iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126395

Ensembl Protein ID

TRIUR3_13010-P1

UniProt Accession

M7ZET0; M7ZET0_TRIUA

Genbank Protein ID

EMS61733.1

Protein Name

Retinoblastoma-binding protein 5

Genbank Nucleotide ID

KD091477

Gene Name

TRIUR3_13010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_13010	TRIUR3_13010-T1	TRIUR3_13010-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-13	49.0	68	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDlrt 32
           + c+af   +tll++G+ +g++ +WD+ t
   Q: 68   MKCIAFnrRGTLLAAGCANGSCVIWDFET 96
           78****9766****************876 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MDGETHFSSV MGKPGGFLFD ARASAAASSH KRASPAALSC KRASSAASDP LQGDFPETIE 60
EFLQHGNMKC IAFNRRGTLL AAGCANGSCV IWDFETRGLA REFRDKDCTA PITSVSWSKY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGGCG AGACACACTT TTCTTCTGTC ATGGGTAAGC CGGGAGGCTT CCTCTTCGAC 60
GCAAGGGCTT CGGCGGCCGC TTCGTCCCAT AAGAGGGCTT CGCCGGCCGC TTTGTCCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0010228--P:vegetative to reproductive phase transition of meristem

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	95.49	0.00e+00	1139.00
IUUC-Aml-002118	Ailuropoda melanoleuca	32.47	2.00e-59	222.00
IUUC-Atr-002777	Amborella trichopoda	61.03	2.00e-172	597.00
IUUC-Apl-004056	Anas platyrhynchos	34.17	9.00e-59	220.00
IUUC-Aca-004999	Anolis carolinensis	36.40	8.00e-59	220.00
IUUC-Aly-006092	Arabidopsis lyrata	57.44	1.00e-159	555.00
IUUC-Ath-006947	Arabidopsis thaliana	59.23	1.00e-157	548.00
IUUC-Ago-007753	Ashbya gossypii	27.78	9.00e-27	113.00
IUUC-Acl-008105	Aspergillus clavatus	31.46	2.00e-42	166.00
IUUC-Afl-008633	Aspergillus flavus	31.18	2.00e-41	162.00
IUUC-Afu-009075	Aspergillus fumigatus	31.85	1.00e-20	93.20
IUUC-Ani-009233	Aspergillus nidulans	31.94	3.00e-43	168.00
IUUC-Ang-009695	Aspergillus niger	32.05	4.00e-43	167.00
IUUC-Aor-009988	Aspergillus oryzae	31.18	2.00e-41	162.00
IUUC-Ate-010313	Aspergillus terreus	31.40	2.00e-41	162.00
IUUC-Ame-011134	Astyanax mexicanus	30.27	2.00e-41	163.00
IUUC-Bgr-012302	Blumeria graminis	31.78	4.00e-39	154.00
IUUC-Bta-012946	Bos taurus	32.18	4.00e-60	224.00
IUUC-Bci-013968	Botrytis cinerea	30.90	2.00e-41	162.00
IUUC-Bdi-014387	Brachypodium distachyon	87.29	0.00e+00	845.00
IUUC-Bra-017414	Brassica rapa	57.35	9.00e-159	552.00
IUUC-Cel-018610	Caenorhabditis elegans	30.83	2.00e-48	185.00
IUUC-Cja-019938	Callithrix jacchus	32.32	1.00e-59	223.00
IUUC-Cfa-020726	Canis familiaris	32.67	6.00e-60	224.00
IUUC-Cpo-021560	Cavia porcellus	34.51	2.00e-49	188.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	53.57	5.00e-25	107.00
IUUC-Csa-024192	Chlorocebus sabaeus	32.18	4.00e-60	224.00
IUUC-Cho-024355	Choloepus hoffmanni	36.00	4.00e-59	221.00
IUUC-Cin-025285	Ciona intestinalis	35.03	3.00e-60	225.00
IUUC-Csv-026366	Ciona savignyi	32.89	4.00e-57	214.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	27.77	2.00e-39	155.00
IUUC-Cne-027092	Cryptococcus neoformans	27.32	4.00e-40	157.00
IUUC-Cme-027137	Cyanidioschyzon merolae	29.54	3.00e-20	92.40
IUUC-Dre-027374	Danio rerio	35.95	2.00e-59	222.00
IUUC-Dno-030003	Dasypus novemcinctus	32.99	6.00e-56	211.00
IUUC-Dor-030355	Dipodomys ordii	34.15	7.00e-60	224.00
IUUC-Dse-031442	Dothistroma septosporum	32.03	2.00e-43	169.00
IUUC-Dme-031932	Drosophila melanogaster	36.96	6.00e-65	240.00
IUUC-Ete-032858	Echinops telfairi	34.54	1.00e-40	159.00
IUUC-Eca-034217	Equus caballus	32.18	9.00e-60	223.00
IUUC-Eeu-035024	Erinaceus europaeus	36.29	2.00e-57	216.00
IUUC-Fca-035370	Felis catus	32.71	5.00e-60	224.00
IUUC-Fal-036628	Ficedula albicollis	36.83	1.00e-57	216.00
IUUC-Fox-037739	Fusarium oxysporum	28.67	1.00e-41	162.00
IUUC-Fso-038094	Fusarium solani	29.50	9.00e-41	160.00
IUUC-Gmo-039088	Gadus morhua	33.89	1.00e-58	219.00
IUUC-Ggr-040063	Gaeumannomyces graminis	28.37	5.00e-40	157.00
IUUC-Gga-041160	Gallus gallus	36.50	1.00e-58	219.00
IUUC-Gac-041333	Gasterosteus aculeatus	33.83	1.00e-58	219.00
IUUC-Gma-043909	Glycine max	62.55	1.00e-171	595.00
IUUC-Ggo-044657	Gorilla gorilla	32.18	4.00e-60	224.00
IUUC-Hsa-045894	Homo sapiens	32.18	4.00e-60	224.00
IUUC-Hvu-047662	Hordeum vulgare	96.48	0.00e+00	1040.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	32.23	1.00e-58	219.00
IUUC-Kpa-049095	Komagataella pastoris	25.81	1.00e-28	119.00
IUUC-Lch-049495	Latimeria chalumnae	29.81	7.00e-25	107.00
IUUC-Lpe-051038	Leersia perrieri	75.38	0.00e+00	790.00
IUUC-Loc-052680	Lepisosteus oculatus	32.84	5.00e-61	227.00
IUUC-Laf-053717	Loxodonta africana	32.54	1.00e-59	223.00
IUUC-Mcc-055007	Macaca mulatta	32.87	2.00e-59	222.00
IUUC-Meu-056494	Macropus eugenii	39.06	5.00e-16	78.20
IUUC-Mor-057173	Magnaporthe oryzae	29.64	1.00e-39	156.00
IUUC-Mpo-057622	Magnaporthe poae	27.44	1.00e-40	159.00
IUUC-Mtr-057672	Medicago truncatula	61.19	3.00e-175	607.00
IUUC-Mla-059057	Melampsora laricipopulina	29.29	1.00e-33	136.00
IUUC-Mga-060037	Meleagris gallopavo	33.68	4.00e-57	214.00
IUUC-Mvi-060321	Microbotryum violaceum	31.83	3.00e-41	162.00
IUUC-Mmr-060755	Microcebus murinus	32.71	6.00e-60	224.00
IUUC-Mdo-061859	Monodelphis domestica	34.72	8.00e-59	220.00
IUUC-Mmu-063755	Mus musculus	33.45	3.00e-59	221.00
IUUC-Mac-065292	Musa acuminata	72.06	0.00e+00	751.00
IUUC-Mpu-065896	Mustela putorius furo	33.97	1.00e-59	223.00
IUUC-Mlu-067927	Myotis lucifugus	32.32	2.00e-59	222.00
IUUC-Nfi-068429	Neosartorya fischeri	30.79	3.00e-41	162.00
IUUC-Ncr-068738	Neurospora crassa	31.22	7.00e-44	170.00
IUUC-Nle-069608	Nomascus leucogenys	32.18	4.00e-60	224.00
IUUC-Opr-070319	Ochotona princeps	31.81	1.00e-57	216.00
IUUC-Ont-071451	Oreochromis niloticus	34.18	4.00e-61	228.00
IUUC-Oan-073445	Ornithorhynchus anatinus	35.97	4.00e-57	214.00
IUUC-Ocu-074341	Oryctolagus cuniculus	32.18	1.00e-59	223.00
IUUC-Oba-075664	Oryza barthii	76.49	0.00e+00	844.00
IUUC-Obr-076630	Oryza brachyantha	76.75	0.00e+00	805.00
IUUC-Ogl-077847	Oryza glaberrima	76.36	0.00e+00	845.00
IUUC-Ogu-077970	Oryza glumaepatula	75.35	0.00e+00	800.00
IUUC-Oin-079374	Oryza indica	76.32	0.00e+00	842.00
IUUC-Olo-080992	Oryza longistaminata	76.49	0.00e+00	842.00
IUUC-Ome-081683	Oryza meridionalis	75.90	0.00e+00	792.00
IUUC-Oni-082594	Oryza nivara	76.32	0.00e+00	842.00
IUUC-Opu-083907	Oryza punctata	76.58	0.00e+00	856.00
IUUC-Oru-084400	Oryza rufipogon	76.32	0.00e+00	842.00
IUUC-Osa-085442	Oryza sativa	76.32	0.00e+00	842.00
IUUC-Ola-086569	Oryzias latipes	36.58	7.00e-59	220.00
IUUC-Oga-088947	Otolemur garnettii	31.44	2.00e-55	209.00
IUUC-Oar-090358	Ovis aries	32.54	1.00e-59	223.00
IUUC-Ptr-091601	Pan troglodytes	32.61	2.00e-59	222.00
IUUC-Pan-092466	Papio anubis	32.18	4.00e-60	224.00
IUUC-Psi-093614	Pelodiscus sinensis	31.58	8.00e-59	220.00
IUUC-Pma-094450	Petromyzon marinus	34.96	4.00e-57	214.00
IUUC-Pno-094819	Phaeosphaeria nodorum	28.92	3.00e-37	148.00
IUUC-Ppa-095157	Physcomitrella patens	60.39	2.00e-67	248.00
IUUC-Pfo-096312	Poecilia formosa	33.87	2.00e-60	225.00
IUUC-Pab-098058	Pongo abelii	32.18	4.00e-60	224.00
IUUC-Pop-099447	Populus trichocarpa	64.62	0.00e+00	639.00
IUUC-Pca-100623	Procavia capensis	36.29	2.00e-57	216.00
IUUC-Ppe-102053	Prunus persica	64.16	0.00e+00	634.00
IUUC-Pva-102779	Pteropus vampyrus	30.58	3.00e-56	211.00
IUUC-Pgr-103398	Puccinia graminis	30.23	2.00e-37	149.00
IUUC-Ptt-103912	Puccinia triticina	30.23	7.00e-38	150.00
IUUC-Pte-104246	Pyrenophora teres	29.68	2.00e-38	152.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	31.10	2.00e-38	152.00
IUUC-Rno-104838	Rattus norvegicus	31.95	4.00e-59	221.00
IUUC-Sce-106229	Saccharomyces cerevisiae	28.65	2.00e-27	115.00
IUUC-Sha-106527	Sarcophilus harrisii	34.72	8.00e-59	220.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	32.49	5.00e-44	171.00
IUUC-Spo-108025	Schizosaccharomyces pombe	33.00	1.00e-41	162.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	30.90	3.00e-41	161.00
IUUC-Smo-109474	Selaginella moellendorffii	48.58	1.00e-115	409.00
IUUC-Sit-110687	Setaria italica	75.50	0.00e+00	789.00
IUUC-Sly-111597	Solanum lycopersicum	61.80	4.00e-173	600.00
IUUC-Stu-112389	Solanum tuberosum	62.13	6.00e-178	615.00
IUUC-Sar-113284	Sorex araneus	37.07	1.00e-36	147.00
IUUC-Sbi-114362	Sorghum bicolor	73.41	0.00e+00	750.00
IUUC-Sre-115146	Sporisorium reilianum	26.00	2.00e-30	126.00
IUUC-Ssc-115604	Sus scrofa	32.71	6.00e-60	224.00
IUUC-Tru-118258	Takifugu rubripes	33.82	2.00e-60	225.00
IUUC-Tsy-119169	Tarsius syrichta	34.51	2.00e-49	189.00
IUUC-Tni-119939	Tetraodon nigroviridis	36.50	1.00e-57	216.00
IUUC-Tca-121010	Theobroma cacao	63.45	0.00e+00	659.00
IUUC-Tre-121944	Trichoderma reesei	29.63	5.00e-40	157.00
IUUC-Tvi-122283	Trichoderma virens	29.86	3.00e-41	161.00
IUUC-Tme-127150	Tuber melanosporum	29.93	1.00e-42	166.00
IUUC-Tbe-127745	Tupaia belangeri	33.64	8.00e-29	120.00
IUUC-Ttr-129187	Tursiops truncatus	32.38	1.00e-57	216.00
IUUC-Uma-129654	Ustilago maydis	33.98	5.00e-24	105.00
IUUC-Vda-129788	Verticillium dahliae	29.06	3.00e-41	161.00
IUUC-Vpa-130182	Vicugna pacos	35.28	5.00e-46	177.00
IUUC-Vvi-131557	Vitis vinifera	64.64	0.00e+00	656.00
IUUC-Xtr-132007	Xenopus tropicalis	36.72	2.00e-60	226.00
IUUC-Xma-133909	Xiphophorus maculatus	33.62	3.00e-61	228.00
IUUC-Yli-134524	Yarrowia lipolytica	29.35	6.00e-41	160.00
IUUC-Zma-134821	Zea mays	73.76	0.00e+00	775.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence