iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069670

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01197573

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000012712.2	ENSNLET00000016227.2	ENSNLEP00000015440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-21	75.5	322	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcla.fsdtllvsGsdDgtikvWDlrtg 33
           H + v  +a ++++ l+s+s Dg++++W+lr+ 
   Q: 322  HDSNVLHIAkLPNRQLISCSEDGSVRIWELREK 354
           666677776567799**************9875 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKSP LQTIGEEQTQ NPYTELLVLK AHHDIVRFLV QLDDYRFASA 60
GDDGIVVVWN AQTGEKLLEL NGHTQKITAI ITFPSLESFE EKNQLILTAS ADRTVIVWDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCCCGGCA ATCGCCGCAG CCGCCCCCGC CTTGGCCGCC GCTCCCCAAG CGACTGCCCA 60
AACTAAGCCT CTGTGGCTGG GTACGGGAGC GCTTTGGGGA CAAAGATTCT CCCTCAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

KEGG

nle:100582241

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	92.41	0.00e+00	875.00
IUUC-Apl-004087	Anas platyrhynchos	76.89	0.00e+00	647.00
IUUC-Aca-005359	Anolis carolinensis	72.05	0.00e+00	684.00
IUUC-Ame-010669	Astyanax mexicanus	43.50	1.00e-80	293.00
IUUC-Bta-013534	Bos taurus	89.98	0.00e+00	858.00
IUUC-Cja-019219	Callithrix jacchus	95.86	0.00e+00	880.00
IUUC-Cfa-020310	Canis familiaris	92.33	0.00e+00	847.00
IUUC-Cpo-021664	Cavia porcellus	91.05	0.00e+00	868.00
IUUC-Csa-024228	Chlorocebus sabaeus	97.60	0.00e+00	925.00
IUUC-Cho-024898	Choloepus hoffmanni	89.24	8.00e-118	417.00
IUUC-Dre-028538	Danio rerio	55.80	3.00e-132	464.00
IUUC-Dno-028861	Dasypus novemcinctus	90.67	0.00e+00	862.00
IUUC-Dor-030111	Dipodomys ordii	90.63	0.00e+00	867.00
IUUC-Ete-032444	Echinops telfairi	90.97	6.00e-168	583.00
IUUC-Eca-033676	Equus caballus	90.63	0.00e+00	857.00
IUUC-Eeu-034571	Erinaceus europaeus	81.05	0.00e+00	759.00
IUUC-Fca-035387	Felis catus	93.28	0.00e+00	878.00
IUUC-Fal-037310	Ficedula albicollis	75.68	0.00e+00	688.00
IUUC-Gmo-039224	Gadus morhua	54.38	4.00e-132	464.00
IUUC-Gga-040957	Gallus gallus	77.10	0.00e+00	702.00
IUUC-Gac-042385	Gasterosteus aculeatus	55.26	3.00e-142	498.00
IUUC-Ggo-044973	Gorilla gorilla	97.40	0.00e+00	920.00
IUUC-Hsa-046842	Homo sapiens	97.60	0.00e+00	926.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	94.72	0.00e+00	637.00
IUUC-Lch-049625	Latimeria chalumnae	64.40	8.00e-176	609.00
IUUC-Loc-052368	Lepisosteus oculatus	59.43	1.00e-156	545.00
IUUC-Laf-053678	Loxodonta africana	91.47	0.00e+00	864.00
IUUC-Mcc-055184	Macaca mulatta	97.30	0.00e+00	890.00
IUUC-Meu-056165	Macropus eugenii	78.00	0.00e+00	712.00
IUUC-Mga-060184	Meleagris gallopavo	74.68	2.00e-64	237.00
IUUC-Mmr-060965	Microcebus murinus	94.55	0.00e+00	891.00
IUUC-Mdo-062702	Monodelphis domestica	86.24	0.00e+00	828.00
IUUC-Mmu-063649	Mus musculus	81.25	4.00e-117	414.00
IUUC-Mpu-065747	Mustela putorius furo	91.72	0.00e+00	874.00
IUUC-Mlu-067873	Myotis lucifugus	92.39	0.00e+00	870.00
IUUC-Opr-070266	Ochotona princeps	81.10	0.00e+00	764.00
IUUC-Ont-071242	Oreochromis niloticus	55.19	1.00e-140	493.00
IUUC-Oan-072879	Ornithorhynchus anatinus	85.55	0.00e+00	788.00
IUUC-Ocu-074872	Oryctolagus cuniculus	67.78	2.00e-164	572.00
IUUC-Ola-087211	Oryzias latipes	48.68	2.00e-114	405.00
IUUC-Oga-088852	Otolemur garnettii	92.81	0.00e+00	886.00
IUUC-Oar-089812	Ovis aries	89.54	0.00e+00	852.00
IUUC-Ptr-091067	Pan troglodytes	98.26	0.00e+00	928.00
IUUC-Pan-091778	Papio anubis	97.39	0.00e+00	920.00
IUUC-Psi-093932	Pelodiscus sinensis	77.63	0.00e+00	709.00
IUUC-Pfo-096845	Poecilia formosa	55.00	6.00e-137	480.00
IUUC-Pab-097892	Pongo abelii	96.14	0.00e+00	811.00
IUUC-Pca-100567	Procavia capensis	68.41	2.00e-174	605.00
IUUC-Pva-102560	Pteropus vampyrus	90.20	0.00e+00	847.00
IUUC-Rno-105662	Rattus norvegicus	86.62	0.00e+00	824.00
IUUC-Sha-107058	Sarcophilus harrisii	84.80	0.00e+00	804.00
IUUC-Sar-113643	Sorex araneus	79.64	0.00e+00	699.00
IUUC-Ssc-115791	Sus scrofa	92.16	0.00e+00	873.00
IUUC-Tgu-117145	Taeniopygia guttata	77.46	0.00e+00	699.00
IUUC-Tru-117875	Takifugu rubripes	56.14	2.00e-144	505.00
IUUC-Tsy-119030	Tarsius syrichta	93.41	0.00e+00	709.00
IUUC-Tni-119761	Tetraodon nigroviridis	54.49	3.00e-138	484.00
IUUC-Tbe-127757	Tupaia belangeri	91.54	0.00e+00	768.00
IUUC-Ttr-128762	Tursiops truncatus	94.77	0.00e+00	900.00
IUUC-Vpa-130360	Vicugna pacos	93.90	0.00e+00	889.00
IUUC-Xtr-131954	Xenopus tropicalis	64.69	5.00e-170	590.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence