iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00011242	R11D1.1a	R11D1.1a
WBGene00011242	R11D1.1b	R11D1.1b
WBGene00011242	R11D1.1c	R11D1.1c
WBGene00011242	R11D1.1d	R11D1.1d

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-09	36.6	65	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           Ht+ +++l+f  +d++l+sG+dD   +vW+++
   Q: 65   HTGCINALQFshNDRFLASGGDDMHGRVWNVD 96
           9**********888*********9999***85 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MLVEEEPPPE NEENMDIEIS KSTNNQFKIE SFLCQREIGS VKSVVKTFRP DFQHRPFCQK 60
DVREHTGCIN ALQFSHNDRF LASGGDDMHG RVWNVDELMV RKTPKPIGVM EHPHRSNIFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAAAAATG CTGGTCGAAG AAGAACCACC ACCAGAGAAT GAAGAAAATA TGGATATCGA 60
AATTTCAAAG TCCACAAATA ATCAATTCAA AATCGAATCA TTTCTTTGTC AACGAGAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

cel:CELE_R11D1.1

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001497	Ailuropoda melanoleuca	30.94	1.00e-31	130.00
IUUC-Apl-003432	Anas platyrhynchos	29.19	1.00e-23	103.00
IUUC-Aca-005069	Anolis carolinensis	29.57	7.00e-22	98.20
IUUC-Ame-011063	Astyanax mexicanus	28.96	1.00e-30	127.00
IUUC-Bta-013013	Bos taurus	29.50	3.00e-24	106.00
IUUC-Cja-018816	Callithrix jacchus	30.94	4.00e-31	128.00
IUUC-Cfa-020397	Canis familiaris	30.94	3.00e-31	129.00
IUUC-Cpo-021999	Cavia porcellus	29.50	2.00e-24	106.00
IUUC-Csa-024256	Chlorocebus sabaeus	30.94	3.00e-31	129.00
IUUC-Cho-024707	Choloepus hoffmanni	28.44	3.00e-23	102.00
IUUC-Cin-025728	Ciona intestinalis	33.15	3.00e-18	84.00
IUUC-Dre-027683	Danio rerio	29.48	5.00e-30	124.00
IUUC-Dno-029603	Dasypus novemcinctus	30.94	2.00e-31	129.00
IUUC-Dme-031660	Drosophila melanogaster	31.29	4.00e-31	128.00
IUUC-Ete-032701	Echinops telfairi	30.22	6.00e-24	105.00
IUUC-Eca-033345	Equus caballus	29.45	5.00e-22	98.60
IUUC-Fca-036007	Felis catus	30.94	3.00e-31	129.00
IUUC-Fal-036759	Ficedula albicollis	29.41	4.00e-24	105.00
IUUC-Gmo-039095	Gadus morhua	28.37	2.00e-29	122.00
IUUC-Gga-040850	Gallus gallus	31.02	7.00e-17	79.70
IUUC-Gac-041422	Gasterosteus aculeatus	29.13	1.00e-31	130.00
IUUC-Ggo-045451	Gorilla gorilla	30.94	3.00e-31	129.00
IUUC-Hsa-046752	Homo sapiens	30.94	2.00e-31	129.00
IUUC-Itr-048562	Ictidomys tridecemlineatus	31.96	3.00e-11	62.40
IUUC-Lch-049676	Latimeria chalumnae	30.06	1.00e-31	130.00
IUUC-Loc-052200	Lepisosteus oculatus	29.48	5.00e-30	124.00
IUUC-Laf-053783	Loxodonta africana	29.32	7.00e-24	104.00
IUUC-Mcc-055495	Macaca mulatta	30.94	3.00e-31	129.00
IUUC-Meu-056044	Macropus eugenii	27.73	8.00e-20	91.30
IUUC-Mga-059650	Meleagris gallopavo	29.95	3.00e-15	75.90
IUUC-Mdo-063059	Monodelphis domestica	30.21	2.00e-31	129.00
IUUC-Mmu-063315	Mus musculus	31.22	1.00e-31	130.00
IUUC-Mpu-066563	Mustela putorius furo	29.45	3.00e-22	99.40
IUUC-Mlu-067408	Myotis lucifugus	29.50	3.00e-24	105.00
IUUC-Nle-069574	Nomascus leucogenys	30.94	4.00e-31	129.00
IUUC-Opr-070491	Ochotona princeps	33.65	4.00e-13	68.90
IUUC-Ont-071270	Oreochromis niloticus	28.76	2.00e-30	126.00
IUUC-Oan-073632	Ornithorhynchus anatinus	29.41	6.00e-25	107.00
IUUC-Ocu-074329	Oryctolagus cuniculus	30.94	2.00e-31	130.00
IUUC-Oga-088295	Otolemur garnettii	29.23	6.00e-24	105.00
IUUC-Oar-089609	Ovis aries	29.56	5.00e-26	112.00
IUUC-Ptr-090891	Pan troglodytes	30.94	2.00e-31	129.00
IUUC-Pan-092220	Papio anubis	30.85	3.00e-31	129.00
IUUC-Pfo-096844	Poecilia formosa	28.01	8.00e-28	118.00
IUUC-Pab-098512	Pongo abelii	30.94	4.00e-31	129.00
IUUC-Pca-100999	Procavia capensis	27.41	1.00e-19	90.90
IUUC-Pva-102524	Pteropus vampyrus	30.94	2.00e-31	129.00
IUUC-Rno-104861	Rattus norvegicus	31.22	1.00e-31	130.00
IUUC-Sha-106554	Sarcophilus harrisii	31.31	2.00e-15	74.30
IUUC-Ssc-115431	Sus scrofa	36.00	5.00e-12	61.60
IUUC-Tgu-117355	Taeniopygia guttata	30.66	1.00e-30	127.00
IUUC-Tru-118672	Takifugu rubripes	29.92	2.00e-32	132.00
IUUC-Tni-120215	Tetraodon nigroviridis	28.03	6.00e-28	117.00
IUUC-Ttr-128965	Tursiops truncatus	29.28	6.00e-24	104.00
IUUC-Vpa-130586	Vicugna pacos	29.28	1.00e-23	103.00
IUUC-Xtr-132611	Xenopus tropicalis	27.64	5.00e-20	92.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence