iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d031894	Zm00001d031894_T004	Zm00001d031894_T004
Zm00001d031894	Zm00001d031894_T006	Zm00001d031894_T006
Zm00001d031894	Zm00001d031894_T005	Zm00001d031894_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/UCH	2.90e-58	199.8	2	317

Active Site

Position(s)	Description	Evidence
82	Nucleophile	{ECO:0000256\|PIRSR:PIRSR038120-1}
155	Proton donor	{ECO:0000256\|PIRSR:PIRSR038120-1}

Domain Profile

DUB/UCH

   S: 7    ewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakqvig 96
           +w  +e dPg+ft+l+++  +k+  qv+elysLd + l+ + +p++gl+ll+k+ + ++ +            v +d+i ++ffa+q i+
   Q: 2    SWAAIENDPGVFTELLQQMQLKGL-QVDELYSLDLDALNDL-QPIYGLILLYKWRPPEKDEG----------PVIKDAIPNLFFANQIIN 79
           7***********************.****************.9************9888777..........345899************ PP
   S: 97   NsCatyAllsvllncedklldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfvsyvni 186
            +Cat+A++svlln       l ++l++lke+ k   pe k+la+ n   +++ +ns+ar+e+++e++  ++d     ++++hf+ yv++
   Q: 80   KACATQAIVSVLLNSPGI--TLSDELKKLKEFAKDLPPELKGLAIVNCASIRMLNNSFARSEASEEQKPPSGD-----DDVYHFINYVPV 162
           **************8776..89******************************************999888777.....699********* PP
   S: 187  ngrlyeldglkpfPldlgkk....keteelkdklkvvraflerikllesdeirfnllaivadrrviktlrlnvlkid............. 259
           +g lyeldglk+ P+ lgk+    ++   +   ++ v+   e i+l +++eirf+++ai ++r+ + t  ++ l+               
   Q: 163  DGVLYELDGLKEGPISLGKCpggvGDAGWWLRLAQPVI--KEHIDLFSQNEIRFSVMAILKNRKEMFTVEIKELQRKregllqqmgdpna 250
           *******************9887788999999999999..***********************9988888876666689*********** PP
   S: 260  .keLlkLlkdieseeekieaqlddekekrkkfkiddirRtenydeficifikdlaregilrklveet 325
            + + + l ++ +++e   +++  e+ek kk+k ++ rR++ny+ f++ f+k l ++++l+ l e+ 
   Q: 251  sRHVEQSLAEVAAQIESVTEKIIMEEEKVKKWKAENLRRKHNYVPFLFNFLKILEEKQQLKPLIEKA 317
           *88889999999999999999999***************************************9985 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSWAAIENDP GVFTELLQQM QLKGLQVDEL YSLDLDALND LQPIYGLILL YKWRPPEKDE 60
GPVIKDAIPN LFFANQIINK ACATQAIVSV LLNSPGITLS DELKKLKEFA KDLPPELKGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTGGAGCA AGCCTCTCAA CATGTCGTGG GCCGCAATCG AGAATGATCC TGGTAAAATT 60
ATTTTCTGTT GCCAAAACCA AAAAGTTACA TTTGTTTAGT TATATATTGC AAGTTTTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH
IPR017390--Ubiquitinyl_hydrolase_UCH37

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005622--C:intracellular
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

zma:100191319

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000878	Aegilops tauschii	79.42	5.00e-138	483.00
IUUC-Aml-001866	Ailuropoda melanoleuca	44.03	4.00e-72	264.00
IUUC-Atr-002966	Amborella trichopoda	63.28	4.00e-114	404.00
IUUC-Apl-003306	Anas platyrhynchos	40.52	4.00e-68	251.00
IUUC-Aca-004763	Anolis carolinensis	42.72	2.00e-71	261.00
IUUC-Aly-006047	Arabidopsis lyrata	59.94	7.00e-109	386.00
IUUC-Ath-006850	Arabidopsis thaliana	59.40	1.00e-107	382.00
IUUC-Ame-010791	Astyanax mexicanus	44.00	8.00e-75	273.00
IUUC-Bta-013251	Bos taurus	44.03	2.00e-72	265.00
IUUC-Bdi-014551	Brachypodium distachyon	83.59	4.00e-151	526.00
IUUC-Cel-018604	Caenorhabditis elegans	38.65	1.00e-56	212.00
IUUC-Cja-019768	Callithrix jacchus	39.88	2.00e-66	245.00
IUUC-Cfa-020207	Canis familiaris	44.03	4.00e-72	264.00
IUUC-Cpo-021925	Cavia porcellus	42.14	1.00e-66	246.00
IUUC-Csa-023958	Chlorocebus sabaeus	44.03	4.00e-72	264.00
IUUC-Csv-026149	Ciona savignyi	36.53	3.00e-58	218.00
IUUC-Cne-026955	Cryptococcus neoformans	30.27	2.00e-38	152.00
IUUC-Cme-027104	Cyanidioschyzon merolae	29.94	2.00e-37	148.00
IUUC-Dre-027409	Danio rerio	43.08	2.00e-74	271.00
IUUC-Dno-028921	Dasypus novemcinctus	44.03	1.00e-71	262.00
IUUC-Eca-033776	Equus caballus	43.19	3.00e-65	241.00
IUUC-Eeu-035305	Erinaceus europaeus	39.23	2.00e-30	125.00
IUUC-Fca-035846	Felis catus	40.58	2.00e-67	249.00
IUUC-Gmo-038499	Gadus morhua	40.19	3.00e-66	244.00
IUUC-Gga-040904	Gallus gallus	44.00	3.00e-76	277.00
IUUC-Gac-042058	Gasterosteus aculeatus	42.41	3.00e-72	265.00
IUUC-Hsa-046227	Homo sapiens	43.61	3.00e-72	264.00
IUUC-Itr-048989	Ictidomys tridecemlineatus	40.11	2.00e-67	249.00
IUUC-Lch-049829	Latimeria chalumnae	43.99	2.00e-72	265.00
IUUC-Loc-052264	Lepisosteus oculatus	42.27	1.00e-69	255.00
IUUC-Laf-053639	Loxodonta africana	44.03	4.00e-72	264.00
IUUC-Mcc-055506	Macaca mulatta	44.03	3.00e-72	265.00
IUUC-Mpo-057608	Magnaporthe poae	38.12	3.00e-26	111.00
IUUC-Mga-060178	Meleagris gallopavo	43.61	4.00e-69	254.00
IUUC-Mvi-060353	Microbotryum violaceum	36.53	4.00e-49	187.00
IUUC-Mmr-060738	Microcebus murinus	43.30	1.00e-71	262.00
IUUC-Mmu-063619	Mus musculus	44.03	4.00e-74	271.00
IUUC-Mac-065301	Musa acuminata	66.46	1.00e-123	435.00
IUUC-Mpu-066058	Mustela putorius furo	43.71	2.00e-72	265.00
IUUC-Mlu-067292	Myotis lucifugus	44.03	9.00e-73	266.00
IUUC-Nle-069013	Nomascus leucogenys	44.34	3.00e-73	268.00
IUUC-Opr-070628	Ochotona princeps	38.69	1.00e-62	232.00
IUUC-Ont-072688	Oreochromis niloticus	42.14	3.00e-71	261.00
IUUC-Ocu-074303	Oryctolagus cuniculus	43.71	3.00e-72	265.00
IUUC-Oba-075354	Oryza barthii	84.45	3.00e-147	514.00
IUUC-Obr-076886	Oryza brachyantha	83.08	2.00e-139	487.00
IUUC-Ogu-078511	Oryza glumaepatula	83.54	3.00e-146	510.00
IUUC-Olo-080482	Oryza longistaminata	84.15	7.00e-148	516.00
IUUC-Oni-082729	Oryza nivara	83.54	3.00e-145	507.00
IUUC-Opu-084139	Oryza punctata	84.15	2.00e-147	514.00
IUUC-Oru-084441	Oryza rufipogon	84.15	2.00e-147	514.00
IUUC-Osa-085606	Oryza sativa	84.15	2.00e-147	514.00
IUUC-Ola-087126	Oryzias latipes	43.08	2.00e-71	261.00
IUUC-Olu-087665	Ostreococcus lucimarinus	40.94	3.00e-60	224.00
IUUC-Oga-089140	Otolemur garnettii	39.94	7.00e-68	250.00
IUUC-Oar-090296	Ovis aries	43.81	2.00e-71	261.00
IUUC-Ptr-090566	Pan troglodytes	43.61	3.00e-72	264.00
IUUC-Pan-092052	Papio anubis	44.03	3.00e-72	265.00
IUUC-Psi-093723	Pelodiscus sinensis	42.95	6.00e-66	243.00
IUUC-Pfo-096210	Poecilia formosa	43.04	1.00e-72	266.00
IUUC-Pab-098463	Pongo abelii	44.03	4.00e-72	264.00
IUUC-Pop-099109	Populus trichocarpa	66.06	4.00e-120	423.00
IUUC-Sja-107732	Schizosaccharomyces japonicus	38.44	6.00e-55	207.00
IUUC-Spo-108371	Schizosaccharomyces pombe	40.36	6.00e-59	220.00
IUUC-Sit-110523	Setaria italica	89.62	2.00e-156	544.00
IUUC-Sly-110972	Solanum lycopersicum	64.35	6.00e-116	409.00
IUUC-Stu-112185	Solanum tuberosum	65.48	1.00e-126	445.00
IUUC-Sbi-114404	Sorghum bicolor	93.03	1.00e-160	558.00
IUUC-Ssc-115501	Sus scrofa	42.72	2.00e-67	248.00
IUUC-Tru-118388	Takifugu rubripes	43.04	6.00e-73	266.00
IUUC-Tsy-119109	Tarsius syrichta	43.61	2.00e-72	265.00
IUUC-Tni-120048	Tetraodon nigroviridis	43.04	5.00e-73	267.00
IUUC-Tca-121750	Theobroma cacao	65.27	7.00e-126	442.00
IUUC-Tae-123169	Triticum aestivum	82.73	6.00e-142	496.00
IUUC-Tur-126366	Triticum urartu	81.88	1.00e-135	476.00
IUUC-Tbe-127619	Tupaia belangeri	39.07	2.00e-49	188.00
IUUC-Vda-129912	Verticillium dahliae	35.74	1.00e-45	176.00
IUUC-Vvi-130881	Vitis vinifera	64.85	3.00e-119	421.00
IUUC-Xtr-131934	Xenopus tropicalis	43.73	2.00e-76	278.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence