iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021517

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02012464

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000026530.1	ENSCPOT00000020503.1	ENSCPOP00000020083.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-24	84.3	239	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gHt +v+ ++f ++  ll++G++D +i++WD+++g 
   Q: 239  GHTLGVSQVCFlPEsYLLLTGGNDAKIMLWDVSCGI 274
           8999********88899**************99886 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MAVKWTGGHS SPILCLNASK DGLVASGAGG GDLTVWSEDG TPLGHMRFPG TDDVTSVVFS 60
HSCPTNIYAA HGETISILDV RALKESLDHF HVNEEEINCL SLNEAENLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGTCA AGTGGACTGG TGGACATTCT TCTCCCATCC TTTGCCTGAA TGCAAGTAAA 60
GATGGACTAG TGGCTTCTGG AGCAGGGGGT GGAGACCTTA CAGTGTGGAG TGAGGATGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	26.58	1.00e-12	67.40
IUUC-Aml-001203	Ailuropoda melanoleuca	84.40	3.00e-172	597.00
IUUC-Atr-002680	Amborella trichopoda	24.63	1.00e-20	94.00
IUUC-Apl-003656	Anas platyrhynchos	58.38	2.00e-105	375.00
IUUC-Aca-004987	Anolis carolinensis	61.17	5.00e-122	430.00
IUUC-Aly-006254	Arabidopsis lyrata	30.43	8.00e-27	114.00
IUUC-Ath-006632	Arabidopsis thaliana	28.76	2.00e-24	106.00
IUUC-Ame-011032	Astyanax mexicanus	45.97	6.00e-92	330.00
IUUC-Bta-012588	Bos taurus	77.99	1.00e-154	538.00
IUUC-Bdi-014532	Brachypodium distachyon	29.52	1.00e-23	103.00
IUUC-Bol-015542	Brassica oleracea	26.58	5.00e-18	86.30
IUUC-Bra-017046	Brassica rapa	29.00	7.00e-25	109.00
IUUC-Cja-019365	Callithrix jacchus	85.24	0.00e+00	635.00
IUUC-Cfa-021090	Canis familiaris	83.84	4.00e-172	597.00
IUUC-Csa-023041	Chlorocebus sabaeus	83.01	3.00e-173	600.00
IUUC-Cho-024801	Choloepus hoffmanni	81.06	2.00e-174	604.00
IUUC-Dre-028437	Danio rerio	46.26	1.00e-85	309.00
IUUC-Dno-029267	Dasypus novemcinctus	82.45	6.00e-177	612.00
IUUC-Ete-032726	Echinops telfairi	66.57	4.00e-138	484.00
IUUC-Eca-033621	Equus caballus	82.63	3.00e-163	567.00
IUUC-Eeu-034461	Erinaceus europaeus	72.98	6.00e-153	533.00
IUUC-Fca-036410	Felis catus	84.12	1.00e-171	595.00
IUUC-Fal-036676	Ficedula albicollis	63.69	5.00e-128	450.00
IUUC-Gmo-039597	Gadus morhua	37.41	1.00e-17	84.30
IUUC-Gga-040760	Gallus gallus	61.00	1.00e-68	251.00
IUUC-Gac-041905	Gasterosteus aculeatus	46.92	5.00e-89	321.00
IUUC-Gma-043066	Glycine max	25.74	1.00e-15	77.40
IUUC-Ggo-044881	Gorilla gorilla	83.01	1.00e-172	598.00
IUUC-Hsa-046836	Homo sapiens	82.73	8.00e-172	595.00
IUUC-Hvu-047651	Hordeum vulgare	33.33	1.00e-21	97.10
IUUC-Itr-048206	Ictidomys tridecemlineatus	85.47	4.00e-175	607.00
IUUC-Lch-050406	Latimeria chalumnae	51.74	2.00e-88	319.00
IUUC-Loc-052878	Lepisosteus oculatus	51.52	6.00e-96	343.00
IUUC-Laf-053547	Loxodonta africana	80.73	6.00e-171	593.00
IUUC-Mcc-054646	Macaca mulatta	83.01	5.00e-173	600.00
IUUC-Meu-056381	Macropus eugenii	71.87	2.00e-153	534.00
IUUC-Mtr-058656	Medicago truncatula	34.38	1.00e-17	84.00
IUUC-Mmr-061601	Microcebus murinus	83.24	7.00e-178	616.00
IUUC-Mdo-062305	Monodelphis domestica	73.26	3.00e-157	547.00
IUUC-Mmu-063213	Mus musculus	79.67	2.00e-161	561.00
IUUC-Mac-064940	Musa acuminata	24.07	3.00e-26	112.00
IUUC-Mpu-066629	Mustela putorius furo	82.45	3.00e-170	590.00
IUUC-Nle-069860	Nomascus leucogenys	83.29	1.00e-173	602.00
IUUC-Opr-071180	Ochotona princeps	78.65	1.00e-142	499.00
IUUC-Ont-071912	Oreochromis niloticus	47.03	1.00e-94	340.00
IUUC-Ocu-074874	Oryctolagus cuniculus	81.89	1.00e-177	615.00
IUUC-Oba-075815	Oryza barthii	25.54	7.00e-14	71.20
IUUC-Obr-076835	Oryza brachyantha	33.33	4.00e-20	92.00
IUUC-Ogu-077977	Oryza glumaepatula	29.38	2.00e-13	70.50
IUUC-Oin-079206	Oryza indica	26.29	3.00e-22	99.00
IUUC-Olo-080621	Oryza longistaminata	29.11	7.00e-12	64.70
IUUC-Ome-081261	Oryza meridionalis	29.66	4.00e-12	65.50
IUUC-Opu-083256	Oryza punctata	25.00	3.00e-13	69.30
IUUC-Osa-085892	Oryza sativa	26.29	3.00e-22	99.00
IUUC-Ola-086701	Oryzias latipes	47.00	9.00e-89	320.00
IUUC-Olu-087593	Ostreococcus lucimarinus	23.28	3.00e-08	52.80
IUUC-Oga-088152	Otolemur garnettii	81.84	3.00e-176	610.00
IUUC-Oar-089681	Ovis aries	81.34	6.00e-163	566.00
IUUC-Ptr-091142	Pan troglodytes	83.01	2.00e-172	598.00
IUUC-Pan-092435	Papio anubis	83.01	3.00e-166	577.00
IUUC-Psi-093255	Pelodiscus sinensis	66.11	2.00e-141	495.00
IUUC-Ppa-095829	Physcomitrella patens	28.92	2.00e-27	116.00
IUUC-Pfo-097339	Poecilia formosa	45.12	4.00e-85	308.00
IUUC-Pab-098274	Pongo abelii	83.01	1.00e-168	585.00
IUUC-Pop-099705	Populus trichocarpa	24.46	1.00e-23	103.00
IUUC-Pca-100451	Procavia capensis	80.11	4.00e-174	603.00
IUUC-Ppe-101220	Prunus persica	30.24	7.00e-23	101.00
IUUC-Pva-102385	Pteropus vampyrus	81.89	3.00e-169	587.00
IUUC-Rno-105765	Rattus norvegicus	78.83	6.00e-161	559.00
IUUC-Sha-106533	Sarcophilus harrisii	71.03	2.00e-153	534.00
IUUC-Smo-109248	Selaginella moellendorffii	27.49	2.00e-28	119.00
IUUC-Sit-110297	Setaria italica	25.71	3.00e-20	92.00
IUUC-Sly-111617	Solanum lycopersicum	28.57	4.00e-21	95.50
IUUC-Stu-112531	Solanum tuberosum	28.57	8.00e-21	94.40
IUUC-Sar-113647	Sorex araneus	79.67	2.00e-169	587.00
IUUC-Sbi-114621	Sorghum bicolor	26.72	3.00e-24	105.00
IUUC-Tgu-116482	Taeniopygia guttata	65.08	4.00e-125	441.00
IUUC-Tru-118622	Takifugu rubripes	48.91	4.00e-88	318.00
IUUC-Tsy-119474	Tarsius syrichta	80.22	2.00e-173	601.00
IUUC-Tni-120250	Tetraodon nigroviridis	46.59	3.00e-78	285.00
IUUC-Tca-121583	Theobroma cacao	27.72	1.00e-28	120.00
IUUC-Tae-125758	Triticum aestivum	32.70	2.00e-20	93.60
IUUC-Tur-126076	Triticum urartu	27.22	2.00e-11	63.50
IUUC-Tbe-127545	Tupaia belangeri	82.40	6.00e-168	583.00
IUUC-Ttr-128497	Tursiops truncatus	81.67	7.00e-164	569.00
IUUC-Vpa-130772	Vicugna pacos	82.17	1.00e-166	578.00
IUUC-Vvi-131632	Vitis vinifera	24.94	3.00e-26	112.00
IUUC-Xma-133432	Xiphophorus maculatus	45.67	6.00e-89	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence