iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000014057.1	ENSSHAT00000016659.1	ENSSHAP00000016521.1
ENSSHAG00000014057.1	ENSSHAT00000016660.1	ENSSHAP00000016522.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.30e-10	40.7	473	518

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC+++g+    l++C+ C++++H +Cl ++  ++ p+   wiCpkC++
   Q: 473  DFCSVCRKSGQ----LLMCDTCSRVYHLDCLDPP-LKTIPKGM-WICPKCQD 518
           79*********....*******************.*******7.******85 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MKQDPQNADL KKQLHELQAK ITALSEKQKR VVEQLRKNLI VKQEQPDRFQ IQPLSQSENK 60
LAPAQQQPPP PPLPPLPQQQ QQQQQYHHQQ QPAAPSPNLT APSQKTVTTA SMITTKTLPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTGC AGACTCTACA GGAGGCTCTT AAAGTGGAAA TTCAGGTTCA TCAGGTAAGT 60
TCTCTTCTTG TGTATTTTTT TCTTCCAAAT ATCATTAAGT AATAGCCAAT TTTAGTACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:1990391--C:DNA repair complex
GO:0000118--C:histone deacetylase complex
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001656	Ailuropoda melanoleuca	92.03	0.00e+00	983.00
IUUC-Atr-002930	Amborella trichopoda	46.43	7.00e-10	59.70
IUUC-Apl-003874	Anas platyrhynchos	89.17	0.00e+00	1008.00
IUUC-Aca-004684	Anolis carolinensis	91.41	0.00e+00	729.00
IUUC-Ame-010638	Astyanax mexicanus	66.50	1.00e-129	457.00
IUUC-Bgr-012025	Blumeria graminis	38.89	3.00e-09	57.80
IUUC-Bta-013460	Bos taurus	90.88	0.00e+00	971.00
IUUC-Bci-013636	Botrytis cinerea	35.82	1.00e-09	59.30
IUUC-Cja-019170	Callithrix jacchus	92.06	0.00e+00	1063.00
IUUC-Cfa-020760	Canis familiaris	92.23	0.00e+00	1037.00
IUUC-Cpo-021549	Cavia porcellus	91.44	0.00e+00	990.00
IUUC-Csa-023461	Chlorocebus sabaeus	92.07	0.00e+00	966.00
IUUC-Dre-027928	Danio rerio	56.49	6.00e-146	511.00
IUUC-Dno-029450	Dasypus novemcinctus	91.24	0.00e+00	899.00
IUUC-Dor-030699	Dipodomys ordii	91.28	0.00e+00	1023.00
IUUC-Dse-031258	Dothistroma septosporum	42.31	5.00e-10	60.10
IUUC-Ete-033073	Echinops telfairi	76.98	0.00e+00	774.00
IUUC-Eca-033822	Equus caballus	90.55	0.00e+00	963.00
IUUC-Fca-035562	Felis catus	91.76	0.00e+00	1032.00
IUUC-Fal-037269	Ficedula albicollis	89.12	0.00e+00	1021.00
IUUC-Gmo-038592	Gadus morhua	56.03	2.00e-122	432.00
IUUC-Gga-040795	Gallus gallus	89.12	0.00e+00	1020.00
IUUC-Gac-042224	Gasterosteus aculeatus	59.20	2.00e-163	568.00
IUUC-Ggo-045327	Gorilla gorilla	91.92	0.00e+00	1061.00
IUUC-Hsa-046675	Homo sapiens	92.06	0.00e+00	1065.00
IUUC-Itr-048946	Ictidomys tridecemlineatus	94.52	0.00e+00	632.00
IUUC-Lch-050609	Latimeria chalumnae	73.27	0.00e+00	734.00
IUUC-Loc-052407	Lepisosteus oculatus	75.34	0.00e+00	671.00
IUUC-Laf-053876	Loxodonta africana	91.21	0.00e+00	972.00
IUUC-Mcc-054954	Macaca mulatta	88.80	0.00e+00	1013.00
IUUC-Meu-056821	Macropus eugenii	85.58	0.00e+00	981.00
IUUC-Mtr-058324	Medicago truncatula	40.58	1.00e-10	61.60
IUUC-Mga-059320	Meleagris gallopavo	89.26	0.00e+00	1023.00
IUUC-Mmr-061278	Microcebus murinus	87.07	0.00e+00	976.00
IUUC-Mdo-062891	Monodelphis domestica	95.10	0.00e+00	1055.00
IUUC-Mmu-063907	Mus musculus	89.72	0.00e+00	999.00
IUUC-Mac-065599	Musa acuminata	39.44	3.00e-11	63.90
IUUC-Mpu-065839	Mustela putorius furo	90.65	0.00e+00	1019.00
IUUC-Mlu-068142	Myotis lucifugus	91.59	0.00e+00	1031.00
IUUC-Ncr-068727	Neurospora crassa	42.86	4.00e-11	64.30
IUUC-Nle-069423	Nomascus leucogenys	91.60	0.00e+00	1058.00
IUUC-Opr-070236	Ochotona princeps	85.58	0.00e+00	793.00
IUUC-Ont-071327	Oreochromis niloticus	59.49	5.00e-127	448.00
IUUC-Oan-073405	Ornithorhynchus anatinus	96.35	0.00e+00	942.00
IUUC-Ocu-074391	Oryctolagus cuniculus	90.97	0.00e+00	1016.00
IUUC-Ola-086548	Oryzias latipes	56.56	4.00e-163	568.00
IUUC-Oga-088488	Otolemur garnettii	92.23	0.00e+00	1038.00
IUUC-Oar-090334	Ovis aries	90.65	0.00e+00	1024.00
IUUC-Ptr-091018	Pan troglodytes	92.06	0.00e+00	1065.00
IUUC-Psi-093596	Pelodiscus sinensis	92.97	0.00e+00	889.00
IUUC-Pma-094616	Petromyzon marinus	64.03	4.00e-100	357.00
IUUC-Pfo-097233	Poecilia formosa	61.16	9.00e-134	470.00
IUUC-Pab-097801	Pongo abelii	91.92	0.00e+00	1061.00
IUUC-Pop-099691	Populus trichocarpa	44.93	1.00e-11	65.10
IUUC-Ppe-101956	Prunus persica	47.83	3.00e-13	70.50
IUUC-Pva-102419	Pteropus vampyrus	92.08	0.00e+00	1036.00
IUUC-Rno-104900	Rattus norvegicus	90.92	0.00e+00	1021.00
IUUC-Sar-113573	Sorex araneus	95.88	0.00e+00	721.00
IUUC-Ssc-115924	Sus scrofa	95.63	0.00e+00	924.00
IUUC-Tgu-117422	Taeniopygia guttata	89.26	0.00e+00	1025.00
IUUC-Tru-118697	Takifugu rubripes	59.05	2.00e-125	442.00
IUUC-Tsy-119092	Tarsius syrichta	95.24	7.00e-166	577.00
IUUC-Tni-120185	Tetraodon nigroviridis	61.75	2.00e-129	456.00
IUUC-Tca-121730	Theobroma cacao	43.48	1.00e-10	62.40
IUUC-Ttr-128860	Tursiops truncatus	90.81	0.00e+00	1023.00
IUUC-Vpa-130333	Vicugna pacos	85.26	0.00e+00	985.00
IUUC-Xtr-131763	Xenopus tropicalis	75.04	0.00e+00	697.00
IUUC-Xma-134282	Xiphophorus maculatus	76.03	4.00e-101	362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence