilla	81.66	0.00e+00	1186.00
IUUC-Hsa-046857	Homo sapiens	81.06	0.00e+00	1281.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	84.82	0.00e+00	815.00
IUUC-Lch-050496	Latimeria chalumnae	53.84	0.00e+00	804.00
IUUC-Loc-052759	Lepisosteus oculatus	54.63	0.00e+00	780.00
IUUC-Laf-053515	Loxodonta africana	77.99	0.00e+00	1219.00
IUUC-Mcc-054741	Macaca mulatta	80.25	0.00e+00	1283.00
IUUC-Meu-056698	Macropus eugenii	78.29	4.00e-144	504.00
IUUC-Mga-059689	Meleagris gallopavo	53.18	0.00e+00	731.00
IUUC-Mmr-061641	Microcebus murinus	71.10	0.00e+00	855.00
IUUC-Mdo-061968	Monodelphis domestica	65.45	0.00e+00	1004.00
IUUC-Mmu-063908	Mus musculus	73.28	0.00e+00	1105.00
IUUC-Mpu-065957	Mustela putorius furo	78.77	0.00e+00	1185.00
IUUC-Mlu-067454	Myotis lucifugus	75.28	0.00e+00	1184.00
IUUC-Nle-069312	Nomascus leucogenys	80.74	0.00e+00	1300.00
IUUC-Opr-070363	Ochotona princeps	74.66	0.00e+00	1174.00
IUUC-Ont-072322	Oreochromis niloticus	40.30	1.00e-149	523.00
IUUC-Oan-073666	Ornithorhynchus anatinus	62.13	0.00e+00	883.00
IUUC-Ola-087351	Oryzias latipes	45.13	7.00e-81	293.00
IUUC-Olu-087835	Ostreococcus lucimarinus	30.45	9.00e-42	164.00
IUUC-Oga-088476	Otolemur garnettii	74.10	0.00e+00	1038.00
IUUC-Oar-089261	Ovis aries	80.74	0.00e+00	1226.00
IUUC-Pan-091774	Papio anubis	80.17	0.00e+00	1280.00
IUUC-Psi-093526	Pelodiscus sinensis	58.34	0.00e+00	899.00
IUUC-Pma-094755	Petromyzon marinus	48.91	3.00e-73	267.00
IUUC-Ppa-095355	Physcomitrella patens	43.95	2.00e-37	149.00
IUUC-Pfo-096510	Poecilia formosa	38.67	2.00e-136	479.00
IUUC-Pab-098218	Pongo abelii	81.36	0.00e+00	1265.00
IUUC-Pva-102551	Pteropus vampyrus	85.16	0.00e+00	672.00
IUUC-Rno-105674	Rattus norvegicus	73.95	0.00e+00	1178.00
IUUC-Sha-107552	Sarcophilus harrisii	66.06	0.00e+00	1006.00
IUUC-Smo-109353	Selaginella moellendorffii	40.52	7.00e-65	240.00
IUUC-Sar-113136	Sorex araneus	69.39	0.00e+00	949.00
IUUC-Ssc-116203	Sus scrofa	83.26	0.00e+00	1051.00
IUUC-Tgu-117141	Taeniopygia guttata	48.28	3.00e-171	595.00
IUUC-Tni-119670	Tetraodon nigroviridis	36.38	1.00e-105	376.00
IUUC-Tbe-127913	Tupaia belangeri	77.06	0.00e+00	931.00
IUUC-Ttr-128515	Tursiops truncatus	74.69	0.00e+00	1117.00
IUUC-Vpa-130560	Vicugna pacos	79.58	0.00e+00	648.00
IUUC-Xtr-131755	Xenopus tropicalis	55.18	0.00e+00	778.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence