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Tag Content
UUCD2 ID IUUC-Sbi-114637
UUCD1 version UUC-SoB-00150
Ensembl Protein ID Sb01g013730.1
UniProt Accession C5WR88; C5WR88_SORBI
Genbank Protein ID EER91180.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000760
Gene Name SORBI_001G157600
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb01g013730 Sb01g013730.1 Sb01g013730.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.90e-31 106.0 278 311
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+++v+claf   +++ +++Gs D+t+k++Dlr+
   Q: 278  HQGEVNCLAFnpfNEWVVATGSTDKTVKLFDLRK 311
           9**********977799**************986 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MPKAGGGAAD EEEFRAEVEE RLINEEYKIW KKNTPFLYDL VITHALEWPS LTVQWLPDRT 60
EPPGKDHSVQ KMILGTHTSD NEPNYLMLAQ VQLPLDDAEA DARHYDDEHT DIGGFGAASG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-114637|E3,WD_repeat|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACCTCTACTA GTCTACTGCA GCCGCTCTTC CCCACCATTG TCCCCTTCGC TCAATCTCTC 60
CACCCCTGCA CTTCCTCCCG CCATTTCGCC CCCCGCTCGC CAACCCAAAC CCCCTCTGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114637|E3,WD_repeat|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0009507--C:chloroplast
GO:0005677--C:chromatin silencing complex
GO:0043234--C:protein complex
GO:0008283--P:cell proliferation
GO:0009793--P:embryo development ending in seed dormancy
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009555--P:pollen development
GO:0045787--P:positive regulation of cell cycle
GO:0009909--P:regulation of flower development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:2000653--P:regulation of genetic imprinting
GO:0010214--P:seed coat development
GO:0010026--P:trichome differentiation
KEGG sbi:SORBI_01g013730
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000757 Aegilops tauschii 85.57 0.00e+00 708.00
IUUC-Aml-001339 Ailuropoda melanoleuca 67.50 6.00e-159 552.00
IUUC-Atr-003075 Amborella trichopoda 86.62 0.00e+00 758.00
IUUC-Apl-003952 Anas platyrhynchos 68.25 2.00e-163 567.00
IUUC-Aca-004508 Anolis carolinensis 68.25 3.00e-163 566.00
IUUC-Aly-006342 Arabidopsis lyrata 86.41 0.00e+00 754.00
IUUC-Ath-006855 Arabidopsis thaliana 86.62 0.00e+00 755.00
IUUC-Ago-007892 Ashbya gossypii 37.79 6.00e-72 263.00
IUUC-Acl-008163 Aspergillus clavatus 48.04 6.00e-112 396.00
IUUC-Afl-008645 Aspergillus flavus 48.55 1.00e-112 399.00
IUUC-Afu-009091 Aspergillus fumigatus 48.28 5.00e-111 393.00
IUUC-Ani-009478 Aspergillus nidulans 45.21 7.00e-95 339.00
IUUC-Ang-009707 Aspergillus niger 48.04 3.00e-109 387.00
IUUC-Aor-010028 Aspergillus oryzae 48.55 1.00e-112 399.00
IUUC-Ate-010416 Aspergillus terreus 48.28 3.00e-113 400.00
IUUC-Ame-010598 Astyanax mexicanus 67.25 7.00e-161 559.00
IUUC-Bgr-012001 Blumeria graminis 44.64 4.00e-94 337.00
IUUC-Bta-012851 Bos taurus 68.25 2.00e-163 567.00
IUUC-Bci-013815 Botrytis cinerea 45.28 1.00e-109 389.00
IUUC-Bdi-014926 Brachypodium distachyon 95.59 0.00e+00 831.00
IUUC-Bol-015856 Brassica oleracea 83.86 0.00e+00 739.00
IUUC-Bra-016725 Brassica rapa 77.18 0.00e+00 700.00
IUUC-Cel-018587 Caenorhabditis elegans 61.10 2.00e-144 504.00
IUUC-Cja-019884 Callithrix jacchus 68.25 2.00e-163 567.00
IUUC-Cfa-020343 Canis familiaris 68.25 2.00e-163 567.00
IUUC-Cpo-021591 Cavia porcellus 68.25 2.00e-163 567.00
IUUC-Cre-022563 Chlamydomonas reinhardtii 68.91 7.00e-170 588.00
IUUC-Csa-023738 Chlorocebus sabaeus 65.75 6.00e-158 549.00
IUUC-Cho-024506 Choloepus hoffmanni 68.00 7.00e-162 562.00
IUUC-Cin-025589 Ciona intestinalis 65.61 5.00e-160 556.00
IUUC-Csv-026216 Ciona savignyi 64.88 4.00e-159 553.00
IUUC-Cgl-026564 Colletotrichum gloeosporioides 45.43 2.00e-106 378.00
IUUC-Cne-026792 Cryptococcus neoformans 52.88 4.00e-127 447.00
IUUC-Cme-027307 Cyanidioschyzon merolae 49.88 8.00e-121 426.00
IUUC-Dre-028742 Danio rerio 67.25 1.00e-160 558.00
IUUC-Dno-029114 Dasypus novemcinctus 68.25 2.00e-163 567.00
IUUC-Dor-030733 Dipodomys ordii 56.50 1.00e-128 452.00
IUUC-Dse-031282 Dothistroma septosporum 44.56 1.00e-96 345.00
IUUC-Dme-032126 Drosophila melanogaster 64.16 6.00e-160 556.00
IUUC-Ete-032731 Echinops telfairi 68.25 2.00e-163 567.00
IUUC-Eca-033533 Equus caballus 67.00 3.00e-158 550.00
IUUC-Eeu-034644 Erinaceus europaeus 63.23 1.00e-76 279.00
IUUC-Fca-036202 Felis catus 68.25 2.00e-163 567.00
IUUC-Fal-037084 Ficedula albicollis 68.25 3.00e-163 567.00
IUUC-Fox-037974 Fusarium oxysporum 47.83 2.00e-112 398.00
IUUC-Fso-038246 Fusarium solani 45.13 5.00e-99 353.00
IUUC-Gmo-038593 Gadus morhua 66.09 2.00e-160 557.00
IUUC-Ggr-039741 Gaeumannomyces graminis 46.49 7.00e-106 376.00
IUUC-Gga-040396 Gallus gallus 68.25 2.00e-163 567.00
IUUC-Gac-042477 Gasterosteus aculeatus 65.22 4.00e-160 556.00
IUUC-Gma-042791 Glycine max 87.32 0.00e+00 759.00
IUUC-Ggo-045422 Gorilla gorilla 63.21 2.00e-142 498.00
IUUC-Hsa-045683 Homo sapiens 68.25 2.00e-163 567.00
IUUC-Hvu-047457 Hordeum vulgare 96.00 2.00e-113 400.00
IUUC-Itr-047950 Ictidomys tridecemlineatus 68.25 2.00e-163 567.00
IUUC-Kpa-049119 Komagataella pastoris 36.95 7.00e-70 256.00
IUUC-Lch-050545 Latimeria chalumnae 66.58 1.00e-162 565.00
IUUC-Lpe-051337 Leersia perrieri 95.37 0.00e+00 819.00
IUUC-Loc-052473 Lepisosteus oculatus 67.50 5.00e-162 563.00
IUUC-Lma-053275 Leptosphaeria maculans 44.25 6.00e-65 239.00
IUUC-Laf-054114 Loxodonta africana 68.25 2.00e-163 567.00
IUUC-Mcc-055648 Macaca mulatta 67.96 2.00e-163 567.00
IUUC-Meu-056490 Macropus eugenii 68.25 2.00e-163 567.00
IUUC-Mor-056947 Magnaporthe oryzae 46.63 4.00e-103 367.00
IUUC-Mpo-057602 Magnaporthe poae 47.60 1.00e-106 379.00
IUUC-Mtr-057853 Medicago truncatula 86.11 0.00e+00 736.00
IUUC-Mla-058884 Melampsora laricipopulina 51.40 3.00e-120 424.00
IUUC-Mga-059452 Meleagris gallopavo 68.25 2.00e-163 567.00
IUUC-Mvi-060450 Microbotryum violaceum 53.60 5.00e-126 443.00
IUUC-Mmr-060678 Microcebus murinus 67.49 2.00e-158 551.00
IUUC-Mdo-062817 Monodelphis domestica 67.25 2.00e-161 561.00
IUUC-Mmu-063282 Mus musculus 68.25 2.00e-163 567.00
IUUC-Mac-065480 Musa acuminata 88.32 0.00e+00 756.00
IUUC-Mpu-066529 Mustela putorius furo 67.75 3.00e-162 563.00
IUUC-Mlu-068072 Myotis lucifugus 68.25 2.00e-163 567.00
IUUC-Nfi-068374 Neosartorya fischeri 48.28 1.00e-108 385.00
IUUC-Ncr-068794 Neurospora crassa 46.21 2.00e-107 381.00
IUUC-Nle-069577 Nomascus leucogenys 68.25 2.00e-163 567.00
IUUC-Opr-070245 Ochotona princeps 56.00 2.00e-123 434.00
IUUC-Ont-071809 Oreochromis niloticus 67.25 5.00e-161 559.00
IUUC-Oan-072839 Ornithorhynchus anatinus 68.08 8.00e-162 562.00
IUUC-Ocu-074778 Oryctolagus cuniculus 65.75 7.00e-158 549.00
IUUC-Oba-075719 Oryza barthii 80.81 0.00e+00 694.00
IUUC-Obr-076859 Oryza brachyantha 95.38 0.00e+00 813.00
IUUC-Ogl-077920 Oryza glaberrima 94.88 0.00e+00 813.00
IUUC-Ogu-078048 Oryza glumaepatula 80.81 0.00e+00 690.00
IUUC-Oin-079960 Oryza indica 80.10 0.00e+00 651.00
IUUC-Olo-080553 Oryza longistaminata 77.05 0.00e+00 676.00
IUUC-Ome-081835 Oryza meridionalis 95.11 0.00e+00 819.00
IUUC-Oni-082494 Oryza nivara 80.57 0.00e+00 687.00
IUUC-Opu-083913 Oryza punctata 91.46 0.00e+00 767.00
IUUC-Oru-084666 Oryza rufipogon 94.88 0.00e+00 813.00
IUUC-Osa-085884 Oryza sativa 94.88 0.00e+00 813.00
IUUC-Ola-086664 Oryzias latipes 65.78 5.00e-161 559.00
IUUC-Olu-087579 Ostreococcus lucimarinus 69.97 1.00e-162 565.00
IUUC-Oga-088364 Otolemur garnettii 63.18 2.00e-148 517.00
IUUC-Oar-089652 Ovis aries 68.25 2.00e-163 567.00
IUUC-Ptr-091598 Pan troglodytes 65.75 1.00e-157 548.00
IUUC-Pan-092412 Papio anubis 65.75 6.00e-158 549.00
IUUC-Psi-093300 Pelodiscus sinensis 66.75 5.00e-150 523.00
IUUC-Pma-094307 Petromyzon marinus 65.26 8.00e-160 555.00
IUUC-Pno-095153 Phaeosphaeria nodorum 45.02 4.00e-98 350.00
IUUC-Ppa-095800 Physcomitrella patens 77.15 0.00e+00 668.00
IUUC-Pfo-097376 Poecilia formosa 67.08 1.00e-159 555.00
IUUC-Pab-097697 Pongo abelii 68.25 2.00e-163 567.00
IUUC-Pop-099709 Populus trichocarpa 87.83 0.00e+00 764.00
IUUC-Pca-100642 Procavia capensis 60.36 1.00e-135 475.00
IUUC-Ppe-101212 Prunus persica 88.02 0.00e+00 765.00
IUUC-Pva-102253 Pteropus vampyrus 68.25 2.00e-163 567.00
IUUC-Pgr-103441 Puccinia graminis 49.87 3.00e-116 410.00
IUUC-Pte-104332 Pyrenophora teres 45.48 3.00e-100 358.00
IUUC-Pyt-104516 Pyrenophora triticirepentis 45.48 2.00e-100 358.00
IUUC-Rno-105678 Rattus norvegicus 68.25 2.00e-163 567.00
IUUC-Sce-106364 Saccharomyces cerevisiae 35.85 1.00e-64 239.00
IUUC-Sha-106663 Sarcophilus harrisii 68.25 3.00e-163 566.00
IUUC-Sja-108001 Schizosaccharomyces japonicus 47.76 3.00e-105 374.00
IUUC-Spo-108145 Schizosaccharomyces pombe 47.90 1.00e-107 382.00
IUUC-Smo-109159 Selaginella moellendorffii 75.73 0.00e+00 667.00
IUUC-Sit-110144 Setaria italica 98.14 0.00e+00 813.00
IUUC-Sly-111680 Solanum lycopersicum 86.98 0.00e+00 754.00
IUUC-Stu-111931 Solanum tuberosum 87.63 0.00e+00 742.00
IUUC-Sar-113236 Sorex araneus 59.50 1.00e-134 472.00
IUUC-Sre-114980 Sporisorium reilianum 52.71 8.00e-130 456.00
IUUC-Ssc-116352 Sus scrofa 66.00 2.00e-158 551.00
IUUC-Tgu-116925 Taeniopygia guttata 68.00 4.00e-163 566.00
IUUC-Tru-117549 Takifugu rubripes 66.92 1.00e-158 551.00
IUUC-Tsy-118854 Tarsius syrichta 65.75 2.00e-157 548.00
IUUC-Tni-120398 Tetraodon nigroviridis 67.16 9.00e-161 558.00
IUUC-Tca-121841 Theobroma cacao 87.83 0.00e+00 763.00
IUUC-Tre-122190 Trichoderma reesei 48.30 4.00e-105 374.00
IUUC-Tvi-122304 Trichoderma virens 48.07 2.00e-112 398.00
IUUC-Tae-124648 Triticum aestivum 95.13 0.00e+00 789.00
IUUC-Tur-126850 Triticum urartu 91.38 2.00e-177 613.00
IUUC-Tme-126949 Tuber melanosporum 50.00 2.00e-117 414.00
IUUC-Tbe-128010 Tupaia belangeri 59.50 5.00e-135 473.00
IUUC-Ttr-128558 Tursiops truncatus 60.00 2.00e-137 481.00
IUUC-Uma-129424 Ustilago maydis 52.48 7.00e-132 462.00
IUUC-Vda-129873 Verticillium dahliae 46.42 7.00e-109 386.00
IUUC-Vpa-130079 Vicugna pacos 67.75 1.00e-161 561.00
IUUC-Vvi-131585 Vitis vinifera 87.59 0.00e+00 763.00
IUUC-Xtr-132005 Xenopus tropicalis 66.59 2.00e-162 564.00
IUUC-Xma-133066 Xiphophorus maculatus 67.25 5.00e-161 559.00
IUUC-Yli-134334 Yarrowia lipolytica 37.85 9.00e-82 296.00
IUUC-Zma-135873 Zea mays 97.91 0.00e+00 815.00
Created Date 25-Jun-2017

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