iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Rno-105436

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

E3 ubiquitin-protein ligase RNF187

Genbank Nucleotide ID

AC099089

Gene Name

Rnf187

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000049219.1	ENSRNOT00000073082.1	ENSRNOP00000065797.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	94.92	4.00e-96	348.00	IUUC-Hsa-046778

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

LALPAGPAEA ICALCQRAPR EPVRADCGHR FCRACVVRFW AEEDGPFPCP ECADDCWQRA 60
VEPSRPPLSR RLLALEEAAA APARDGPASE AALQLLCRAD GDPLCSACRM AAGPEPPEWE 120

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Nucleotide Sequence
(Fasta)

GCCTTGCTCT CTGGCCGGTC CTCGGCCCTT CTGCGCCCTC TCTGCCCGCG TCCTCGTCGG 60
CGCCGCCGCC CGCAGCCCTG GCGCTCCCCG CGGGCCCCGC TGAGGCCATC TGCGCCTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865--P:protein autoubiquitination
GO:0070936--P:protein K48-linked ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002191	Ailuropoda melanoleuca	85.98	7.00e-48	181.00
IUUC-Bta-012513	Bos taurus	91.10	1.00e-91	328.00
IUUC-Cja-019008	Callithrix jacchus	85.37	1.00e-54	204.00
IUUC-Cpo-022460	Cavia porcellus	86.30	7.00e-73	266.00
IUUC-Csa-024164	Chlorocebus sabaeus	94.49	9.00e-57	211.00
IUUC-Dno-029128	Dasypus novemcinctus	81.31	1.00e-32	130.00
IUUC-Ete-033026	Echinops telfairi	81.33	8.00e-16	74.70
IUUC-Eca-034206	Equus caballus	86.79	6.00e-36	141.00
IUUC-Fca-035393	Felis catus	72.06	4.00e-38	149.00
IUUC-Ggo-045548	Gorilla gorilla	94.49	9.00e-57	211.00
IUUC-Hsa-046778	Homo sapiens	95.02	1.00e-89	322.00
IUUC-Itr-047955	Ictidomys tridecemlineatus	89.62	4.00e-50	189.00
IUUC-Laf-054276	Loxodonta africana	89.29	3.00e-40	156.00
IUUC-Mcc-054972	Macaca mulatta	95.02	1.00e-89	322.00
IUUC-Mmu-063109	Mus musculus	99.15	5.00e-104	369.00
IUUC-Mpu-066574	Mustela putorius furo	82.65	5.00e-29	119.00
IUUC-Mlu-067760	Myotis lucifugus	92.31	1.00e-91	329.00
IUUC-Nle-069556	Nomascus leucogenys	91.23	3.00e-55	206.00
IUUC-Ocu-074636	Oryctolagus cuniculus	80.80	3.00e-51	193.00
IUUC-Oga-088384	Otolemur garnettii	92.31	3.00e-86	310.00
IUUC-Oar-090060	Ovis aries	88.82	5.00e-58	217.00
IUUC-Ptr-090496	Pan troglodytes	93.40	1.00e-52	197.00
IUUC-Pan-091825	Papio anubis	95.02	1.00e-89	322.00
IUUC-Pca-100168	Procavia capensis	83.04	2.00e-36	144.00
IUUC-Tbe-127513	Tupaia belangeri	63.28	2.00e-27	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence