iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-040398

Ensembl Protein ID

ENSGALP00000015201.5

UniProt Accession

E1BR41; E1BR41_CHICK

Genbank Protein ID

ENSGALP00000015201

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AADN04000061

Gene Name

DCAF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000009345.5	ENSGALT00000015217.5	ENSGALP00000015201.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-06	26.4	375	412

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H + vt++++   +++l ++   g+ik+WDlrt +++k
   Q: 375  HDSAVTSIRLleAEHYLMASDMAGKIKLWDLRTAKCVK 412
           9999*****98855899999999*************97 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MGRSHGGGKE KRGWGYRRRC HRPPRRRRPN GSHCSDRPEE EEAQSPVNPV PSCSGNPSSS 60
SSTQNSAVPE LPGFYYDPEK NRYFRLLSGH NNYNPLTKES IQYKAMESKR LRLLEEEEQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCAGACGC GCCTGTCGGG CCGAGCTCTG GCGCTCTGGT GGAAGCGGCG GGGAGCGGTG 60
TCGGTGAGGG GCGGCGGGGG GCGGTTGGCC GGGGTCTCGC TTCAGGGCAC GTCTCGTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0008380--P:RNA splicing

KEGG

gga:423253

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	35.04	4.00e-13	67.80
IUUC-Aml-001929	Ailuropoda melanoleuca	72.58	0.00e+00	638.00
IUUC-Atr-002556	Amborella trichopoda	28.82	1.00e-14	74.30
IUUC-Apl-003177	Anas platyrhynchos	94.00	0.00e+00	836.00
IUUC-Aca-004610	Anolis carolinensis	74.75	0.00e+00	769.00
IUUC-Aly-005883	Arabidopsis lyrata	29.14	2.00e-13	70.50
IUUC-Ath-006668	Arabidopsis thaliana	28.73	2.00e-15	77.00
IUUC-Ame-010690	Astyanax mexicanus	71.36	5.00e-177	613.00
IUUC-Bta-012668	Bos taurus	70.80	2.00e-169	588.00
IUUC-Bdi-014848	Brachypodium distachyon	33.56	1.00e-14	73.90
IUUC-Bol-016035	Brassica oleracea	32.40	2.00e-17	83.20
IUUC-Bra-016687	Brassica rapa	31.02	2.00e-16	79.70
IUUC-Cja-019560	Callithrix jacchus	69.75	2.00e-64	237.00
IUUC-Cfa-020441	Canis familiaris	73.67	0.00e+00	651.00
IUUC-Cpo-021299	Cavia porcellus	68.18	0.00e+00	631.00
IUUC-Csa-023185	Chlorocebus sabaeus	71.95	0.00e+00	657.00
IUUC-Cho-024353	Choloepus hoffmanni	71.33	0.00e+00	657.00
IUUC-Dno-029890	Dasypus novemcinctus	71.79	0.00e+00	639.00
IUUC-Dor-030618	Dipodomys ordii	65.93	7.00e-63	234.00
IUUC-Ete-032557	Echinops telfairi	57.51	6.00e-109	387.00
IUUC-Eca-033466	Equus caballus	72.06	0.00e+00	667.00
IUUC-Eeu-034995	Erinaceus europaeus	61.36	2.00e-121	428.00
IUUC-Fca-036199	Felis catus	72.92	0.00e+00	645.00
IUUC-Fal-036717	Ficedula albicollis	89.16	0.00e+00	816.00
IUUC-Gmo-039201	Gadus morhua	66.74	3.00e-173	601.00
IUUC-Gac-042391	Gasterosteus aculeatus	67.51	0.00e+00	643.00
IUUC-Gma-042906	Glycine max	27.67	3.00e-10	60.10
IUUC-Ggo-045348	Gorilla gorilla	71.49	0.00e+00	651.00
IUUC-Hsa-046746	Homo sapiens	71.72	0.00e+00	656.00
IUUC-Hvu-047825	Hordeum vulgare	33.12	2.00e-15	76.60
IUUC-Itr-048472	Ictidomys tridecemlineatus	70.80	0.00e+00	632.00
IUUC-Lch-050272	Latimeria chalumnae	66.82	1.00e-165	575.00
IUUC-Lpe-051618	Leersia perrieri	32.28	2.00e-14	73.60
IUUC-Loc-051772	Lepisosteus oculatus	71.56	0.00e+00	667.00
IUUC-Laf-054577	Loxodonta africana	61.93	7.00e-151	526.00
IUUC-Mcc-055284	Macaca mulatta	63.76	2.00e-155	541.00
IUUC-Meu-056721	Macropus eugenii	72.96	3.00e-108	384.00
IUUC-Mtr-058472	Medicago truncatula	28.48	4.00e-12	65.90
IUUC-Mga-059238	Meleagris gallopavo	98.29	0.00e+00	806.00
IUUC-Mmr-061642	Microcebus murinus	71.09	8.00e-163	566.00
IUUC-Mdo-062030	Monodelphis domestica	81.61	0.00e+00	707.00
IUUC-Mmu-063420	Mus musculus	68.81	0.00e+00	644.00
IUUC-Mac-065231	Musa acuminata	37.23	2.00e-18	87.40
IUUC-Mpu-065692	Mustela putorius furo	72.81	0.00e+00	646.00
IUUC-Mlu-067428	Myotis lucifugus	71.95	0.00e+00	666.00
IUUC-Nle-070145	Nomascus leucogenys	71.72	0.00e+00	655.00
IUUC-Opr-071081	Ochotona princeps	66.81	2.00e-172	598.00
IUUC-Ont-071302	Oreochromis niloticus	68.36	0.00e+00	630.00
IUUC-Oan-073494	Ornithorhynchus anatinus	67.29	2.00e-142	499.00
IUUC-Ocu-073925	Oryctolagus cuniculus	70.57	0.00e+00	628.00
IUUC-Oba-075797	Oryza barthii	32.05	1.00e-13	70.90
IUUC-Obr-076014	Oryza brachyantha	33.99	9.00e-15	74.70
IUUC-Ogl-077201	Oryza glaberrima	32.05	2.00e-13	70.10
IUUC-Ogu-078056	Oryza glumaepatula	32.05	2.00e-13	70.50
IUUC-Oin-080062	Oryza indica	32.05	1.00e-13	70.90
IUUC-Olo-080869	Oryza longistaminata	32.05	1.00e-13	72.00
IUUC-Ome-081820	Oryza meridionalis	32.05	6.00e-14	72.00
IUUC-Oni-082497	Oryza nivara	24.62	1.00e-14	74.30
IUUC-Opu-083780	Oryza punctata	28.89	1.00e-12	68.90
IUUC-Oru-085091	Oryza rufipogon	32.05	1.00e-13	70.90
IUUC-Osa-085725	Oryza sativa	32.05	1.00e-13	70.90
IUUC-Ola-087033	Oryzias latipes	66.59	6.00e-164	570.00
IUUC-Oga-088861	Otolemur garnettii	70.34	1.00e-179	622.00
IUUC-Oar-090048	Ovis aries	70.55	5.00e-180	623.00
IUUC-Ptr-091658	Pan troglodytes	71.49	0.00e+00	653.00
IUUC-Pan-092873	Papio anubis	70.34	0.00e+00	646.00
IUUC-Psi-093421	Pelodiscus sinensis	87.27	0.00e+00	777.00
IUUC-Pma-094216	Petromyzon marinus	45.58	8.00e-95	340.00
IUUC-Ppa-095186	Physcomitrella patens	46.27	1.00e-09	58.20
IUUC-Pfo-096178	Poecilia formosa	67.35	1.00e-169	588.00
IUUC-Pab-098037	Pongo abelii	64.14	2.00e-142	498.00
IUUC-Pop-099334	Populus trichocarpa	30.43	7.00e-15	73.60
IUUC-Pca-100845	Procavia capensis	63.22	6.00e-164	570.00
IUUC-Pva-103203	Pteropus vampyrus	72.35	0.00e+00	663.00
IUUC-Rno-105675	Rattus norvegicus	69.11	5.00e-173	600.00
IUUC-Sha-107389	Sarcophilus harrisii	81.38	0.00e+00	719.00
IUUC-Sja-107847	Schizosaccharomyces japonicus	22.76	4.00e-15	75.50
IUUC-Sit-110421	Setaria italica	30.43	8.00e-14	70.90
IUUC-Sly-110888	Solanum lycopersicum	24.37	2.00e-13	70.50
IUUC-Sar-113185	Sorex araneus	56.48	5.00e-136	477.00
IUUC-Sbi-114182	Sorghum bicolor	42.11	2.00e-12	65.10
IUUC-Ssc-116005	Sus scrofa	72.64	0.00e+00	665.00
IUUC-Tgu-117023	Taeniopygia guttata	91.32	0.00e+00	788.00
IUUC-Tru-118221	Takifugu rubripes	66.82	4.00e-173	600.00
IUUC-Tsy-118784	Tarsius syrichta	62.37	2.00e-148	518.00
IUUC-Tni-120072	Tetraodon nigroviridis	62.96	1.00e-174	605.00
IUUC-Tca-121267	Theobroma cacao	26.21	6.00e-16	78.60
IUUC-Tae-124900	Triticum aestivum	35.06	3.00e-16	78.60
IUUC-Tur-126655	Triticum urartu	35.06	3.00e-16	79.00
IUUC-Tbe-127243	Tupaia belangeri	62.36	1.00e-154	539.00
IUUC-Ttr-129237	Tursiops truncatus	72.07	3.00e-166	577.00
IUUC-Vvi-131184	Vitis vinifera	25.75	1.00e-09	57.80
IUUC-Xtr-132006	Xenopus tropicalis	55.02	4.00e-137	480.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence