iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058472

Ensembl Protein ID

KEH37340

UniProt Accession

A0A072VGT0; A0A072VGT0_MEDTR

Genbank Protein ID

KEH37340.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g437810

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g437810	KEH37340	KEH37340

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-08	34.2	424	463

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvll 36
           gH +s t +++   +  +++ sG+ D+++++W++++g ll
   Q: 424  GHVNSHTQIQLgvdPYeRYVMSGGEDCKLRIWSIKSGELL 463
           6777788888887755799**************9999875 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MPPARELPGF YFDPEKNRYF PIKGPIPGSS SSKTKIITPR PSQPSSSQLQ EKNRSSCRKL 60
RNRTSKLLQI RELDGRHVNA SHYCKCNFTE ELRKIQTSQP AVWKYQGTNR IGISALEHLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAGTCCCG CAAACCACCA ACCTCTTAGG TCGTTCGTTT TTCTCTGGTT TGGAAGCATC 60
AAGAACATGC CACCAGCACG AGGTTAACCA ATTAACAATT TGTTCAATAC ACATATCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_2g437810

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	43.84	5.00e-45	173.00
IUUC-Aml-001929	Ailuropoda melanoleuca	28.48	1.00e-12	67.40
IUUC-Atr-002556	Amborella trichopoda	40.80	6.00e-95	340.00
IUUC-Apl-003177	Anas platyrhynchos	29.75	2.00e-12	66.60
IUUC-Aca-004610	Anolis carolinensis	25.32	3.00e-12	66.20
IUUC-Aly-005883	Arabidopsis lyrata	41.22	6.00e-97	347.00
IUUC-Ath-006668	Arabidopsis thaliana	43.47	9.00e-105	373.00
IUUC-Ame-010690	Astyanax mexicanus	31.65	1.00e-14	73.60
IUUC-Bta-012668	Bos taurus	27.85	5.00e-14	72.00
IUUC-Bdi-014848	Brachypodium distachyon	36.03	2.00e-76	278.00
IUUC-Bol-016035	Brassica oleracea	45.16	1.00e-100	359.00
IUUC-Bra-016687	Brassica rapa	43.52	7.00e-97	347.00
IUUC-Cja-019560	Callithrix jacchus	33.68	4.00e-11	60.10
IUUC-Cfa-020441	Canis familiaris	28.48	1.00e-12	67.80
IUUC-Cpo-021299	Cavia porcellus	28.32	1.00e-13	70.90
IUUC-Csa-023185	Chlorocebus sabaeus	29.75	7.00e-14	71.20
IUUC-Cho-024353	Choloepus hoffmanni	29.48	1.00e-13	70.50
IUUC-Dno-029890	Dasypus novemcinctus	30.18	3.00e-15	76.30
IUUC-Eca-033466	Equus caballus	29.75	4.00e-14	72.00
IUUC-Eeu-034995	Erinaceus europaeus	29.11	1.00e-12	66.60
IUUC-Fca-036199	Felis catus	28.48	1.00e-12	67.40
IUUC-Fal-036717	Ficedula albicollis	29.75	1.00e-12	67.80
IUUC-Gmo-039201	Gadus morhua	29.75	8.00e-13	68.20
IUUC-Gga-040398	Gallus gallus	28.48	3.00e-12	66.20
IUUC-Gac-042391	Gasterosteus aculeatus	32.28	7.00e-16	78.20
IUUC-Gma-043880	Glycine max	72.34	0.00e+00	737.00
IUUC-Ggo-045348	Gorilla gorilla	30.38	5.00e-14	72.00
IUUC-Hsa-046525	Homo sapiens	30.38	3.00e-12	65.50
IUUC-Hvu-047825	Hordeum vulgare	39.73	6.00e-78	284.00
IUUC-Itr-048472	Ictidomys tridecemlineatus	27.85	6.00e-13	68.20
IUUC-Lch-050272	Latimeria chalumnae	27.75	4.00e-14	72.00
IUUC-Lpe-051618	Leersia perrieri	36.76	1.00e-85	309.00
IUUC-Loc-051772	Lepisosteus oculatus	32.91	2.00e-16	79.70
IUUC-Laf-054577	Loxodonta africana	27.22	1.00e-12	67.40
IUUC-Mcc-055284	Macaca mulatta	29.75	1.00e-13	70.50
IUUC-Mga-059238	Meleagris gallopavo	28.48	3.00e-12	66.20
IUUC-Mmr-061642	Microcebus murinus	27.33	7.00e-12	64.30
IUUC-Mdo-062030	Monodelphis domestica	30.38	2.00e-13	69.70
IUUC-Mmu-063420	Mus musculus	28.57	1.00e-12	67.40
IUUC-Mac-065231	Musa acuminata	39.26	3.00e-90	325.00
IUUC-Mpu-065692	Mustela putorius furo	28.48	1.00e-12	67.40
IUUC-Mlu-067428	Myotis lucifugus	27.22	3.00e-12	66.20
IUUC-Nle-070145	Nomascus leucogenys	29.75	6.00e-14	71.60
IUUC-Opr-071081	Ochotona princeps	29.11	8.00e-13	67.80
IUUC-Ont-071302	Oreochromis niloticus	31.65	2.00e-15	77.00
IUUC-Ocu-073925	Oryctolagus cuniculus	30.38	3.00e-11	62.40
IUUC-Oba-075797	Oryza barthii	36.93	2.00e-87	315.00
IUUC-Obr-076014	Oryza brachyantha	37.72	1.00e-91	329.00
IUUC-Ogl-077201	Oryza glaberrima	40.21	4.00e-53	201.00
IUUC-Ogu-078056	Oryza glumaepatula	37.12	6.00e-88	317.00
IUUC-Oin-080062	Oryza indica	35.69	6.00e-80	290.00
IUUC-Olo-080869	Oryza longistaminata	35.52	2.00e-70	260.00
IUUC-Ome-081820	Oryza meridionalis	37.79	3.00e-94	338.00
IUUC-Oni-082497	Oryza nivara	35.38	2.00e-77	282.00
IUUC-Opu-083780	Oryza punctata	39.81	3.00e-37	150.00
IUUC-Oru-085091	Oryza rufipogon	37.50	7.00e-90	323.00
IUUC-Osa-085725	Oryza sativa	37.50	7.00e-90	323.00
IUUC-Ola-087033	Oryzias latipes	29.65	4.00e-15	75.50
IUUC-Oga-088861	Otolemur garnettii	29.11	2.00e-13	70.10
IUUC-Oar-090048	Ovis aries	27.22	4.00e-13	68.90
IUUC-Ptr-091658	Pan troglodytes	30.38	4.00e-14	72.40
IUUC-Pan-092570	Papio anubis	27.22	3.00e-12	65.50
IUUC-Psi-093421	Pelodiscus sinensis	30.38	4.00e-13	68.90
IUUC-Pma-094216	Petromyzon marinus	27.32	5.00e-11	61.60
IUUC-Ppa-095186	Physcomitrella patens	30.76	1.00e-52	200.00
IUUC-Pfo-096178	Poecilia formosa	25.79	3.00e-14	72.40
IUUC-Pab-098037	Pongo abelii	32.91	8.00e-13	67.40
IUUC-Pop-099334	Populus trichocarpa	60.09	8.00e-74	268.00
IUUC-Pca-100845	Procavia capensis	30.18	2.00e-13	70.10
IUUC-Pva-103203	Pteropus vampyrus	28.48	8.00e-14	71.20
IUUC-Rno-105675	Rattus norvegicus	29.11	1.00e-12	67.80
IUUC-Sha-107389	Sarcophilus harrisii	29.75	1.00e-11	63.90
IUUC-Sit-110421	Setaria italica	42.66	4.00e-59	221.00
IUUC-Sly-110888	Solanum lycopersicum	45.65	3.00e-115	407.00
IUUC-Sbi-114182	Sorghum bicolor	45.15	2.00e-40	157.00
IUUC-Ssc-116005	Sus scrofa	29.11	1.00e-13	70.90
IUUC-Tgu-117023	Taeniopygia guttata	27.85	9.00e-10	57.80
IUUC-Tru-118221	Takifugu rubripes	29.79	2.00e-15	76.30
IUUC-Tsy-118784	Tarsius syrichta	27.27	2.00e-12	66.20
IUUC-Tni-120072	Tetraodon nigroviridis	29.26	5.00e-16	78.60
IUUC-Tca-121267	Theobroma cacao	51.82	3.00e-140	491.00
IUUC-Tae-124867	Triticum aestivum	37.94	2.00e-84	305.00
IUUC-Tur-126655	Triticum urartu	43.10	1.00e-59	222.00
IUUC-Tbe-127243	Tupaia belangeri	34.74	2.00e-08	53.10
IUUC-Ttr-129237	Tursiops truncatus	28.48	5.00e-14	71.60
IUUC-Vvi-131184	Vitis vinifera	52.71	2.00e-146	511.00
IUUC-Xtr-132006	Xenopus tropicalis	30.22	2.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence