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Tag Content
iUUCD ID IUUC-Hvu-047556
Ensembl Protein ID MLOC_29110.1
UniProt Accession Q6RYF4; Q6RYF4_HORVV
Genbank Protein ID AAS58474.1
Protein Name Coatomer subunit alpha
Genbank Nucleotide ID AY485643
Gene Name 615K1.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MLOC_29110 MLOC_29110.3 MLOC_29110.3
MLOC_29110 MLOC_29110.1 MLOC_29110.1
MLOC_29110 MLOC_29110.4 MLOC_29110.4
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.90e-39 131.4 50 86
UBD/Beta-Prp 1.30e-77 262.0 3 323
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW+++t+++l
   Q: 50   HDGPVRGVHFhKTqPLFVSGGDDYKIKVWNYKTHRCL 86
           99*********4459********************98 PP
   

   UBD/Beta-Prp
   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
           t +++++++++ ++f+p +++++++  +g ++ wd+++g+ll ++ +h+++v+ v f+++++++v+g++D+ ikvw+++t  c+ tl+gh d+++++
   Q: 3    TKFETKSNRVKGLAFHPRRPWILASLHSGVVQMWDYRMGTLLDRFDEHDGPVRGVHFHKTQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTV 99
           67889999***************************************************************************************** PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..........................ktgkl 171
           +f+ +  ++vs+s+d+tirvw++++++c+  +l+gh++ v+c+++hp+++l+vs+slD+tvr+Wd+                               
   Q: 100  QFHDEHPWIVSASDDQTIRVWNWQSRTCVA-VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIgalrkkssspaddimrltqmntdlfgG---- 191
           ******************************.********************************************999999666655555553.... PP
   S: 172  lrtl.......tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllkt 259
                       +gh++ v++ sf+++ + +vsg++d++vklw +  ++   v+tl+gh +nv++v f+ +++++vs s+D+sir+Wd ++++ ++t
   Q: 192  ---IdavvkyvLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAweVDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTGIQT 285
           ...04444445555********************************777668********************************************* PP
   S: 260  lqlhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           + +++++++  a+ +++ n l++g  ds   ++kl++++p
   Q: 286  FRREHDRFWVLAA-HPEMNLLAAG-HDSGMIVFKLERERP 323
           *************.6666655555.689999999988765 PP
   
Organism Hordeum vulgare
Functional Description
(View)

Functional Description


     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
Protein Sequence
(Fasta)
MLTKFETKSN RVKGLAFHPR RPWILASLHS GVVQMWDYRM GTLLDRFDEH DGPVRGVHFH 60
KTQPLFVSGG DDYKIKVWNY KTHRCLFTLH GHLDYIRTVQ FHDEHPWIVS ASDDQTIRVW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Hvu-047556|E3,WD_repeat;UBD,Beta-Prp|Hordeum vulgare
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTGCAGGCAA CGCAAAGCGC TGGCGATGGC GGGGATCCGA CGGCCGGGGA CGGCCCGGGG 60
CCCGCGCTCG TCGGTGCGGA TGGAGTAGAT TAAAGATCCC CACCACCACC ACCACCACCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Hvu-047556|E3,WD_repeat;UBD,Beta-Prp|Hordeum vulgare
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000201 Aegilops tauschii 99.24 0.00e+00 2393.00
IUUC-Aml-001758 Ailuropoda melanoleuca 54.02 0.00e+00 1344.00
IUUC-Atr-002493 Amborella trichopoda 79.90 0.00e+00 1986.00
IUUC-Apl-003385 Anas platyrhynchos 49.40 0.00e+00 1031.00
IUUC-Aca-005154 Anolis carolinensis 76.08 4.00e-94 335.00
IUUC-Aly-006020 Arabidopsis lyrata 76.09 0.00e+00 1910.00
IUUC-Ath-007058 Arabidopsis thaliana 77.03 0.00e+00 1934.00
IUUC-Ago-007992 Ashbya gossypii 43.79 0.00e+00 977.00
IUUC-Acl-008027 Aspergillus clavatus 55.54 0.00e+00 970.00
IUUC-Afl-008644 Aspergillus flavus 56.42 0.00e+00 979.00
IUUC-Afu-008964 Aspergillus fumigatus 48.10 0.00e+00 1126.00
IUUC-Ani-009379 Aspergillus nidulans 55.84 0.00e+00 980.00
IUUC-Aor-010174 Aspergillus oryzae 56.42 0.00e+00 978.00
IUUC-Ate-010302 Aspergillus terreus 47.70 0.00e+00 1134.00
IUUC-Ame-011229 Astyanax mexicanus 53.48 0.00e+00 1313.00
IUUC-Bta-012524 Bos taurus 54.49 0.00e+00 1337.00
IUUC-Bci-013781 Botrytis cinerea 47.61 0.00e+00 1117.00
IUUC-Bdi-014214 Brachypodium distachyon 95.32 0.00e+00 2382.00
IUUC-Bol-015925 Brassica oleracea 74.37 0.00e+00 1874.00
IUUC-Bra-016978 Brassica rapa 76.49 0.00e+00 1919.00
IUUC-Cel-018115 Caenorhabditis elegans 54.57 0.00e+00 923.00
IUUC-Cja-019107 Callithrix jacchus 53.90 0.00e+00 1323.00
IUUC-Cfa-020675 Canis familiaris 53.68 0.00e+00 1316.00
IUUC-Cpo-021813 Cavia porcellus 54.57 0.00e+00 1352.00
IUUC-Cre-022969 Chlamydomonas reinhardtii 68.51 0.00e+00 1223.00
IUUC-Csa-023523 Chlorocebus sabaeus 55.05 0.00e+00 1359.00
IUUC-Cho-024704 Choloepus hoffmanni 41.90 9.00e-171 593.00
IUUC-Cin-025572 Ciona intestinalis 50.52 0.00e+00 1241.00
IUUC-Csv-025864 Ciona savignyi 56.31 0.00e+00 967.00
IUUC-Cgl-026510 Colletotrichum gloeosporioides 55.74 0.00e+00 976.00
IUUC-Cne-027053 Cryptococcus neoformans 50.60 0.00e+00 1177.00
IUUC-Cme-027222 Cyanidioschyzon merolae 42.58 3.00e-146 511.00
IUUC-Dre-027421 Danio rerio 53.93 0.00e+00 1332.00
IUUC-Dno-029303 Dasypus novemcinctus 54.57 0.00e+00 1354.00
IUUC-Dor-030290 Dipodomys ordii 52.99 6.00e-165 573.00
IUUC-Dse-031543 Dothistroma septosporum 45.93 0.00e+00 1053.00
IUUC-Dme-031945 Drosophila melanogaster 52.04 0.00e+00 1241.00
IUUC-Ete-032873 Echinops telfairi 51.00 0.00e+00 1165.00
IUUC-Eca-033773 Equus caballus 53.83 0.00e+00 1316.00
IUUC-Eeu-034874 Erinaceus europaeus 41.99 0.00e+00 658.00
IUUC-Fca-035739 Felis catus 53.99 0.00e+00 1313.00
IUUC-Fal-037263 Ficedula albicollis 51.26 0.00e+00 1200.00
IUUC-Fox-037738 Fusarium oxysporum 47.46 0.00e+00 1117.00
IUUC-Fso-038153 Fusarium solani 46.92 0.00e+00 1098.00
IUUC-Gmo-039602 Gadus morhua 50.44 0.00e+00 1221.00
IUUC-Ggr-039931 Gaeumannomyces graminis 54.59 0.00e+00 965.00
IUUC-Gga-040590 Gallus gallus 54.41 0.00e+00 1350.00
IUUC-Gac-041318 Gasterosteus aculeatus 53.82 0.00e+00 1337.00
IUUC-Gma-043894 Glycine max 76.15 0.00e+00 1964.00
IUUC-Ggo-045029 Gorilla gorilla 54.57 0.00e+00 1347.00
IUUC-Hsa-046078 Homo sapiens 54.57 0.00e+00 1347.00
IUUC-Itr-048881 Ictidomys tridecemlineatus 45.58 0.00e+00 749.00
IUUC-Kpa-049256 Komagataella pastoris 44.96 0.00e+00 1049.00
IUUC-Lch-049706 Latimeria chalumnae 54.27 0.00e+00 1340.00
IUUC-Loc-051867 Lepisosteus oculatus 48.90 0.00e+00 810.00
IUUC-Laf-053510 Loxodonta africana 55.26 0.00e+00 1374.00
IUUC-Mcc-055836 Macaca mulatta 54.58 0.00e+00 1345.00
IUUC-Mor-057172 Magnaporthe oryzae 46.59 0.00e+00 1086.00
IUUC-Mpo-057300 Magnaporthe poae 46.55 0.00e+00 1083.00
IUUC-Mtr-058248 Medicago truncatula 76.31 0.00e+00 1961.00
IUUC-Mla-059019 Melampsora laricipopulina 49.96 0.00e+00 1207.00
IUUC-Mga-059499 Meleagris gallopavo 54.32 0.00e+00 1345.00
IUUC-Mvi-060336 Microbotryum violaceum 50.77 0.00e+00 1206.00
IUUC-Mmr-061102 Microcebus murinus 54.10 0.00e+00 1335.00
IUUC-Mdo-062594 Monodelphis domestica 55.46 0.00e+00 1379.00
IUUC-Mmu-063736 Mus musculus 53.86 0.00e+00 1338.00
IUUC-Mac-065398 Musa acuminata 76.19 0.00e+00 1941.00
IUUC-Mpu-066701 Mustela putorius furo 54.97 0.00e+00 1352.00
IUUC-Mlu-067392 Myotis lucifugus 55.13 0.00e+00 1347.00
IUUC-Nfi-068270 Neosartorya fischeri 56.13 0.00e+00 976.00
IUUC-Ncr-068892 Neurospora crassa 47.15 0.00e+00 1095.00
IUUC-Nle-069634 Nomascus leucogenys 65.42 0.00e+00 937.00
IUUC-Ont-072488 Oreochromis niloticus 53.68 0.00e+00 1332.00
IUUC-Ocu-074211 Oryctolagus cuniculus 54.49 0.00e+00 1351.00
IUUC-Olo-080466 Oryza longistaminata 93.39 0.00e+00 1630.00
IUUC-Ome-081668 Oryza meridionalis 82.94 0.00e+00 1868.00
IUUC-Ola-086921 Oryzias latipes 50.86 0.00e+00 1273.00
IUUC-Olu-087639 Ostreococcus lucimarinus 60.82 0.00e+00 1512.00
IUUC-Oga-087991 Otolemur garnettii 51.98 0.00e+00 1267.00
IUUC-Oar-089590 Ovis aries 54.33 0.00e+00 1354.00
IUUC-Ptr-090808 Pan troglodytes 54.65 0.00e+00 1348.00
IUUC-Pan-092475 Papio anubis 54.85 0.00e+00 1350.00
IUUC-Psi-093044 Pelodiscus sinensis 54.09 0.00e+00 878.00
IUUC-Ppa-095785 Physcomitrella patens 67.48 0.00e+00 1750.00
IUUC-Pfo-097493 Poecilia formosa 54.01 0.00e+00 1325.00
IUUC-Pab-098497 Pongo abelii 54.97 0.00e+00 1359.00
IUUC-Pop-099992 Populus trichocarpa 79.02 0.00e+00 1964.00
IUUC-Pca-100413 Procavia capensis 60.61 0.00e+00 688.00
IUUC-Ppe-101392 Prunus persica 79.26 0.00e+00 2013.00
IUUC-Pva-102126 Pteropus vampyrus 52.17 0.00e+00 1278.00
IUUC-Pgr-103376 Puccinia graminis 50.36 0.00e+00 1219.00
IUUC-Ptt-103978 Puccinia triticina 44.16 0.00e+00 981.00
IUUC-Pte-104126 Pyrenophora teres 46.43 0.00e+00 1055.00
IUUC-Rno-105428 Rattus norvegicus 54.17 0.00e+00 1345.00
IUUC-Sce-106464 Saccharomyces cerevisiae 42.18 0.00e+00 932.00
IUUC-Sha-107301 Sarcophilus harrisii 54.09 0.00e+00 1340.00
IUUC-Sja-107961 Schizosaccharomyces japonicus 44.21 0.00e+00 1049.00
IUUC-Spo-108217 Schizosaccharomyces pombe 44.07 0.00e+00 1037.00
IUUC-Ssl-108643 Sclerotinia sclerotiorum 47.36 0.00e+00 1114.00
IUUC-Smo-109582 Selaginella moellendorffii 66.48 0.00e+00 1717.00
IUUC-Sit-109697 Setaria italica 89.66 0.00e+00 2232.00
IUUC-Sly-111759 Solanum lycopersicum 78.20 0.00e+00 1995.00
IUUC-Stu-112564 Solanum tuberosum 78.36 0.00e+00 1995.00
IUUC-Sbi-114388 Sorghum bicolor 89.66 0.00e+00 2231.00
IUUC-Sre-115209 Sporisorium reilianum 55.30 0.00e+00 998.00
IUUC-Ssc-115933 Sus scrofa 54.49 0.00e+00 1355.00
IUUC-Tgu-117109 Taeniopygia guttata 50.00 3.00e-103 367.00
IUUC-Tru-117772 Takifugu rubripes 53.37 0.00e+00 1304.00
IUUC-Tsy-119105 Tarsius syrichta 51.88 0.00e+00 1019.00
IUUC-Tni-120556 Tetraodon nigroviridis 41.29 0.00e+00 880.00
IUUC-Tca-121545 Theobroma cacao 78.28 0.00e+00 2008.00
IUUC-Tre-121951 Trichoderma reesei 46.19 0.00e+00 1075.00
IUUC-Tae-123688 Triticum aestivum 99.26 0.00e+00 2479.00
IUUC-Tur-126016 Triticum urartu 99.13 0.00e+00 2309.00
IUUC-Tme-127170 Tuber melanosporum 47.61 0.00e+00 1151.00
IUUC-Tbe-127882 Tupaia belangeri 68.39 4.00e-127 448.00
IUUC-Ttr-128217 Tursiops truncatus 52.17 0.00e+00 1278.00
IUUC-Uma-129337 Ustilago maydis 55.30 0.00e+00 995.00
IUUC-Vda-129828 Verticillium dahliae 47.33 0.00e+00 1094.00
IUUC-Vpa-130537 Vicugna pacos 54.33 0.00e+00 1323.00
IUUC-Vvi-130958 Vitis vinifera 79.02 0.00e+00 1989.00
IUUC-Xtr-132857 Xenopus tropicalis 52.20 0.00e+00 1255.00
IUUC-Xma-133138 Xiphophorus maculatus 54.01 0.00e+00 1327.00
IUUC-Yli-134399 Yarrowia lipolytica 48.90 0.00e+00 830.00
IUUC-Zma-135612 Zea mays 87.27 0.00e+00 2233.00
Created Date 25-Jun-2017

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