iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037660

Ensembl Protein ID

ENSFALP00000004704.1

UniProt Accession

U3JPK0; U3JPK0_FICAL

Genbank Protein ID

ENSFALP00000004704

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01010726

Gene Name

WDR90

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000004520.1	ENSFALT00000004728.1	ENSFALP00000004704.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-39	131.0	1517	1548
UBD/Beta-Prp	2.40e-83	279.4	1353	1693

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+++vt ++f +d  + ++++ Dg++++W l
   Q: 1517 GHKNKVTEVCFsPDeSHCATCGEDGSVRIWAL 1548
           8***********999***************86 PP

UBD/Beta-Prp

   S: 32   gtikvwdvttgkllrslsgheae.........vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdkl 109
           g +  w ++++    s + h a+          t++++  d+ +l tg + + i+vwd +t++c++t+++ e ++  l   +   +l
   Q: 1353 GAVMFWLLEQQGDAVSPKVHRAPvpdvlglveLTSLCYGADA-LLYTGTNSGQICVWDTETNSCFMTWEADEGEIGVLLCRQ--PRL 1436
           555555555555545555555555566666558999999998.999*****************************9999999..9** PP
   S: 110  vsGshdrtirvwdletgqclee.......................................................tlsghdgvvn 141
           vsGs+ + ir+w + t q+l+                                                        + sgh+  v+
   Q: 1437 VSGSNTKRIRLWSVATVQELRLkgpharcgsvlleheitldgtivsaafddslemgivgttagtlwyinwvestsirLISGHKNKVT 1523
           *******************98899***************************************************99********** PP
   S: 142  cvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..........kelvsgsldgtvklwdlqtgecvrtl 218
            v+++pd++ +++++ D+ vr+W l + +l+ +++   ++s ++l++++            +++v+g  dgtv++++++++e+  ++
   Q: 1524 EVCFSPDESHCATCGEDGSVRIWALGSTELVVQFQV-LNQSCQCLAWKPRPvgvwpcpgesQHVVAGYSDGTVRVFSVSRTEMELKM 1609
           **********************************98.*********888778888888888************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn.ssvisvav.......lsfgdnvlvlgse.dskvniwk 293
           + h +  + +  s ++e ++sg++Dg + +   r+g ++++l+ h+ s ++  ++       l++++ +l l+s+ d +v +w 
   Q: 1610 HPHAAALTAITYSTDGEMILSGGKDGIVALSSPRTGMTIHVLADHRgSPITVLQCtrkqyhdLGVEGGELWLASSsDRRVSVWG 1693
           **********************************************666777777888887777778888888877******95 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MIPVLAAWQR PYLNIFKHFR VEEWKRSAKE GDVAALTDTR LKGTIYRIRG SNPASSYLQL 60
PRAGTQSLGL TGRYLYLLFR PLPRKHFLVH LDVTTEENQV VRISFSSLFK EFKSTATWLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCTGGGGATG 60
GGGGAAGCGA GCCGGTGGGG CTGTGAGAGG TCGGAGCACG GGCGTGCCGG GAGTGTCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR007714--CFA20/WDR90/C3orf67
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05018--DUF667
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001801	Ailuropoda melanoleuca	54.60	0.00e+00	1805.00
IUUC-Apl-003387	Anas platyrhynchos	74.43	0.00e+00	2426.00
IUUC-Aca-005235	Anolis carolinensis	61.47	0.00e+00	1949.00
IUUC-Ame-011595	Astyanax mexicanus	52.36	0.00e+00	1436.00
IUUC-Bta-012328	Bos taurus	54.74	0.00e+00	1745.00
IUUC-Cja-019058	Callithrix jacchus	55.21	0.00e+00	914.00
IUUC-Cfa-020934	Canis familiaris	53.19	0.00e+00	1654.00
IUUC-Cpo-022025	Cavia porcellus	53.60	0.00e+00	1735.00
IUUC-Cre-022928	Chlamydomonas reinhardtii	30.43	3.00e-65	244.00
IUUC-Csa-023022	Chlorocebus sabaeus	55.33	0.00e+00	1766.00
IUUC-Cin-025133	Ciona intestinalis	39.05	0.00e+00	775.00
IUUC-Csv-025816	Ciona savignyi	37.03	0.00e+00	1071.00
IUUC-Dre-028823	Danio rerio	51.27	0.00e+00	1734.00
IUUC-Dno-029211	Dasypus novemcinctus	61.21	0.00e+00	784.00
IUUC-Dor-030211	Dipodomys ordii	54.93	0.00e+00	1046.00
IUUC-Ete-032363	Echinops telfairi	48.88	6.00e-111	394.00
IUUC-Eca-034296	Equus caballus	55.18	0.00e+00	1720.00
IUUC-Eeu-035226	Erinaceus europaeus	46.01	0.00e+00	667.00
IUUC-Fca-035384	Felis catus	54.84	0.00e+00	1776.00
IUUC-Gga-040666	Gallus gallus	81.06	0.00e+00	1817.00
IUUC-Gac-041358	Gasterosteus aculeatus	51.37	0.00e+00	1675.00
IUUC-Ggo-045121	Gorilla gorilla	54.11	0.00e+00	1051.00
IUUC-Hsa-046289	Homo sapiens	54.90	0.00e+00	1011.00
IUUC-Itr-048485	Ictidomys tridecemlineatus	54.28	0.00e+00	954.00
IUUC-Lch-050009	Latimeria chalumnae	56.57	0.00e+00	1923.00
IUUC-Loc-052629	Lepisosteus oculatus	53.30	0.00e+00	1009.00
IUUC-Mcc-055834	Macaca mulatta	51.85	0.00e+00	963.00
IUUC-Meu-056162	Macropus eugenii	59.50	0.00e+00	707.00
IUUC-Mga-060167	Meleagris gallopavo	73.01	0.00e+00	2296.00
IUUC-Mmr-060761	Microcebus murinus	63.60	2.00e-92	331.00
IUUC-Mdo-061886	Monodelphis domestica	59.58	0.00e+00	2120.00
IUUC-Mmu-063652	Mus musculus	55.34	0.00e+00	1819.00
IUUC-Mlu-068141	Myotis lucifugus	55.41	0.00e+00	1802.00
IUUC-Nle-069133	Nomascus leucogenys	53.68	0.00e+00	992.00
IUUC-Ont-072496	Oreochromis niloticus	52.81	0.00e+00	1826.00
IUUC-Oan-072833	Ornithorhynchus anatinus	54.73	0.00e+00	953.00
IUUC-Ocu-074209	Oryctolagus cuniculus	21.50	3.00e-25	110.00
IUUC-Ola-086564	Oryzias latipes	53.28	0.00e+00	1012.00
IUUC-Oga-088919	Otolemur garnettii	51.81	0.00e+00	987.00
IUUC-Oar-089946	Ovis aries	62.56	0.00e+00	728.00
IUUC-Ptr-090755	Pan troglodytes	57.78	0.00e+00	758.00
IUUC-Pan-092054	Papio anubis	54.99	0.00e+00	1758.00
IUUC-Psi-093467	Pelodiscus sinensis	69.41	0.00e+00	2374.00
IUUC-Pma-094573	Petromyzon marinus	43.45	0.00e+00	1440.00
IUUC-Ppa-095984	Physcomitrella patens	22.52	6.00e-17	82.40
IUUC-Pfo-096849	Poecilia formosa	49.26	0.00e+00	1558.00
IUUC-Pab-098320	Pongo abelii	53.81	0.00e+00	1019.00
IUUC-Pca-100172	Procavia capensis	51.71	0.00e+00	999.00
IUUC-Pva-102772	Pteropus vampyrus	55.47	0.00e+00	1019.00
IUUC-Rno-105046	Rattus norvegicus	55.26	0.00e+00	1845.00
IUUC-Sha-107094	Sarcophilus harrisii	61.03	0.00e+00	2190.00
IUUC-Smo-109208	Selaginella moellendorffii	23.08	7.00e-23	102.00
IUUC-Ssc-116257	Sus scrofa	53.86	0.00e+00	1678.00
IUUC-Tgu-117323	Taeniopygia guttata	81.09	0.00e+00	2219.00
IUUC-Tru-118717	Takifugu rubripes	49.28	0.00e+00	1617.00
IUUC-Tni-120108	Tetraodon nigroviridis	49.68	0.00e+00	998.00
IUUC-Ttr-128378	Tursiops truncatus	60.93	0.00e+00	731.00
IUUC-Xtr-131760	Xenopus tropicalis	54.82	0.00e+00	1807.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence