iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106533

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01108018

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000010019.1	ENSSHAT00000011759.1	ENSSHAP00000011663.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-26	91.8	238	273

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gHt +v+ ++f +d   l++G++Dg++++WD+++ v
   Q: 238  GHTLGVSQVHFlPDsYWLLTGGNDGKVMLWDVTSKV 273
           8999********99899***************9876 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MAVKWTGGHS SPILCLDANK EGLVASGAEG GDLLTWSQEG IPLGQIQFQG TDDVTCVRFS 60
PTCPNKLYAS HGEVISILDV RSFKGSIDSF HVNEEEINCL SLNETENFLA SADDSGTIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGGGCGTCC GCCGCCCCCG CCCCACTGGG GGCAACGGAC GCTGCGTCCG CGCGGTCGCC 60
TCGGCAGCCC CGTCACTCTG CGGCCCTCCC TTCTCCCCGA GCTTTCTCGC CGGCTCTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

shr:100914115

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	27.09	6.00e-14	72.00
IUUC-Aml-001203	Ailuropoda melanoleuca	75.14	5.00e-154	536.00
IUUC-Atr-002680	Amborella trichopoda	26.51	3.00e-24	105.00
IUUC-Apl-003656	Anas platyrhynchos	56.78	4.00e-104	370.00
IUUC-Aca-004987	Anolis carolinensis	63.28	1.00e-124	439.00
IUUC-Aly-006254	Arabidopsis lyrata	31.58	9.00e-29	120.00
IUUC-Ath-006632	Arabidopsis thaliana	30.39	5.00e-27	114.00
IUUC-Ame-011032	Astyanax mexicanus	48.83	4.00e-98	351.00
IUUC-Bta-012588	Bos taurus	71.23	4.00e-140	490.00
IUUC-Bdi-014532	Brachypodium distachyon	27.18	2.00e-24	106.00
IUUC-Bol-015542	Brassica oleracea	28.10	4.00e-20	93.20
IUUC-Bra-017046	Brassica rapa	30.79	4.00e-27	116.00
IUUC-Cja-019365	Callithrix jacchus	76.26	7.00e-163	566.00
IUUC-Cfa-021090	Canis familiaris	75.14	1.00e-155	542.00
IUUC-Cpo-021517	Cavia porcellus	71.03	2.00e-153	534.00
IUUC-Csa-023041	Chlorocebus sabaeus	74.86	8.00e-154	536.00
IUUC-Cho-024801	Choloepus hoffmanni	73.74	2.00e-157	548.00
IUUC-Dre-028437	Danio rerio	44.85	1.00e-87	316.00
IUUC-Dno-029267	Dasypus novemcinctus	74.30	5.00e-160	556.00
IUUC-Ete-032726	Echinops telfairi	63.69	1.00e-129	456.00
IUUC-Eca-033621	Equus caballus	74.72	1.00e-148	519.00
IUUC-Eeu-034461	Erinaceus europaeus	67.32	1.00e-143	502.00
IUUC-Fca-036410	Felis catus	75.98	8.00e-155	539.00
IUUC-Fal-036676	Ficedula albicollis	62.99	4.00e-129	454.00
IUUC-Gmo-039597	Gadus morhua	36.05	9.00e-19	87.40
IUUC-Gga-040760	Gallus gallus	64.80	2.00e-72	264.00
IUUC-Gac-041905	Gasterosteus aculeatus	48.65	5.00e-92	330.00
IUUC-Gma-043066	Glycine max	29.13	2.00e-16	79.70
IUUC-Ggo-044881	Gorilla gorilla	75.14	4.00e-154	536.00
IUUC-Hsa-046836	Homo sapiens	74.58	2.00e-152	531.00
IUUC-Hvu-047651	Hordeum vulgare	26.79	3.00e-24	105.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	75.63	6.00e-154	536.00
IUUC-Lch-050406	Latimeria chalumnae	54.47	8.00e-97	347.00
IUUC-Lpe-051023	Leersia perrieri	22.89	1.00e-09	57.40
IUUC-Loc-052878	Lepisosteus oculatus	54.72	4.00e-104	370.00
IUUC-Laf-053547	Loxodonta africana	74.51	5.00e-156	543.00
IUUC-Mcc-054646	Macaca mulatta	74.30	1.00e-152	532.00
IUUC-Meu-056381	Macropus eugenii	89.64	0.00e+00	664.00
IUUC-Mtr-058656	Medicago truncatula	30.10	8.00e-18	84.70
IUUC-Mmr-061601	Microcebus murinus	74.23	6.00e-159	553.00
IUUC-Mdo-062305	Monodelphis domestica	87.68	0.00e+00	651.00
IUUC-Mmu-063213	Mus musculus	69.27	2.00e-148	517.00
IUUC-Mac-064940	Musa acuminata	27.50	4.00e-28	118.00
IUUC-Mpu-066629	Mustela putorius furo	74.58	2.00e-154	537.00
IUUC-Nle-069860	Nomascus leucogenys	74.86	5.00e-153	533.00
IUUC-Opr-071180	Ochotona princeps	69.30	4.00e-122	431.00
IUUC-Ont-071912	Oreochromis niloticus	48.06	2.00e-98	352.00
IUUC-Ocu-074874	Oryctolagus cuniculus	74.86	3.00e-160	557.00
IUUC-Oba-075815	Oryza barthii	29.59	2.00e-15	76.60
IUUC-Obr-076835	Oryza brachyantha	34.81	5.00e-22	97.80
IUUC-Ogu-077977	Oryza glumaepatula	29.59	2.00e-15	76.60
IUUC-Oin-079206	Oryza indica	27.01	7.00e-24	104.00
IUUC-Olo-080621	Oryza longistaminata	28.87	1.00e-13	70.50
IUUC-Ome-081261	Oryza meridionalis	30.56	4.00e-14	72.00
IUUC-Opu-083256	Oryza punctata	29.08	9.00e-15	74.30
IUUC-Osa-085892	Oryza sativa	27.01	7.00e-24	104.00
IUUC-Ola-086701	Oryzias latipes	47.00	3.00e-94	338.00
IUUC-Olu-087593	Ostreococcus lucimarinus	20.77	1.00e-08	54.30
IUUC-Oga-088152	Otolemur garnettii	74.79	5.00e-159	553.00
IUUC-Oar-089681	Ovis aries	73.46	3.00e-146	511.00
IUUC-Ptr-091142	Pan troglodytes	74.86	4.00e-153	533.00
IUUC-Pan-092435	Papio anubis	74.30	1.00e-144	505.00
IUUC-Psi-093255	Pelodiscus sinensis	70.70	6.00e-153	533.00
IUUC-Ppa-095829	Physcomitrella patens	30.58	8.00e-26	110.00
IUUC-Pfo-097339	Poecilia formosa	46.17	7.00e-89	320.00
IUUC-Pab-098274	Pongo abelii	74.02	5.00e-150	523.00
IUUC-Pop-099705	Populus trichocarpa	24.66	3.00e-24	105.00
IUUC-Pca-100451	Procavia capensis	74.16	4.00e-159	553.00
IUUC-Ppe-101220	Prunus persica	26.43	2.00e-27	116.00
IUUC-Pva-102385	Pteropus vampyrus	75.70	5.00e-156	543.00
IUUC-Rno-105765	Rattus norvegicus	68.99	2.00e-148	518.00
IUUC-Smo-109248	Selaginella moellendorffii	28.80	1.00e-32	133.00
IUUC-Sit-110297	Setaria italica	39.52	3.00e-21	95.10
IUUC-Sly-111617	Solanum lycopersicum	31.07	4.00e-24	105.00
IUUC-Stu-112531	Solanum tuberosum	31.07	7.00e-24	104.00
IUUC-Sar-113647	Sorex araneus	69.83	2.00e-151	528.00
IUUC-Sbi-114621	Sorghum bicolor	27.30	3.00e-26	112.00
IUUC-Tgu-116482	Taeniopygia guttata	61.80	1.00e-119	422.00
IUUC-Tru-118622	Takifugu rubripes	47.40	7.00e-86	310.00
IUUC-Tsy-119474	Tarsius syrichta	74.30	2.00e-159	555.00
IUUC-Tni-120250	Tetraodon nigroviridis	43.99	2.00e-78	285.00
IUUC-Tca-121583	Theobroma cacao	25.31	7.00e-26	111.00
IUUC-Tae-123764	Triticum aestivum	32.64	5.00e-24	105.00
IUUC-Tur-126076	Triticum urartu	25.70	3.00e-11	62.40
IUUC-Tbe-127545	Tupaia belangeri	75.63	6.00e-153	533.00
IUUC-Ttr-128497	Tursiops truncatus	74.58	3.00e-150	523.00
IUUC-Vpa-130772	Vicugna pacos	74.58	1.00e-151	528.00
IUUC-Vvi-131632	Vitis vinifera	24.63	5.00e-27	115.00
IUUC-Xma-133432	Xiphophorus maculatus	45.95	1.00e-91	329.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence