iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099342

Ensembl Protein ID

POPTR_0008s20540.1

UniProt Accession

B9HMB9; B9HMB9_POPTR

Genbank Protein ID

EEE89192.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_721032; POPTR_0008s20540g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s20540	POPTR_0008s20540.1	POPTR_0008s20540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-08	35.5	440	464

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf....sdtllvsGsdDgtikvWD 29
           +++    + ++l++G++Dgt+ +W 
   Q: 440  VEWstsyPHDYLLAGCHDGTVALWK 464
           78888766699*************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEEQEELLGG NGVGIRVSTF DYSVENHFKE MDMISKLCGE AQTDSVDEIE IQCYKSSITF 60
LRSWKLYKYD PRIIRFASET DNSLEKCVLS GINLPLFSSA TVPKVLKDFV MHVGGSVWAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGACAGCAAC GTTTTCGAGG CTTATATTTC TCAGCGATAG TCTGTCCCTA CAATACTTAC 60
AAACATAAAC CTGACTATAA CGACGAAGAG AAGGTGTTGA AGCTCCGGCT AAACGATCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017956--AT_hook_DNA-bd_motif
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PRINTS

PR00929--ATHOOK

SMART

SM00320--WD40

Gene Ontology

GO:0003677--F:DNA binding

KEGG

pop:POPTR_0008s20540g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000091	Aegilops tauschii	48.21	2.00e-125	443.00
IUUC-Aml-001488	Ailuropoda melanoleuca	20.14	8.00e-11	62.40
IUUC-Apl-003185	Anas platyrhynchos	30.29	6.00e-17	82.00
IUUC-Aca-005245	Anolis carolinensis	28.91	5.00e-13	69.70
IUUC-Ath-006785	Arabidopsis thaliana	49.03	0.00e+00	709.00
IUUC-Ame-010654	Astyanax mexicanus	28.80	9.00e-13	68.90
IUUC-Bta-012551	Bos taurus	21.97	9.00e-12	65.50
IUUC-Bdi-014228	Brachypodium distachyon	44.29	1.00e-125	443.00
IUUC-Bol-015619	Brassica oleracea	49.88	0.00e+00	739.00
IUUC-Bra-017820	Brassica rapa	51.34	0.00e+00	736.00
IUUC-Cja-019727	Callithrix jacchus	21.28	3.00e-10	60.50
IUUC-Cfa-020469	Canis familiaris	21.05	1.00e-10	62.00
IUUC-Cpo-021854	Cavia porcellus	21.28	3.00e-11	63.50
IUUC-Csa-023726	Chlorocebus sabaeus	21.28	1.00e-10	61.60
IUUC-Cho-024296	Choloepus hoffmanni	20.78	2.00e-11	63.90
IUUC-Dre-028735	Danio rerio	27.93	2.00e-16	80.90
IUUC-Dno-028895	Dasypus novemcinctus	20.37	3.00e-11	63.90
IUUC-Dor-030617	Dipodomys ordii	22.81	1.00e-14	75.10
IUUC-Eca-033420	Equus caballus	25.48	6.00e-09	55.80
IUUC-Eeu-035060	Erinaceus europaeus	21.31	9.00e-05	42.40
IUUC-Fca-035603	Felis catus	20.59	4.00e-11	63.20
IUUC-Fal-037637	Ficedula albicollis	28.43	5.00e-15	75.90
IUUC-Gga-040991	Gallus gallus	29.67	5.00e-17	83.20
IUUC-Ggo-045595	Gorilla gorilla	21.28	1.00e-10	61.60
IUUC-Hsa-046196	Homo sapiens	21.28	1.00e-10	61.60
IUUC-Hvu-047758	Hordeum vulgare	47.27	1.00e-123	437.00
IUUC-Itr-048222	Ictidomys tridecemlineatus	20.95	9.00e-11	62.40
IUUC-Lch-050384	Latimeria chalumnae	29.74	1.00e-12	67.80
IUUC-Lpe-050995	Leersia perrieri	41.92	5.00e-100	358.00
IUUC-Loc-052778	Lepisosteus oculatus	28.29	4.00e-15	76.60
IUUC-Laf-054474	Loxodonta africana	24.84	1.00e-08	55.10
IUUC-Mcc-055795	Macaca mulatta	21.28	1.00e-10	61.60
IUUC-Mga-059757	Meleagris gallopavo	31.63	2.00e-08	51.60
IUUC-Mmr-061702	Microcebus murinus	25.48	7.00e-09	55.80
IUUC-Mdo-063012	Monodelphis domestica	25.65	7.00e-10	59.30
IUUC-Mmu-063858	Mus musculus	20.37	3.00e-10	60.50
IUUC-Mpu-066147	Mustela putorius furo	30.77	1.00e-05	45.10
IUUC-Mlu-067530	Myotis lucifugus	20.82	3.00e-10	60.50
IUUC-Nle-069278	Nomascus leucogenys	21.28	2.00e-10	61.20
IUUC-Opr-070222	Ochotona princeps	20.14	7.00e-11	62.40
IUUC-Ont-071367	Oreochromis niloticus	29.95	2.00e-13	70.90
IUUC-Oan-073357	Ornithorhynchus anatinus	30.61	1.00e-08	53.90
IUUC-Ocu-074887	Oryctolagus cuniculus	23.57	6.00e-08	52.80
IUUC-Obr-076376	Oryza brachyantha	42.28	2.00e-98	353.00
IUUC-Ogl-077258	Oryza glaberrima	41.47	2.00e-122	433.00
IUUC-Ogu-078002	Oryza glumaepatula	43.88	3.00e-90	325.00
IUUC-Oin-079689	Oryza indica	41.31	1.00e-121	431.00
IUUC-Olo-080486	Oryza longistaminata	33.20	2.00e-62	233.00
IUUC-Oni-082369	Oryza nivara	40.87	1.00e-118	421.00
IUUC-Opu-083230	Oryza punctata	46.69	2.00e-121	429.00
IUUC-Osa-085403	Oryza sativa	44.54	2.00e-107	382.00
IUUC-Ola-087512	Oryzias latipes	33.04	2.00e-08	53.10
IUUC-Oga-088051	Otolemur garnettii	20.91	3.00e-11	63.90
IUUC-Oar-090076	Ovis aries	21.97	7.00e-12	65.90
IUUC-Ptr-091503	Pan troglodytes	24.84	1.00e-08	54.70
IUUC-Pan-092123	Papio anubis	21.28	1.00e-10	61.60
IUUC-Psi-094020	Pelodiscus sinensis	28.64	2.00e-15	77.40
IUUC-Ppa-095644	Physcomitrella patens	36.93	6.00e-74	270.00
IUUC-Pfo-097023	Poecilia formosa	25.74	1.00e-08	55.50
IUUC-Pab-097532	Pongo abelii	20.59	2.00e-10	60.80
IUUC-Pca-100255	Procavia capensis	27.35	6.00e-08	52.80
IUUC-Ppe-101268	Prunus persica	51.55	0.00e+00	739.00
IUUC-Pva-102403	Pteropus vampyrus	21.28	5.00e-11	63.20
IUUC-Rno-105329	Rattus norvegicus	20.37	3.00e-10	60.50
IUUC-Sha-106857	Sarcophilus harrisii	25.13	1.00e-08	54.70
IUUC-Sit-110532	Setaria italica	55.40	2.00e-90	327.00
IUUC-Sly-110922	Solanum lycopersicum	43.71	0.00e+00	649.00
IUUC-Sar-113690	Sorex araneus	30.77	4.00e-06	46.20
IUUC-Sbi-114680	Sorghum bicolor	42.68	4.00e-120	425.00
IUUC-Tgu-117058	Taeniopygia guttata	30.77	2.00e-09	55.80
IUUC-Tru-118675	Takifugu rubripes	28.85	1.00e-13	70.90
IUUC-Tsy-119606	Tarsius syrichta	25.00	5.00e-05	43.10
IUUC-Tae-125532	Triticum aestivum	48.21	9.00e-128	451.00
IUUC-Tur-126862	Triticum urartu	48.21	2.00e-127	449.00
IUUC-Tbe-127727	Tupaia belangeri	27.13	4.00e-08	53.10
IUUC-Ttr-128425	Tursiops truncatus	25.48	3.00e-09	56.60
IUUC-Vpa-130050	Vicugna pacos	20.14	2.00e-10	61.20
IUUC-Vvi-131706	Vitis vinifera	54.11	3.00e-172	598.00
IUUC-Xtr-132178	Xenopus tropicalis	27.72	4.00e-13	70.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence