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Tag Content
UUCD2 ID IUUC-Aly-005550
UUCD1 version UUC-ArL-00873
Ensembl Protein ID fgenesh2_kg.6__3580__AT4G01270.1
UniProt Accession D7M4X3; D7M4X3_ARALL
Genbank Protein ID EFH51251.1
Protein Name Zinc finger family protein
Genbank Nucleotide ID GL348718
Gene Name ARALYDRAFT_490446
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.6__3580__AT4G01270.1 fgenesh2_kg.6__3580__AT4G01270.1 fgenesh2_kg.6__3580__AT4G01270.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 3.60e-08 34.5 14 62
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlp......CgHvfhadClqkw.pglknssskefrCPlCr 46
           C+iC+ed+k  p+v +      CgHvfh+ Clq+w  + +  s ++ +CP+C+
   Q: 14   CSICYEDLK--PVVENlqsisaCGHVFHELCLQQWfEYCP--STNKRNCPICK 62
           ********4..44422334556*************55555..999999****6 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MAMAEENAAG NAICSICYED LKPVVENLQS ISACGHVFHE LCLQQWFEYC PSTNKRNCPI 60
CKQKCSLKDP CRLYFQSSGN QITSEKVVEI EEDPVLLRGE VKRLQGKIQN LTSALEAKKK 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-005550|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCTATGG CAGAAGAAAA CGCGGCGGGG AATGCTATTT GTTCAATCTG CTACGAAGAT 60
CTCAAACCGG TGGTTGAGAA TCTGCAATCA ATCTCCGCTT GTGGCCATGT CTTTCACGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-005550|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0008270--F:zinc ion binding
KEGG aly:ARALYDRAFT_490446
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002646 Amborella trichopoda 44.85 1.00e-56 213.00
IUUC-Ath-007362 Arabidopsis thaliana 88.95 0.00e+00 858.00
IUUC-Bdi-014334 Brachypodium distachyon 39.68 1.00e-51 196.00
IUUC-Bol-015839 Brassica oleracea 74.71 0.00e+00 699.00
IUUC-Bra-017106 Brassica rapa 73.74 0.00e+00 702.00
IUUC-Cja-019866 Callithrix jacchus 35.94 4.00e-07 48.10
IUUC-Cfa-021176 Canis familiaris 35.94 4.00e-07 48.10
IUUC-Csa-023727 Chlorocebus sabaeus 35.94 4.00e-07 48.10
IUUC-Cho-025016 Choloepus hoffmanni 35.94 4.00e-07 48.10
IUUC-Dno-029737 Dasypus novemcinctus 35.94 4.00e-07 48.10
IUUC-Dor-031070 Dipodomys ordii 35.94 6.00e-07 47.40
IUUC-Ete-032964 Echinops telfairi 36.51 6.00e-07 47.40
IUUC-Eca-034398 Equus caballus 35.94 4.00e-07 48.10
IUUC-Eeu-034508 Erinaceus europaeus 34.38 1.00e-06 46.60
IUUC-Gmo-038704 Gadus morhua 24.64 1.00e-08 53.50
IUUC-Gma-042775 Glycine max 58.15 2.00e-70 259.00
IUUC-Ggo-045576 Gorilla gorilla 35.94 4.00e-07 48.10
IUUC-Hsa-046468 Homo sapiens 35.94 4.00e-07 48.10
IUUC-Hvu-047625 Hordeum vulgare 42.16 7.00e-54 204.00
IUUC-Lpe-051238 Leersia perrieri 39.10 6.00e-48 184.00
IUUC-Mcc-055492 Macaca mulatta 35.94 4.00e-07 48.10
IUUC-Mtr-058033 Medicago truncatula 56.21 5.00e-80 291.00
IUUC-Mdo-061826 Monodelphis domestica 35.94 4.00e-07 48.10
IUUC-Mmu-063717 Mus musculus 35.94 4.00e-07 48.10
IUUC-Mac-064444 Musa acuminata 45.12 9.00e-63 233.00
IUUC-Nle-069734 Nomascus leucogenys 35.94 4.00e-07 48.10
IUUC-Opr-070342 Ochotona princeps 37.10 6.00e-07 47.40
IUUC-Ont-071973 Oreochromis niloticus 23.81 9.00e-10 57.40
IUUC-Ocu-074363 Oryctolagus cuniculus 35.94 4.00e-07 48.10
IUUC-Oba-075193 Oryza barthii 41.46 5.00e-45 174.00
IUUC-Ogl-077006 Oryza glaberrima 42.81 1.00e-45 177.00
IUUC-Ogu-078240 Oryza glumaepatula 56.00 4.00e-22 99.40
IUUC-Oin-079866 Oryza indica 43.15 1.00e-49 190.00
IUUC-Olo-081029 Oryza longistaminata 41.46 5.00e-44 171.00
IUUC-Ome-081703 Oryza meridionalis 41.40 8.00e-43 167.00
IUUC-Oni-082490 Oryza nivara 45.81 3.00e-22 99.40
IUUC-Opu-083315 Oryza punctata 41.11 2.00e-42 166.00
IUUC-Oru-084228 Oryza rufipogon 42.81 2.00e-47 182.00
IUUC-Osa-085981 Oryza sativa 43.15 8.00e-50 191.00
IUUC-Oga-089139 Otolemur garnettii 35.62 7.00e-07 47.00
IUUC-Oar-090243 Ovis aries 35.94 4.00e-07 48.10
IUUC-Ptr-091374 Pan troglodytes 35.94 4.00e-07 48.10
IUUC-Pan-092115 Papio anubis 35.94 4.00e-07 48.10
IUUC-Psi-093782 Pelodiscus sinensis 30.97 3.00e-08 52.40
IUUC-Ppa-095896 Physcomitrella patens 41.72 5.00e-53 201.00
IUUC-Pab-098579 Pongo abelii 35.94 4.00e-07 48.10
IUUC-Pop-099603 Populus trichocarpa 44.75 1.00e-107 382.00
IUUC-Ppe-101685 Prunus persica 51.05 8.00e-68 249.00
IUUC-Pva-102111 Pteropus vampyrus 35.94 5.00e-07 47.80
IUUC-Rno-105364 Rattus norvegicus 35.94 4.00e-07 48.10
IUUC-Sha-107005 Sarcophilus harrisii 35.94 4.00e-07 48.10
IUUC-Sit-109687 Setaria italica 43.63 1.00e-42 167.00
IUUC-Sly-111145 Solanum lycopersicum 56.70 1.00e-79 290.00
IUUC-Stu-112328 Solanum tuberosum 55.48 1.00e-79 290.00
IUUC-Sar-113163 Sorex araneus 35.94 4.00e-07 48.10
IUUC-Sbi-114760 Sorghum bicolor 42.75 6.00e-40 158.00
IUUC-Sre-115057 Sporisorium reilianum 23.65 1.00e-07 50.80
IUUC-Tsy-118809 Tarsius syrichta 38.89 3.00e-07 48.50
IUUC-Tca-121056 Theobroma cacao 50.29 5.00e-70 258.00
IUUC-Tur-126115 Triticum urartu 40.73 3.00e-51 196.00
IUUC-Ttr-128687 Tursiops truncatus 41.51 1.00e-07 50.40
IUUC-Vvi-130955 Vitis vinifera 58.78 4.00e-77 281.00
IUUC-Xma-133304 Xiphophorus maculatus 22.73 3.00e-08 52.80
Created Date 25-Jun-2017

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