iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Post-translational Modifications (PTMs)
PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-22	80.0	239	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHt +v+ ++f ++  ll++G++Dg i++WD+
   Q: 239  GHTLGVSQVCFlPEsSLLLTGGNDGRIRLWDV 270
           8999********8889***************7 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MAVKWTGGHS SSILCLNANK DGLVASGGEG GDLVAWGEDG TPLGHMQLEG ADDVTSVLFS 60
ASCPTKLYAS HGETISVLDV RSLKGSLDHF HVNEEEINCL SLNETESLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAGGTCAT CGCTCGGCGC CACCGGGAAC GGGAAGCCCA GGTATGAGGC TGTTGGCCAG 60
CGGGGTTCGG ATCTGTTCGC AAGTGCTTTT TTTCTGTTTT TCCTCTAATG GCCTTGACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

mmu:68980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	24.15	1.00e-17	84.30
IUUC-Aml-001203	Ailuropoda melanoleuca	84.92	6.00e-175	606.00
IUUC-Atr-002680	Amborella trichopoda	25.00	5.00e-23	102.00
IUUC-Apl-003656	Anas platyrhynchos	57.98	2.00e-104	372.00
IUUC-Aca-004987	Anolis carolinensis	61.34	4.00e-123	434.00
IUUC-Aly-006254	Arabidopsis lyrata	31.68	4.00e-30	125.00
IUUC-Ath-006632	Arabidopsis thaliana	29.93	2.00e-28	119.00
IUUC-Ame-011032	Astyanax mexicanus	46.92	6.00e-90	324.00
IUUC-Bta-012588	Bos taurus	77.93	2.00e-155	541.00
IUUC-Bdi-014532	Brachypodium distachyon	25.98	1.00e-26	114.00
IUUC-Bol-015542	Brassica oleracea	28.52	1.00e-21	99.00
IUUC-Bra-017046	Brassica rapa	31.23	3.00e-29	124.00
IUUC-Cja-019365	Callithrix jacchus	85.20	0.00e+00	636.00
IUUC-Cfa-021090	Canis familiaris	84.36	2.00e-174	604.00
IUUC-Cpo-021517	Cavia porcellus	79.67	5.00e-171	593.00
IUUC-Csa-023041	Chlorocebus sabaeus	84.08	4.00e-175	607.00
IUUC-Cho-024801	Choloepus hoffmanni	81.01	3.00e-174	603.00
IUUC-Dre-028437	Danio rerio	46.52	6.00e-85	307.00
IUUC-Dno-029267	Dasypus novemcinctus	82.12	5.00e-176	610.00
IUUC-Ete-032726	Echinops telfairi	67.04	5.00e-140	490.00
IUUC-Eca-033621	Equus caballus	83.99	3.00e-166	577.00
IUUC-Eeu-034461	Erinaceus europaeus	75.14	8.00e-156	543.00
IUUC-Fca-036410	Felis catus	83.94	9.00e-171	592.00
IUUC-Fal-036676	Ficedula albicollis	64.25	3.00e-127	447.00
IUUC-Gmo-039597	Gadus morhua	34.69	3.00e-15	76.30
IUUC-Gga-040760	Gallus gallus	62.31	1.00e-69	255.00
IUUC-Gac-041905	Gasterosteus aculeatus	47.33	8.00e-89	320.00
IUUC-Gma-043066	Glycine max	23.76	3.00e-19	89.70
IUUC-Ggo-044881	Gorilla gorilla	84.08	2.00e-174	605.00
IUUC-Hsa-046836	Homo sapiens	83.52	1.00e-173	602.00
IUUC-Hvu-047651	Hordeum vulgare	25.65	2.00e-25	109.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	84.87	6.00e-174	603.00
IUUC-Lch-050406	Latimeria chalumnae	52.69	4.00e-91	327.00
IUUC-Loc-052878	Lepisosteus oculatus	53.17	3.00e-96	345.00
IUUC-Laf-053547	Loxodonta africana	80.73	4.00e-172	597.00
IUUC-Mcc-054646	Macaca mulatta	83.52	7.00e-174	602.00
IUUC-Meu-056381	Macropus eugenii	72.35	3.00e-156	544.00
IUUC-Mtr-058656	Medicago truncatula	26.12	2.00e-19	90.50
IUUC-Mmr-061601	Microcebus murinus	82.35	2.00e-177	614.00
IUUC-Mdo-062305	Monodelphis domestica	71.79	2.00e-155	541.00
IUUC-Mac-064940	Musa acuminata	23.63	1.00e-27	117.00
IUUC-Mpu-066629	Mustela putorius furo	83.24	1.00e-172	598.00
IUUC-Nle-069860	Nomascus leucogenys	83.52	2.00e-173	601.00
IUUC-Opr-071180	Ochotona princeps	79.49	1.00e-143	502.00
IUUC-Ont-071912	Oreochromis niloticus	47.16	7.00e-95	340.00
IUUC-Ocu-074874	Oryctolagus cuniculus	81.84	8.00e-177	612.00
IUUC-Obr-076835	Oryza brachyantha	32.70	1.00e-19	90.50
IUUC-Ogu-077977	Oryza glumaepatula	28.12	2.00e-12	66.60
IUUC-Oin-079206	Oryza indica	26.65	4.00e-22	99.00
IUUC-Opu-083256	Oryza punctata	23.94	9.00e-15	74.30
IUUC-Osa-085892	Oryza sativa	26.65	4.00e-22	99.00
IUUC-Ola-086701	Oryzias latipes	46.60	1.00e-87	316.00
IUUC-Oga-088152	Otolemur garnettii	83.75	3.00e-177	614.00
IUUC-Oar-089681	Ovis aries	81.01	4.00e-165	573.00
IUUC-Ptr-091142	Pan troglodytes	83.80	2.00e-174	604.00
IUUC-Pan-092435	Papio anubis	83.52	4.00e-167	580.00
IUUC-Psi-093255	Pelodiscus sinensis	68.54	2.00e-144	504.00
IUUC-Ppa-095829	Physcomitrella patens	29.54	1.00e-30	127.00
IUUC-Pfo-097339	Poecilia formosa	46.17	2.00e-84	305.00
IUUC-Pab-098274	Pongo abelii	82.68	7.00e-169	586.00
IUUC-Pop-099705	Populus trichocarpa	25.61	1.00e-27	116.00
IUUC-Pca-100451	Procavia capensis	79.78	9.00e-173	599.00
IUUC-Ppe-101220	Prunus persica	25.63	5.00e-26	111.00
IUUC-Pva-102385	Pteropus vampyrus	83.24	1.00e-172	598.00
IUUC-Rno-105765	Rattus norvegicus	94.41	0.00e+00	660.00
IUUC-Sha-106533	Sarcophilus harrisii	70.95	9.00e-155	539.00
IUUC-Smo-109248	Selaginella moellendorffii	27.11	1.00e-26	113.00
IUUC-Sit-110297	Setaria italica	24.84	1.00e-20	93.60
IUUC-Sly-111617	Solanum lycopersicum	32.20	6.00e-25	108.00
IUUC-Stu-112531	Solanum tuberosum	32.20	1.00e-24	107.00
IUUC-Sar-113647	Sorex araneus	77.93	3.00e-165	574.00
IUUC-Sbi-114621	Sorghum bicolor	26.44	5.00e-26	112.00
IUUC-Tgu-116482	Taeniopygia guttata	65.64	1.00e-123	436.00
IUUC-Tru-118622	Takifugu rubripes	48.63	1.00e-84	306.00
IUUC-Tsy-119474	Tarsius syrichta	80.45	4.00e-175	607.00
IUUC-Tni-120250	Tetraodon nigroviridis	46.32	3.00e-74	271.00
IUUC-Tca-121583	Theobroma cacao	27.97	1.00e-29	123.00
IUUC-Tae-125758	Triticum aestivum	26.70	1.00e-25	110.00
IUUC-Tbe-127545	Tupaia belangeri	81.23	5.00e-167	580.00
IUUC-Ttr-128497	Tursiops truncatus	81.84	4.00e-167	580.00
IUUC-Vpa-130772	Vicugna pacos	81.84	9.00e-168	582.00
IUUC-Vvi-131632	Vitis vinifera	25.56	2.00e-29	123.00
IUUC-Xma-133432	Xiphophorus maculatus	44.79	6.00e-85	307.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence