iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000032280.16	ENSMUST00000159386.7	ENSMUSP00000125049.1
ENSMUSG00000032280.16	ENSMUST00000034820.15	ENSMUSP00000034820.9
ENSMUSG00000032280.16	ENSMUST00000162583.7	ENSMUSP00000124977.1
ENSMUSG00000032280.16	ENSMUST00000161993.7	ENSMUSP00000124432.1
ENSMUSG00000032280.16	ENSMUST00000160882.7	ENSMUSP00000124131.1
ENSMUSG00000032280.16	ENSMUST00000160724.7	ENSMUSP00000124055.1
ENSMUSG00000032280.16	ENSMUST00000162973.7	ENSMUSP00000124173.1
ENSMUSG00000032280.16	ENSMUST00000159050.7	ENSMUSP00000125032.1
ENSMUSG00000032280.16	ENSMUST00000161207.7	ENSMUSP00000124557.1
ENSMUSG00000032280.16	ENSMUST00000159630.7	ENSMUSP00000123723.1
ENSMUSG00000032280.16	ENSMUST00000162127.1	ENSMUSP00000124150.1
ENSMUSG00000032280.16	ENSMUST00000178113.7	ENSMUSP00000136010.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	RAID2
Post-translational Modifications (PTMs)
PHOSIDA	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-21	76.2	627	665

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtd+ +c++  +d t l++G+ D+t++ WDlr+g++l+
   Q: 627  GHTDGASCIDIsHDgTKLWTGGLDNTVRSWDLREGRQLQ 665
           8**********9888*********************998 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MYPQGRHPAP HQPGQPGFKF TVAESCDRIK DEFQFLQAQY HSLKVEYDKL ANEKTEMQRH 60
YVMYYEMSYG LNIEMHKQTE IAKRLNTILA QIMPFLSQEH QQQVAQAVER AKQVTMTELN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCCCTATT TGGAACTGCT CTCGCGGCAG TTCAGACCTC GTGCTCGGCC CCCTTCGCCT 60
GTCTGTGTGT GGTATCCGCA GGTCCGAGGC ACTTTTTTTT TTTTTTGAGT GCGTGTACGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005617--Groucho/TLE_N
IPR009146--Groucho_enhance
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03920--TLE_N
PF00400--WD40

PRINTS

PR01850--GROUCHOFAMLY

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002200	Ailuropoda melanoleuca	96.55	0.00e+00	1357.00
IUUC-Aca-005074	Anolis carolinensis	91.32	0.00e+00	1042.00
IUUC-Ame-010724	Astyanax mexicanus	89.10	0.00e+00	1269.00
IUUC-Bta-013189	Bos taurus	97.06	0.00e+00	1372.00
IUUC-Cja-018781	Callithrix jacchus	97.19	0.00e+00	1380.00
IUUC-Cfa-021016	Canis familiaris	96.72	0.00e+00	1287.00
IUUC-Cpo-021793	Cavia porcellus	95.15	0.00e+00	1347.00
IUUC-Csa-023928	Chlorocebus sabaeus	96.81	0.00e+00	1368.00
IUUC-Dre-028595	Danio rerio	90.55	0.00e+00	1258.00
IUUC-Dno-029736	Dasypus novemcinctus	92.65	0.00e+00	1040.00
IUUC-Dor-030787	Dipodomys ordii	90.85	0.00e+00	1046.00
IUUC-Ete-032685	Echinops telfairi	94.12	0.00e+00	1291.00
IUUC-Eca-033249	Equus caballus	95.92	0.00e+00	1342.00
IUUC-Fca-036239	Felis catus	96.81	0.00e+00	1254.00
IUUC-Gmo-039000	Gadus morhua	82.19	0.00e+00	1117.00
IUUC-Gac-042392	Gasterosteus aculeatus	88.78	0.00e+00	1283.00
IUUC-Ggo-044458	Gorilla gorilla	96.26	0.00e+00	1388.00
IUUC-Hsa-046549	Homo sapiens	97.32	0.00e+00	1382.00
IUUC-Itr-048755	Ictidomys tridecemlineatus	98.28	0.00e+00	1196.00
IUUC-Lch-050110	Latimeria chalumnae	90.56	0.00e+00	1224.00
IUUC-Loc-052165	Lepisosteus oculatus	90.32	0.00e+00	1260.00
IUUC-Laf-053817	Loxodonta africana	95.91	0.00e+00	1385.00
IUUC-Mcc-055673	Macaca mulatta	98.08	0.00e+00	1404.00
IUUC-Meu-056601	Macropus eugenii	94.00	0.00e+00	1352.00
IUUC-Mga-059792	Meleagris gallopavo	82.97	0.00e+00	1014.00
IUUC-Mmr-060904	Microcebus murinus	98.34	0.00e+00	1400.00
IUUC-Mdo-061897	Monodelphis domestica	91.44	0.00e+00	1320.00
IUUC-Mpu-066618	Mustela putorius furo	97.06	0.00e+00	1372.00
IUUC-Mlu-067934	Myotis lucifugus	96.04	0.00e+00	1349.00
IUUC-Nle-069452	Nomascus leucogenys	96.81	0.00e+00	1367.00
IUUC-Opr-070854	Ochotona princeps	90.96	0.00e+00	1185.00
IUUC-Ont-071499	Oreochromis niloticus	90.05	0.00e+00	1281.00
IUUC-Ocu-074091	Oryctolagus cuniculus	96.54	0.00e+00	1330.00
IUUC-Ola-086424	Oryzias latipes	88.42	0.00e+00	1245.00
IUUC-Oga-088548	Otolemur garnettii	94.82	0.00e+00	1361.00
IUUC-Oar-089856	Ovis aries	94.89	0.00e+00	1340.00
IUUC-Ptr-090848	Pan troglodytes	96.81	0.00e+00	1367.00
IUUC-Pan-092288	Papio anubis	96.17	0.00e+00	1352.00
IUUC-Psi-093427	Pelodiscus sinensis	92.95	0.00e+00	1298.00
IUUC-Pfo-096880	Poecilia formosa	86.50	0.00e+00	1228.00
IUUC-Pab-098175	Pongo abelii	96.93	0.00e+00	1370.00
IUUC-Pca-100321	Procavia capensis	95.91	0.00e+00	1375.00
IUUC-Pva-102741	Pteropus vampyrus	91.07	0.00e+00	1271.00
IUUC-Rno-104864	Rattus norvegicus	97.06	0.00e+00	1350.00
IUUC-Sha-106568	Sarcophilus harrisii	95.40	0.00e+00	1336.00
IUUC-Sar-113414	Sorex araneus	93.56	0.00e+00	632.00
IUUC-Ssc-116160	Sus scrofa	96.14	0.00e+00	1370.00
IUUC-Tru-117982	Takifugu rubripes	83.82	0.00e+00	1245.00
IUUC-Tni-120823	Tetraodon nigroviridis	88.78	0.00e+00	1262.00
IUUC-Ttr-128845	Tursiops truncatus	97.32	0.00e+00	1405.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence