iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131747

UUCD1 version

UUC-ViV-00197

Ensembl Protein ID

VIT_11s0016g02220.t01

UniProt Accession

D7TB79; D7TB79_VITVI

Genbank Protein ID

CBI27914.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595756

Gene Name

VIT_11s0016g02220

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_11s0016g02220	VIT_11s0016g02220.t01	VIT_11s0016g02220.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-41	139.5	105	142
UBD/Beta-Prp	1.30e-62	212.3	50	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H+dsv++l+f  ++ ll+sGs Dg +k+WD ++g+l +
   Q: 105  HKDSVFSLDFsmDGQLLASGSFDGLVKIWDASSGDLKC 142
           9*********96559***************99999876 PP

UBD/Beta-Prp

   S: 83   tgkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
           + + +h+++gh+ ++++++ sp +   +++G+ d+   +w++  g +  e     h+++v ++ ++ dg+ll+sGs D+ v++Wd ++
   Q: 50   ADDSMHIFTGHTGELYTVACSPIDpRLVATGGGDDKGFIWKILDGDWAFElGGMCHKDSVFSLDFSMDGQLLASGSFDGLVKIWDASS 137
           67889*****************77588889************9998887656788********************************* PP
   S: 169  gkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
           g+l  tl+g   + ++++ +++ g  +++gs+d tv +w+  +g  ++ + gh + v++ +f+p+++ + +gs+D ++riW+  sg++
   Q: 138  GDLKCTLEG-PGGGIEWVRWHPRGHVVLAGSEDCTVWMWNADRGAYLNMFSGHASSVTCGDFTPDGKTICTGSDDATLRIWNPSSGEN 224
           ********9.****************************************************************************** PP
   S: 257  lktlqlh 263
           ++++ +h
   Q: 225  IHVVRGH 231
           9999876 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNTPANHDED EDQGDVFLDE NDIVLEINVD DEDLPDAEDA DDDAEDVEEA DDSMHIFTGH 60
TGELYTVACS PIDPRLVATG GGDDKGFIWK ILDGDWAFEL GGMCHKDSVF SLDFSMDGQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATACTC CAGCCAACCA TGACGAAGAT GAGGATCAAG GGGATGTGTT TCTTGATGAA 60
AACGACATCG TTCTGGAAAT CAATGTCGAC GATGAAGGTG TAGTGCAGAT GGGGAGCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-011997	Blumeria graminis	27.42	1.00e-24	108.00
IUUC-Ete-033100	Echinops telfairi	42.33	4.00e-42	164.00
IUUC-Mac-065236	Musa acuminata	69.79	4.00e-141	493.00
IUUC-Opr-070337	Ochotona princeps	34.90	3.00e-47	181.00
IUUC-Oga-088864	Otolemur garnettii	34.97	5.00e-56	211.00
IUUC-Ppe-101979	Prunus persica	77.71	8.00e-159	552.00
IUUC-Pva-102400	Pteropus vampyrus	30.03	7.00e-44	170.00
IUUC-Pgr-103362	Puccinia graminis	31.55	1.00e-47	183.00
IUUC-Ssc-115726	Sus scrofa	40.85	2.00e-41	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence