iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022523

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02032066

Gene Name

LRWD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000001400.3	ENSCPOT00000001419.2	ENSCPOP00000001265.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-06	27.0	397	427

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+  +  l+f  +  t+l ++s+D+ i +WD
   Q: 397  HKKAIATLCFspTHeTHLFTASYDKRIILWD 427
           88889999***6447**************** PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MSPLTARLLM ERGQPRTDRL GKIRCLDLSG MELLAEHLDP KLLCRLTQLQ ELDLSNNQLE 60
TLPASLGLSH LRILHCANNQ LEDVTTLCQF PKLEELSLEG NPFLTVNDNL KVAFLLPSLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTCCCC TCACGGCGCG GCTGCTTATG GAGCGCGGGC AACCCAGGAC CGACCGTCTG 60
GGGAAGATCA GATGCCTGGA GTAAGGGTCT GGCGGGGACG GGGATGTGTC CGCGGGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR025875--Leu-rich_rpt_4
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51450--LRR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12799--LRR_4

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000776--C:kinetochore
GO:0005664--C:nuclear origin of replication recognition complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005721--C:pericentric heterochromatin
GO:0031933--C:telomeric heterochromatin
GO:0003682--F:chromatin binding
GO:0008327--F:methyl-CpG binding
GO:0006325--P:chromatin organization
GO:0071169--P:establishment of protein localization to chromatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001948	Ailuropoda melanoleuca	80.56	0.00e+00	637.00
IUUC-Bta-012858	Bos taurus	77.30	0.00e+00	972.00
IUUC-Cja-019702	Callithrix jacchus	82.21	0.00e+00	994.00
IUUC-Cfa-020910	Canis familiaris	80.28	0.00e+00	1009.00
IUUC-Csa-023359	Chlorocebus sabaeus	82.98	0.00e+00	1036.00
IUUC-Dno-029426	Dasypus novemcinctus	80.98	0.00e+00	983.00
IUUC-Dor-030654	Dipodomys ordii	78.06	0.00e+00	797.00
IUUC-Eca-034035	Equus caballus	81.13	0.00e+00	1007.00
IUUC-Eeu-034711	Erinaceus europaeus	74.41	1.00e-167	583.00
IUUC-Gmo-039096	Gadus morhua	34.54	2.00e-109	389.00
IUUC-Ggo-044714	Gorilla gorilla	82.21	0.00e+00	1004.00
IUUC-Hsa-046826	Homo sapiens	82.52	0.00e+00	1006.00
IUUC-Laf-054449	Loxodonta africana	80.52	0.00e+00	979.00
IUUC-Mcc-055193	Macaca mulatta	83.28	0.00e+00	1007.00
IUUC-Mmr-061572	Microcebus murinus	82.52	0.00e+00	1049.00
IUUC-Mmu-063240	Mus musculus	74.27	0.00e+00	915.00
IUUC-Mpu-066295	Mustela putorius furo	80.67	0.00e+00	1000.00
IUUC-Mlu-067766	Myotis lucifugus	79.94	0.00e+00	1016.00
IUUC-Nle-069200	Nomascus leucogenys	80.06	0.00e+00	933.00
IUUC-Ola-086965	Oryzias latipes	41.81	8.00e-87	314.00
IUUC-Oga-088411	Otolemur garnettii	76.19	0.00e+00	1004.00
IUUC-Oar-089415	Ovis aries	76.07	0.00e+00	899.00
IUUC-Ptr-090663	Pan troglodytes	82.36	0.00e+00	1005.00
IUUC-Pan-092467	Papio anubis	82.52	0.00e+00	992.00
IUUC-Pab-098479	Pongo abelii	82.36	0.00e+00	1006.00
IUUC-Pca-101023	Procavia capensis	68.71	0.00e+00	801.00
IUUC-Pva-102812	Pteropus vampyrus	77.45	0.00e+00	982.00
IUUC-Rno-105469	Rattus norvegicus	75.50	0.00e+00	953.00
IUUC-Ssc-115884	Sus scrofa	81.29	0.00e+00	1028.00
IUUC-Tbe-127247	Tupaia belangeri	81.69	4.00e-127	448.00
IUUC-Ttr-128723	Tursiops truncatus	80.67	0.00e+00	1000.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence