iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016850

Ensembl Protein ID

Bra023316.1-P

UniProt Accession

M4E3G4; M4E3G4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra023316	Bra023316.1	Bra023316.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-09	37.0	196	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWD 29
           gH ++v+c+af  ++ ++l+s+++   i vW 
   Q: 196  GHPGGVRCVAFteDGkHILSSAAGERYIAVWK 227
           899********9655555677889999****8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSLVNIKDVL TSFSPALDYL ALSSGDGRIK IWDTVKGQVQ TEFADIASSE ETNIYTNGGK 60
GHLSVDYTCM KWLSLERKKK RKLGTSILVL GTGGGDVLAL DVASGQLKWR ISDCHPGGVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTGG TGAACATTAA GGATGTGTTG ACTTCTTTCA GCCCTGCTCT TGACTATCTC 60
GCTCTTAGCT CCGGTGATGG CCGTATCAAG GTACCTGTTC AGTTTCTATT CAAAGGAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	27.61	4.00e-24	106.00
IUUC-Atr-002533	Amborella trichopoda	46.79	7.00e-144	503.00
IUUC-Apl-003242	Anas platyrhynchos	22.30	1.00e-18	87.40
IUUC-Aca-004607	Anolis carolinensis	22.60	4.00e-23	102.00
IUUC-Ame-011014	Astyanax mexicanus	27.56	3.00e-22	100.00
IUUC-Bta-012605	Bos taurus	26.94	1.00e-22	101.00
IUUC-Cja-019620	Callithrix jacchus	27.27	7.00e-24	105.00
IUUC-Cfa-020520	Canis familiaris	27.61	4.00e-24	106.00
IUUC-Cho-024726	Choloepus hoffmanni	26.60	7.00e-23	102.00
IUUC-Cin-025761	Ciona intestinalis	22.66	4.00e-12	66.20
IUUC-Dno-030031	Dasypus novemcinctus	22.58	7.00e-24	105.00
IUUC-Dme-031653	Drosophila melanogaster	22.43	6.00e-14	72.40
IUUC-Ete-032863	Echinops telfairi	27.01	3.00e-08	53.50
IUUC-Eca-033243	Equus caballus	22.59	1.00e-16	81.30
IUUC-Fca-036009	Felis catus	23.21	5.00e-24	105.00
IUUC-Fal-037264	Ficedula albicollis	22.66	4.00e-18	85.90
IUUC-Gmo-039124	Gadus morhua	26.94	2.00e-28	120.00
IUUC-Gga-040862	Gallus gallus	26.78	5.00e-25	108.00
IUUC-Gac-041468	Gasterosteus aculeatus	31.58	7.00e-28	118.00
IUUC-Gma-042795	Glycine max	56.18	2.00e-170	592.00
IUUC-Ggo-044432	Gorilla gorilla	27.95	3.00e-24	106.00
IUUC-Hsa-047036	Homo sapiens	27.27	7.00e-24	105.00
IUUC-Hvu-047736	Hordeum vulgare	26.17	1.00e-22	100.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	22.70	2.00e-24	107.00
IUUC-Laf-053462	Loxodonta africana	24.79	2.00e-25	110.00
IUUC-Mcc-055239	Macaca mulatta	27.95	4.00e-24	106.00
IUUC-Mga-060079	Meleagris gallopavo	22.30	1.00e-18	88.20
IUUC-Mmr-061472	Microcebus murinus	27.27	1.00e-23	104.00
IUUC-Mmu-063354	Mus musculus	22.82	2.00e-24	107.00
IUUC-Mac-065064	Musa acuminata	56.54	5.00e-135	474.00
IUUC-Mpu-066877	Mustela putorius furo	23.12	2.00e-24	107.00
IUUC-Mlu-067476	Myotis lucifugus	21.73	1.00e-19	91.30
IUUC-Nle-069119	Nomascus leucogenys	27.95	3.00e-24	106.00
IUUC-Oan-072944	Ornithorhynchus anatinus	26.01	2.00e-15	77.40
IUUC-Ocu-074472	Oryctolagus cuniculus	27.61	2.00e-23	104.00
IUUC-Ola-086626	Oryzias latipes	23.99	4.00e-32	132.00
IUUC-Oga-087911	Otolemur garnettii	24.29	5.00e-25	109.00
IUUC-Ptr-091603	Pan troglodytes	27.27	7.00e-24	105.00
IUUC-Pan-092569	Papio anubis	27.95	4.00e-24	106.00
IUUC-Pfo-097292	Poecilia formosa	29.82	9.00e-27	115.00
IUUC-Pab-097878	Pongo abelii	27.27	8.00e-24	105.00
IUUC-Pca-100941	Procavia capensis	31.22	4.00e-18	86.30
IUUC-Pva-102493	Pteropus vampyrus	31.41	1.00e-17	84.70
IUUC-Rno-105084	Rattus norvegicus	27.70	2.00e-23	103.00
IUUC-Sha-107486	Sarcophilus harrisii	23.13	6.00e-25	108.00
IUUC-Smo-108825	Selaginella moellendorffii	33.50	9.00e-70	257.00
IUUC-Sit-110825	Setaria italica	46.27	9.00e-138	483.00
IUUC-Tgu-116726	Taeniopygia guttata	22.99	1.00e-24	107.00
IUUC-Tbe-127832	Tupaia belangeri	28.05	2.00e-16	80.50
IUUC-Ttr-128812	Tursiops truncatus	23.43	3.00e-18	87.00
IUUC-Xma-133557	Xiphophorus maculatus	28.39	3.00e-28	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence