iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fso-038240

Ensembl Protein ID

NechaP100539

UniProt Accession

C7YRJ2; C7YRJ2_NECH7

Genbank Protein ID

EEU45084.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

GG698899

Gene Name

NECHADRAFT_100539

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NechaG100539	NechaT100539	NechaP100539

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	33.09	7.00e-31	132.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Fusarium solani

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAAATESFIH LARPLAPNTV GLQTNLAPLT VNIQPQAVLS ILDHAVRRDI RDTQSTRVIG 60
ALVGTRSEDG TEVEVRSCFA IPHTEEEDQV EVDVEYQKNM LALTLKASPR EHLLGWYTTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCTG CTACCGAGAG CTTCATCCAC CTCGCGAGGC CTCTGGCGCC CAATACCGTC 60
GGACTCCAGA CTAACCTTGC CCCGCTCACG GTCAACATCC AGCCTCAGGT ACGATTGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

nhe:NECHADRAFT_100539

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	30.03	1.00e-27	115.00
IUUC-Aml-001527	Ailuropoda melanoleuca	32.97	2.00e-38	151.00
IUUC-Atr-002686	Amborella trichopoda	31.32	3.00e-26	110.00
IUUC-Apl-003977	Anas platyrhynchos	32.46	6.00e-35	138.00
IUUC-Aca-004335	Anolis carolinensis	31.64	1.00e-37	148.00
IUUC-Aly-005945	Arabidopsis lyrata	31.05	4.00e-31	126.00
IUUC-Ath-007045	Arabidopsis thaliana	30.32	5.00e-30	122.00
IUUC-Acl-008365	Aspergillus clavatus	62.01	3.00e-113	399.00
IUUC-Afl-008742	Aspergillus flavus	62.01	3.00e-108	382.00
IUUC-Afu-009030	Aspergillus fumigatus	63.64	1.00e-116	410.00
IUUC-Ani-009212	Aspergillus nidulans	62.66	4.00e-115	405.00
IUUC-Ang-009712	Aspergillus niger	62.01	5.00e-113	399.00
IUUC-Aor-009885	Aspergillus oryzae	61.69	4.00e-115	405.00
IUUC-Ate-010315	Aspergillus terreus	63.31	2.00e-109	386.00
IUUC-Ame-010801	Astyanax mexicanus	29.54	3.00e-25	107.00
IUUC-Bgr-011982	Blumeria graminis	70.00	1.00e-132	464.00
IUUC-Bta-012804	Bos taurus	33.33	6.00e-39	152.00
IUUC-Bci-013891	Botrytis cinerea	73.23	2.00e-130	456.00
IUUC-Bdi-014328	Brachypodium distachyon	29.43	1.00e-27	114.00
IUUC-Bol-015446	Brassica oleracea	32.62	4.00e-33	133.00
IUUC-Bra-016862	Brassica rapa	32.62	8.00e-33	132.00
IUUC-Cel-018171	Caenorhabditis elegans	27.40	3.00e-28	117.00
IUUC-Cja-019335	Callithrix jacchus	32.97	2.00e-38	151.00
IUUC-Cfa-020138	Canis familiaris	32.97	1.00e-38	151.00
IUUC-Cpo-022109	Cavia porcellus	30.74	4.00e-31	126.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	31.49	3.00e-37	147.00
IUUC-Csa-023994	Chlorocebus sabaeus	32.97	2.00e-38	151.00
IUUC-Cho-024351	Choloepus hoffmanni	24.64	2.00e-15	74.70
IUUC-Cin-025801	Ciona intestinalis	29.68	1.00e-38	151.00
IUUC-Csv-025805	Ciona savignyi	28.34	1.00e-35	141.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	84.09	7.00e-157	544.00
IUUC-Cne-026868	Cryptococcus neoformans	31.90	1.00e-40	157.00
IUUC-Cme-027328	Cyanidioschyzon merolae	23.49	4.00e-12	63.50
IUUC-Dre-028085	Danio rerio	32.37	2.00e-39	154.00
IUUC-Dno-030099	Dasypus novemcinctus	32.61	4.00e-38	150.00
IUUC-Dor-030324	Dipodomys ordii	28.16	1.00e-26	112.00
IUUC-Dse-031314	Dothistroma septosporum	63.28	2.00e-114	404.00
IUUC-Dme-031926	Drosophila melanogaster	26.69	2.00e-30	124.00
IUUC-Ete-032569	Echinops telfairi	31.16	5.00e-34	135.00
IUUC-Eca-033502	Equus caballus	31.97	7.00e-36	142.00
IUUC-Eeu-034883	Erinaceus europaeus	30.61	4.00e-11	59.30
IUUC-Fca-035873	Felis catus	32.97	2.00e-38	151.00
IUUC-Fal-036921	Ficedula albicollis	33.82	7.00e-42	162.00
IUUC-Fox-037765	Fusarium oxysporum	95.81	2.00e-170	589.00
IUUC-Gmo-038864	Gadus morhua	33.09	1.00e-39	154.00
IUUC-Ggr-039862	Gaeumannomyces graminis	74.19	3.00e-133	466.00
IUUC-Gga-040952	Gallus gallus	33.82	6.00e-42	162.00
IUUC-Gac-041677	Gasterosteus aculeatus	30.33	2.00e-39	154.00
IUUC-Gma-043061	Glycine max	31.32	6.00e-26	109.00
IUUC-Ggo-045591	Gorilla gorilla	32.97	2.00e-38	151.00
IUUC-Hsa-046860	Homo sapiens	32.97	2.00e-38	151.00
IUUC-Hvu-047410	Hordeum vulgare	26.71	2.00e-14	69.70
IUUC-Itr-048211	Ictidomys tridecemlineatus	32.97	2.00e-38	151.00
IUUC-Lch-049410	Latimeria chalumnae	44.23	2.00e-20	90.90
IUUC-Lpe-051102	Leersia perrieri	30.74	5.00e-28	116.00
IUUC-Loc-052016	Lepisosteus oculatus	28.67	1.00e-27	115.00
IUUC-Lma-053157	Leptosphaeria maculans	62.01	4.00e-116	409.00
IUUC-Laf-054568	Loxodonta africana	32.61	5.00e-38	149.00
IUUC-Mcc-054613	Macaca mulatta	32.97	1.00e-38	151.00
IUUC-Meu-056832	Macropus eugenii	29.13	3.00e-14	70.10
IUUC-Mor-057104	Magnaporthe oryzae	75.24	2.00e-142	496.00
IUUC-Mtr-058445	Medicago truncatula	30.69	4.00e-34	136.00
IUUC-Mla-059038	Melampsora laricipopulina	35.64	4.00e-41	159.00
IUUC-Mga-059548	Meleagris gallopavo	33.33	1.00e-37	147.00
IUUC-Mvi-060520	Microbotryum violaceum	29.70	1.00e-27	115.00
IUUC-Mdo-062376	Monodelphis domestica	33.33	4.00e-40	156.00
IUUC-Mmu-063254	Mus musculus	33.21	3.00e-38	150.00
IUUC-Mac-065635	Musa acuminata	31.14	1.00e-30	125.00
IUUC-Mpu-066314	Mustela putorius furo	32.97	2.00e-38	150.00
IUUC-Mlu-067512	Myotis lucifugus	33.33	8.00e-39	152.00
IUUC-Nfi-068262	Neosartorya fischeri	63.96	5.00e-117	412.00
IUUC-Ncr-068872	Neurospora crassa	74.76	5.00e-128	449.00
IUUC-Nle-070118	Nomascus leucogenys	32.97	2.00e-38	151.00
IUUC-Opr-071228	Ochotona princeps	31.97	9.00e-35	138.00
IUUC-Ont-072600	Oreochromis niloticus	32.37	3.00e-40	156.00
IUUC-Oan-073584	Ornithorhynchus anatinus	33.76	9.00e-37	144.00
IUUC-Ocu-074542	Oryctolagus cuniculus	32.97	1.00e-38	151.00
IUUC-Oba-075923	Oryza barthii	30.74	9.00e-30	122.00
IUUC-Obr-076313	Oryza brachyantha	31.39	3.00e-30	123.00
IUUC-Ogl-076932	Oryza glaberrima	30.74	9.00e-30	122.00
IUUC-Ogu-078152	Oryza glumaepatula	30.74	9.00e-30	122.00
IUUC-Oin-079528	Oryza indica	30.74	9.00e-30	122.00
IUUC-Olo-080401	Oryza longistaminata	30.74	9.00e-30	122.00
IUUC-Ome-081553	Oryza meridionalis	30.74	6.00e-30	122.00
IUUC-Oni-082090	Oryza nivara	30.63	6.00e-30	122.00
IUUC-Opu-083583	Oryza punctata	31.39	3.00e-29	120.00
IUUC-Oru-084492	Oryza rufipogon	30.74	9.00e-30	122.00
IUUC-Osa-085383	Oryza sativa	30.74	9.00e-30	122.00
IUUC-Ola-086835	Oryzias latipes	32.37	2.00e-40	157.00
IUUC-Olu-087716	Ostreococcus lucimarinus	26.42	4.00e-20	89.70
IUUC-Oga-088886	Otolemur garnettii	33.09	9.00e-39	152.00
IUUC-Oar-090079	Ovis aries	33.33	5.00e-39	152.00
IUUC-Ptr-091457	Pan troglodytes	32.97	2.00e-38	151.00
IUUC-Pan-092317	Papio anubis	26.84	3.00e-17	80.10
IUUC-Psi-093129	Pelodiscus sinensis	33.33	1.00e-37	148.00
IUUC-Pma-094488	Petromyzon marinus	33.33	4.00e-42	162.00
IUUC-Pno-095049	Phaeosphaeria nodorum	63.61	1.00e-118	417.00
IUUC-Ppa-095341	Physcomitrella patens	30.07	3.00e-40	156.00
IUUC-Pfo-096286	Poecilia formosa	31.53	1.00e-39	155.00
IUUC-Pab-097765	Pongo abelii	32.97	2.00e-38	151.00
IUUC-Pop-099131	Populus trichocarpa	29.89	9.00e-32	128.00
IUUC-Pca-100524	Procavia capensis	25.63	3.00e-19	86.70
IUUC-Ppe-101934	Prunus persica	30.94	6.00e-37	145.00
IUUC-Pva-102577	Pteropus vampyrus	32.97	5.00e-38	149.00
IUUC-Pgr-103521	Puccinia graminis	31.09	9.00e-35	138.00
IUUC-Pte-104304	Pyrenophora teres	63.31	2.00e-118	417.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	63.31	2.00e-118	416.00
IUUC-Rno-105717	Rattus norvegicus	33.21	3.00e-38	150.00
IUUC-Sha-107190	Sarcophilus harrisii	33.71	3.00e-39	153.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	42.95	5.00e-75	272.00
IUUC-Spo-108355	Schizosaccharomyces pombe	42.90	8.00e-76	275.00
IUUC-Smo-109374	Selaginella moellendorffii	31.41	1.00e-41	160.00
IUUC-Sit-110119	Setaria italica	30.69	3.00e-29	120.00
IUUC-Sly-111570	Solanum lycopersicum	26.32	2.00e-24	103.00
IUUC-Stu-112308	Solanum tuberosum	28.63	3.00e-30	123.00
IUUC-Sar-113515	Sorex araneus	52.17	4.00e-02	29.30
IUUC-Sbi-114605	Sorghum bicolor	30.32	8.00e-29	119.00
IUUC-Sre-114906	Sporisorium reilianum	39.14	6.00e-55	205.00
IUUC-Tgu-117087	Taeniopygia guttata	32.92	1.00e-36	144.00
IUUC-Tru-117700	Takifugu rubripes	32.73	2.00e-39	154.00
IUUC-Tsy-119553	Tarsius syrichta	24.68	4.70e-01	25.80
IUUC-Tni-120470	Tetraodon nigroviridis	33.09	2.00e-40	157.00
IUUC-Tca-121109	Theobroma cacao	29.77	7.00e-27	112.00
IUUC-Tre-122095	Trichoderma reesei	87.18	1.00e-156	543.00
IUUC-Tvi-122580	Trichoderma virens	87.82	6.00e-158	548.00
IUUC-Tae-125129	Triticum aestivum	31.67	7.00e-31	125.00
IUUC-Tur-126658	Triticum urartu	28.37	2.00e-25	107.00
IUUC-Tme-127043	Tuber melanosporum	56.49	1.00e-101	361.00
IUUC-Tbe-127927	Tupaia belangeri	32.97	2.00e-38	151.00
IUUC-Ttr-129231	Tursiops truncatus	33.33	6.00e-39	152.00
IUUC-Uma-129578	Ustilago maydis	39.14	1.00e-54	204.00
IUUC-Vda-129730	Verticillium dahliae	81.88	6.00e-155	538.00
IUUC-Vvi-130968	Vitis vinifera	30.60	9.00e-31	125.00
IUUC-Xtr-132203	Xenopus tropicalis	32.73	9.00e-41	158.00
IUUC-Xma-133972	Xiphophorus maculatus	31.65	6.00e-39	152.00
IUUC-Yli-134553	Yarrowia lipolytica	42.11	7.00e-61	225.00
IUUC-Zma-134941	Zea mays	28.88	1.00e-23	102.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence