iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000000109.1	ENSORLT00000000135.1	ENSORLP00000000135.1
ENSORLG00000000109.1	ENSORLT00000000137.1	ENSORLP00000000137.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-07	31.0	84	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           gHt+ ++cl++  s+ +l+s+ +Dg+ik+W+++++
   Q: 84   GHTEVISCLEWdqSGSRLLSADGDGQIKCWSMTDH 118
           8**********965599**************9986 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MLDMVWTRRL CSPLDMELAY VCDWEKRQKN AHCPSIPVVC SWSCRNLVAF TTDLKSDDNE 60
KDVSHMIHII DTEHPWDVFS INSGHTEVIS CLEWDQSGSR LLSADGDGQI KCWSMTDHLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTCGTATT TATGTTTTCT TTCTGAAGTC GTTCTTAAAA CTTCTTTCAG TTTTGGCTGT 60
TAACTTTTGA AAGCCAGTTT CAAATAGGTG AGTTCATCAT AATAGACTAA GTCAGCGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021665--Mediator_Med16
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11635--Med16

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011407	Astyanax mexicanus	78.97	0.00e+00	1331.00
IUUC-Bta-012729	Bos taurus	74.79	0.00e+00	1249.00
IUUC-Cja-019000	Callithrix jacchus	76.22	2.00e-77	281.00
IUUC-Cfa-020876	Canis familiaris	75.39	0.00e+00	1280.00
IUUC-Cpo-021655	Cavia porcellus	73.47	0.00e+00	1234.00
IUUC-Dre-027473	Danio rerio	84.06	0.00e+00	1396.00
IUUC-Dno-029564	Dasypus novemcinctus	76.08	0.00e+00	881.00
IUUC-Eca-033914	Equus caballus	75.81	0.00e+00	735.00
IUUC-Fca-036338	Felis catus	76.13	0.00e+00	675.00
IUUC-Fal-037249	Ficedula albicollis	76.23	0.00e+00	1325.00
IUUC-Gmo-039447	Gadus morhua	79.49	4.00e-179	621.00
IUUC-Gga-041100	Gallus gallus	76.37	0.00e+00	1249.00
IUUC-Gac-042603	Gasterosteus aculeatus	70.79	0.00e+00	1117.00
IUUC-Ggo-044794	Gorilla gorilla	76.87	0.00e+00	961.00
IUUC-Hsa-045722	Homo sapiens	74.51	0.00e+00	673.00
IUUC-Itr-048948	Ictidomys tridecemlineatus	75.21	0.00e+00	1268.00
IUUC-Loc-052871	Lepisosteus oculatus	85.01	0.00e+00	1410.00
IUUC-Mcc-055201	Macaca mulatta	76.81	0.00e+00	962.00
IUUC-Mga-059807	Meleagris gallopavo	72.61	0.00e+00	1218.00
IUUC-Mmr-060781	Microcebus murinus	73.94	0.00e+00	1275.00
IUUC-Mpu-066388	Mustela putorius furo	75.51	0.00e+00	1279.00
IUUC-Ont-072316	Oreochromis niloticus	91.00	0.00e+00	1492.00
IUUC-Oga-088875	Otolemur garnettii	75.73	0.00e+00	1268.00
IUUC-Oar-090444	Ovis aries	75.75	0.00e+00	1272.00
IUUC-Ptr-091117	Pan troglodytes	73.19	0.00e+00	664.00
IUUC-Pan-091807	Papio anubis	74.97	0.00e+00	1200.00
IUUC-Pfo-097356	Poecilia formosa	90.41	0.00e+00	1486.00
IUUC-Pab-097953	Pongo abelii	76.11	0.00e+00	931.00
IUUC-Pca-100896	Procavia capensis	74.24	0.00e+00	1236.00
IUUC-Rno-105038	Rattus norvegicus	74.67	0.00e+00	1271.00
IUUC-Tgu-116750	Taeniopygia guttata	75.99	0.00e+00	1318.00
IUUC-Tru-118405	Takifugu rubripes	89.94	0.00e+00	1508.00
IUUC-Tni-120217	Tetraodon nigroviridis	89.51	0.00e+00	1120.00
IUUC-Ttr-129222	Tursiops truncatus	74.73	0.00e+00	1225.00
IUUC-Xtr-132084	Xenopus tropicalis	74.58	0.00e+00	1208.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence