iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107862

Ensembl Protein ID

EEB07667

UniProt Accession

B6K146; B6K146_SCHJY

Genbank Protein ID

EEB07667.1

Protein Name

Set1C complex subunit Swd1

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_02768

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_02768	EEB07667	EEB07667

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-10	36.6	64	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt  + ++++ s+ ++l+++s+D ++ +WDl++ + 
   Q: 64   GHTRAIQSVRWsSCgRYLLTASRDWKCILWDLKDATI 100
           8**********9778*********99*****998766 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MNLGLIDPFS ISDYPESLGN VLKKGHATSI RFNEKGSALA AGLVNGTVFV WNLVTLSVIR 60
KLKGHTRAIQ SVRWSSCGRY LLTASRDWKC ILWDLKDATI VYSIRFQGPL WQAELHPSDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGATAATCC AGCGATAGTC AATGAATATA AATTATAAGT GTGGACGAGA TTAGCAACAA 60
TAAATGGTTT TTCATAGCTG GAGAATGCAA CTGTTGCATC AACAAGTGTT TGAACCAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000781--C:chromosome, telomeric region
GO:0005829--C:cytosol
GO:0048188--C:Set1C/COMPASS complex
GO:0042800--F:histone methyltransferase activity (H3-K4 specific)
GO:0006348--P:chromatin silencing at telomere
GO:0000723--P:telomere maintenance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	32.47	9.00e-45	172.00
IUUC-Aml-002118	Ailuropoda melanoleuca	33.14	8.00e-48	182.00
IUUC-Atr-002777	Amborella trichopoda	31.28	1.00e-36	145.00
IUUC-Apl-004056	Anas platyrhynchos	33.14	6.00e-48	182.00
IUUC-Aca-004999	Anolis carolinensis	33.14	7.00e-48	182.00
IUUC-Aly-006092	Arabidopsis lyrata	33.25	8.00e-45	172.00
IUUC-Ath-006947	Arabidopsis thaliana	33.25	2.00e-44	171.00
IUUC-Ago-007753	Ashbya gossypii	36.05	2.00e-65	241.00
IUUC-Acl-008105	Aspergillus clavatus	43.61	8.00e-90	322.00
IUUC-Afl-008633	Aspergillus flavus	45.98	9.00e-91	325.00
IUUC-Afu-009075	Aspergillus fumigatus	40.92	2.00e-55	207.00
IUUC-Ani-009233	Aspergillus nidulans	44.52	2.00e-100	357.00
IUUC-Ang-009695	Aspergillus niger	46.23	5.00e-93	332.00
IUUC-Aor-009988	Aspergillus oryzae	45.98	9.00e-91	325.00
IUUC-Ate-010313	Aspergillus terreus	44.65	5.00e-93	332.00
IUUC-Ame-011134	Astyanax mexicanus	30.23	3.00e-39	154.00
IUUC-Bgr-012302	Blumeria graminis	47.11	1.00e-93	335.00
IUUC-Bta-012946	Bos taurus	33.42	2.00e-49	188.00
IUUC-Bci-013968	Botrytis cinerea	45.77	2.00e-90	323.00
IUUC-Bdi-014387	Brachypodium distachyon	31.99	2.00e-46	178.00
IUUC-Bra-017414	Brassica rapa	32.34	5.00e-45	173.00
IUUC-Cel-018610	Caenorhabditis elegans	33.71	3.00e-48	184.00
IUUC-Cja-019938	Callithrix jacchus	33.14	1.00e-47	182.00
IUUC-Cfa-020726	Canis familiaris	33.15	4.00e-49	187.00
IUUC-Cpo-021560	Cavia porcellus	31.01	8.00e-40	155.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	47.32	5.00e-27	113.00
IUUC-Csa-024192	Chlorocebus sabaeus	33.42	2.00e-49	188.00
IUUC-Cho-024355	Choloepus hoffmanni	33.42	1.00e-49	188.00
IUUC-Cin-025285	Ciona intestinalis	31.32	2.00e-49	187.00
IUUC-Csv-026366	Ciona savignyi	31.61	5.00e-49	186.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	43.65	2.00e-86	310.00
IUUC-Cne-027092	Cryptococcus neoformans	33.15	4.00e-51	193.00
IUUC-Cme-027137	Cyanidioschyzon merolae	34.18	5.00e-21	94.00
IUUC-Dre-027374	Danio rerio	33.70	7.00e-51	192.00
IUUC-Dno-030003	Dasypus novemcinctus	31.44	2.00e-41	161.00
IUUC-Dor-030355	Dipodomys ordii	33.42	2.00e-49	187.00
IUUC-Dse-031442	Dothistroma septosporum	45.38	9.00e-91	325.00
IUUC-Dme-031932	Drosophila melanogaster	35.26	5.00e-59	219.00
IUUC-Ete-032858	Echinops telfairi	34.51	2.00e-38	151.00
IUUC-Eca-034217	Equus caballus	33.42	2.00e-49	188.00
IUUC-Eeu-035024	Erinaceus europaeus	33.42	1.00e-50	192.00
IUUC-Fca-035370	Felis catus	33.14	9.00e-48	182.00
IUUC-Fal-036628	Ficedula albicollis	33.43	6.00e-47	179.00
IUUC-Fox-037739	Fusarium oxysporum	44.68	1.00e-88	318.00
IUUC-Fso-038094	Fusarium solani	43.30	7.00e-85	305.00
IUUC-Gmo-039088	Gadus morhua	32.39	6.00e-47	179.00
IUUC-Ggr-040063	Gaeumannomyces graminis	41.71	7.00e-92	328.00
IUUC-Gga-041160	Gallus gallus	33.42	1.00e-49	188.00
IUUC-Gac-041333	Gasterosteus aculeatus	32.58	4.00e-47	180.00
IUUC-Gma-044101	Glycine max	32.92	3.00e-46	177.00
IUUC-Ggo-044657	Gorilla gorilla	33.42	2.00e-49	188.00
IUUC-Hsa-045894	Homo sapiens	33.42	2.00e-49	188.00
IUUC-Hvu-047662	Hordeum vulgare	32.00	1.00e-45	175.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	33.43	2.00e-47	181.00
IUUC-Kpa-049095	Komagataella pastoris	43.22	6.00e-80	288.00
IUUC-Lch-049495	Latimeria chalumnae	41.76	4.00e-28	117.00
IUUC-Lpe-051038	Leersia perrieri	31.62	3.00e-42	164.00
IUUC-Loc-052680	Lepisosteus oculatus	33.70	1.00e-50	191.00
IUUC-Laf-053717	Loxodonta africana	33.14	1.00e-47	182.00
IUUC-Mcc-055007	Macaca mulatta	33.43	2.00e-47	181.00
IUUC-Meu-056494	Macropus eugenii	50.54	2.00e-16	78.60
IUUC-Mor-057173	Magnaporthe oryzae	44.54	5.00e-92	329.00
IUUC-Mpo-057622	Magnaporthe poae	41.71	2.00e-92	330.00
IUUC-Mtr-057672	Medicago truncatula	32.12	1.00e-44	171.00
IUUC-Mla-059057	Melampsora laricipopulina	32.13	9.00e-44	169.00
IUUC-Mga-060037	Meleagris gallopavo	32.68	9.00e-47	179.00
IUUC-Mvi-060321	Microbotryum violaceum	33.59	1.00e-53	202.00
IUUC-Mmr-060755	Microcebus murinus	32.41	6.00e-48	182.00
IUUC-Mdo-061859	Monodelphis domestica	33.70	9.00e-50	189.00
IUUC-Mmu-063755	Mus musculus	33.42	2.00e-49	188.00
IUUC-Mac-065292	Musa acuminata	33.58	2.00e-48	185.00
IUUC-Mpu-065896	Mustela putorius furo	33.42	2.00e-49	188.00
IUUC-Mlu-067927	Myotis lucifugus	33.14	8.00e-48	182.00
IUUC-Nfi-068429	Neosartorya fischeri	45.52	2.00e-91	327.00
IUUC-Ncr-068738	Neurospora crassa	44.44	9.00e-92	328.00
IUUC-Nle-069608	Nomascus leucogenys	33.42	2.00e-49	188.00
IUUC-Opr-070319	Ochotona princeps	32.77	1.00e-46	178.00
IUUC-Ont-071451	Oreochromis niloticus	33.42	2.00e-49	188.00
IUUC-Oan-073445	Ornithorhynchus anatinus	33.15	2.00e-47	181.00
IUUC-Ocu-074341	Oryctolagus cuniculus	33.42	2.00e-49	187.00
IUUC-Oba-075664	Oryza barthii	31.07	3.00e-45	174.00
IUUC-Obr-076630	Oryza brachyantha	31.62	3.00e-45	174.00
IUUC-Ogl-077847	Oryza glaberrima	31.07	3.00e-45	174.00
IUUC-Ogu-077970	Oryza glumaepatula	31.07	1.00e-39	155.00
IUUC-Oin-079374	Oryza indica	30.81	9.00e-45	172.00
IUUC-Olo-080992	Oryza longistaminata	31.07	5.00e-45	173.00
IUUC-Ome-081683	Oryza meridionalis	31.07	6.00e-45	173.00
IUUC-Oni-082594	Oryza nivara	30.81	9.00e-45	172.00
IUUC-Opu-083907	Oryza punctata	31.07	4.00e-45	173.00
IUUC-Oru-084400	Oryza rufipogon	31.07	3.00e-45	174.00
IUUC-Osa-085442	Oryza sativa	31.07	3.00e-45	174.00
IUUC-Ola-086569	Oryzias latipes	33.42	9.00e-50	189.00
IUUC-Oga-088947	Otolemur garnettii	31.73	4.00e-42	164.00
IUUC-Oar-090358	Ovis aries	33.43	4.00e-48	183.00
IUUC-Ptr-091601	Pan troglodytes	33.42	2.00e-49	187.00
IUUC-Pan-092466	Papio anubis	33.42	2.00e-49	188.00
IUUC-Psi-093614	Pelodiscus sinensis	33.14	8.00e-48	182.00
IUUC-Pma-094450	Petromyzon marinus	33.89	5.00e-49	186.00
IUUC-Pno-094819	Phaeosphaeria nodorum	40.99	1.00e-84	305.00
IUUC-Ppa-095157	Physcomitrella patens	31.73	3.00e-20	90.10
IUUC-Pfo-096312	Poecilia formosa	33.42	8.00e-50	189.00
IUUC-Pab-098058	Pongo abelii	33.42	2.00e-49	188.00
IUUC-Pop-099447	Populus trichocarpa	32.93	5.00e-47	180.00
IUUC-Pca-100623	Procavia capensis	33.42	2.00e-49	187.00
IUUC-Ppe-102053	Prunus persica	35.06	2.00e-47	181.00
IUUC-Pva-102779	Pteropus vampyrus	32.31	3.00e-45	174.00
IUUC-Pgr-103398	Puccinia graminis	33.25	1.00e-47	182.00
IUUC-Ptt-103912	Puccinia triticina	33.51	1.00e-47	181.00
IUUC-Pte-104246	Pyrenophora teres	45.06	1.00e-90	325.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	45.06	2.00e-90	324.00
IUUC-Rno-104838	Rattus norvegicus	33.42	2.00e-49	187.00
IUUC-Sce-106229	Saccharomyces cerevisiae	37.60	1.00e-64	238.00
IUUC-Sha-106527	Sarcophilus harrisii	33.70	9.00e-50	189.00
IUUC-Spo-108025	Schizosaccharomyces pombe	61.44	3.00e-140	489.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	46.30	3.00e-91	326.00
IUUC-Smo-109474	Selaginella moellendorffii	31.87	3.00e-37	147.00
IUUC-Sit-110687	Setaria italica	30.08	4.00e-40	157.00
IUUC-Sly-111597	Solanum lycopersicum	33.08	2.00e-43	168.00
IUUC-Stu-112389	Solanum tuberosum	33.33	5.00e-44	170.00
IUUC-Sar-113284	Sorex araneus	29.04	2.00e-35	141.00
IUUC-Sbi-114362	Sorghum bicolor	30.37	2.00e-43	167.00
IUUC-Sre-115146	Sporisorium reilianum	31.58	5.00e-54	203.00
IUUC-Ssc-115604	Sus scrofa	33.14	8.00e-48	182.00
IUUC-Tru-118258	Takifugu rubripes	33.42	3.00e-49	187.00
IUUC-Tsy-119169	Tarsius syrichta	30.58	5.00e-40	156.00
IUUC-Tni-119939	Tetraodon nigroviridis	33.33	9.00e-49	185.00
IUUC-Tca-121010	Theobroma cacao	35.32	1.00e-50	191.00
IUUC-Tre-121944	Trichoderma reesei	42.86	2.00e-84	303.00
IUUC-Tvi-122283	Trichoderma virens	43.64	3.00e-85	306.00
IUUC-Tur-126395	Triticum urartu	30.59	2.00e-44	171.00
IUUC-Tme-127150	Tuber melanosporum	46.07	2.00e-98	350.00
IUUC-Tbe-127745	Tupaia belangeri	25.08	9.00e-22	96.30
IUUC-Ttr-129187	Tursiops truncatus	33.42	2.00e-49	188.00
IUUC-Uma-129654	Ustilago maydis	30.44	1.00e-50	191.00
IUUC-Vda-129788	Verticillium dahliae	42.39	9.00e-93	332.00
IUUC-Vpa-130182	Vicugna pacos	34.71	2.00e-38	151.00
IUUC-Vvi-131557	Vitis vinifera	32.30	6.00e-48	183.00
IUUC-Xtr-132007	Xenopus tropicalis	33.70	3.00e-50	190.00
IUUC-Xma-133909	Xiphophorus maculatus	33.70	1.00e-49	188.00
IUUC-Yli-134524	Yarrowia lipolytica	47.47	4.00e-95	339.00
IUUC-Zma-134821	Zea mays	30.10	5.00e-43	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence