iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Uma-129521

Ensembl Protein ID

KIS71882

UniProt Accession

Q4PHV3; A0A0D1CFV0; IPI3_USTMA

Genbank Protein ID

KIS71882.1

Protein Name

Pre-rRNA-processing protein IPI3

Genbank Nucleotide ID

CM003140

Gene Name

IPI3; UMAG_00310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
UMAG_00310	KIS71882	KIS71882

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-11	42.5	204	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.....sd.tllvsGsdDgtikvWDlrtgvl 35
           H+  +t+l+      +   +++s+s D ++k+WDlrt  l
   Q: 204  HNLAITDLDIssgrfPHqAMVLSSSSDASVKLWDLRTRSL 243
           555677777766666555679**************99766 PP

Organism

Ustilago maydis

Functional Description
(View)

Involved inthe processing of ITS2 sequences from 35S pre-rRNA.

Protein Sequence
(Fasta)

MASSSSAASL FATECLLYST ASSSTLVGSM GLTTVAAPSS TSALFTFKGV SDPAFHSVTV 60
IPTSPNPAIS GTGGLIFQLE SNKAALNIFS WQRDHLLQRI ILPSKLSCIA CSPNGDLVAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCTT CCTCCTCGGC TGCGTCGTTG TTCGCGACAG AGTGCCTTCT TTACTCGACC 60
GCATCCTCAT CAACTCTTGT GGGATCCATG GGCCTCACAA CAGTCGCAGC TCCTTCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006364--P:rRNA processing

KEGG

uma:UMAG_00310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001040	Aegilops tauschii	27.13	9.00e-17	79.30
IUUC-Aml-001819	Ailuropoda melanoleuca	24.71	1.00e-15	75.90
IUUC-Atr-002688	Amborella trichopoda	33.00	1.00e-22	99.40
IUUC-Apl-004023	Anas platyrhynchos	29.31	2.00e-14	71.20
IUUC-Aly-006061	Arabidopsis lyrata	32.42	3.00e-22	97.80
IUUC-Ath-007111	Arabidopsis thaliana	32.64	5.00e-22	97.10
IUUC-Acl-008357	Aspergillus clavatus	28.70	9.00e-18	83.60
IUUC-Afl-008564	Aspergillus flavus	26.57	5.00e-19	87.40
IUUC-Afu-009113	Aspergillus fumigatus	29.17	8.00e-20	90.10
IUUC-Ani-009132	Aspergillus nidulans	27.83	3.00e-21	94.70
IUUC-Ang-009586	Aspergillus niger	28.09	1.00e-21	95.50
IUUC-Aor-009882	Aspergillus oryzae	25.53	7.00e-20	90.50
IUUC-Ate-010249	Aspergillus terreus	30.04	3.00e-21	94.70
IUUC-Ame-010912	Astyanax mexicanus	24.30	4.00e-27	114.00
IUUC-Bgr-012242	Blumeria graminis	27.12	2.00e-11	62.00
IUUC-Bta-013402	Bos taurus	26.76	5.00e-21	94.00
IUUC-Bci-013791	Botrytis cinerea	25.52	1.00e-13	69.30
IUUC-Bdi-015054	Brachypodium distachyon	27.32	1.00e-16	79.00
IUUC-Bol-016342	Brassica oleracea	32.93	1.00e-20	92.80
IUUC-Bra-016967	Brassica rapa	34.15	8.00e-22	96.30
IUUC-Cja-019758	Callithrix jacchus	26.06	7.00e-22	96.70
IUUC-Cfa-020495	Canis familiaris	27.41	2.00e-21	94.70
IUUC-Cpo-021438	Cavia porcellus	26.05	5.00e-25	106.00
IUUC-Csa-023416	Chlorocebus sabaeus	25.50	1.00e-20	92.40
IUUC-Csv-025918	Ciona savignyi	24.84	8.00e-17	79.70
IUUC-Cgl-026618	Colletotrichum gloeosporioides	29.49	9.00e-20	89.70
IUUC-Cne-026843	Cryptococcus neoformans	31.49	2.00e-34	138.00
IUUC-Cme-027256	Cyanidioschyzon merolae	30.00	1.00e-09	56.60
IUUC-Dre-027560	Danio rerio	23.87	1.00e-24	105.00
IUUC-Dno-029315	Dasypus novemcinctus	32.66	4.00e-24	103.00
IUUC-Dor-030935	Dipodomys ordii	31.66	2.00e-22	98.60
IUUC-Dse-031492	Dothistroma septosporum	23.79	9.00e-14	70.10
IUUC-Dme-032059	Drosophila melanogaster	23.77	2.00e-20	92.00
IUUC-Fca-036068	Felis catus	26.06	8.00e-17	79.70
IUUC-Fal-037467	Ficedula albicollis	32.66	2.00e-22	97.80
IUUC-Fox-037903	Fusarium oxysporum	29.19	3.00e-19	87.80
IUUC-Fso-038214	Fusarium solani	30.41	2.00e-12	64.70
IUUC-Gmo-039323	Gadus morhua	35.47	2.00e-15	75.50
IUUC-Ggr-040050	Gaeumannomyces graminis	29.31	9.00e-14	69.70
IUUC-Gga-040563	Gallus gallus	24.78	2.00e-18	85.10
IUUC-Gac-042641	Gasterosteus aculeatus	28.17	8.00e-21	93.20
IUUC-Gma-043856	Glycine max	30.52	7.00e-21	93.20
IUUC-Ggo-045137	Gorilla gorilla	25.21	1.00e-16	79.00
IUUC-Hsa-046335	Homo sapiens	25.14	2.00e-16	78.60
IUUC-Hvu-047685	Hordeum vulgare	27.66	7.00e-18	83.20
IUUC-Itr-048032	Ictidomys tridecemlineatus	26.18	5.00e-25	106.00
IUUC-Kpa-049129	Komagataella pastoris	29.70	8.00e-26	109.00
IUUC-Lch-049532	Latimeria chalumnae	30.52	1.00e-24	105.00
IUUC-Lpe-051321	Leersia perrieri	27.32	5.00e-16	77.00
IUUC-Loc-052471	Lepisosteus oculatus	23.63	4.00e-16	77.40
IUUC-Lma-053091	Leptosphaeria maculans	27.55	1.00e-18	86.30
IUUC-Laf-054331	Loxodonta africana	25.89	1.00e-17	82.40
IUUC-Mcc-055803	Macaca mulatta	25.50	1.00e-20	92.40
IUUC-Meu-056090	Macropus eugenii	27.06	7.00e-26	109.00
IUUC-Mor-057160	Magnaporthe oryzae	30.40	1.00e-17	82.80
IUUC-Mtr-058800	Medicago truncatula	33.33	1.00e-21	95.90
IUUC-Mla-058943	Melampsora laricipopulina	26.94	5.00e-37	147.00
IUUC-Mga-059282	Meleagris gallopavo	31.19	1.00e-20	92.40
IUUC-Mvi-060315	Microbotryum violaceum	38.92	1.00e-38	152.00
IUUC-Mmr-061127	Microcebus murinus	25.66	7.00e-20	89.70
IUUC-Mdo-062350	Monodelphis domestica	26.18	2.00e-24	105.00
IUUC-Mmu-063706	Mus musculus	26.20	4.00e-24	103.00
IUUC-Mpu-066711	Mustela putorius furo	28.44	1.00e-24	105.00
IUUC-Mlu-068121	Myotis lucifugus	23.94	3.00e-20	90.90
IUUC-Nfi-068454	Neosartorya fischeri	28.70	4.00e-19	87.80
IUUC-Ncr-068914	Neurospora crassa	28.16	4.00e-15	73.90
IUUC-Nle-069518	Nomascus leucogenys	26.18	3.00e-21	94.40
IUUC-Ont-071435	Oreochromis niloticus	32.27	2.00e-26	112.00
IUUC-Oba-075873	Oryza barthii	28.34	1.00e-17	82.40
IUUC-Ogl-077840	Oryza glaberrima	28.34	8.00e-18	83.20
IUUC-Ogu-077988	Oryza glumaepatula	28.34	1.00e-17	82.40
IUUC-Olo-080415	Oryza longistaminata	28.34	1.00e-17	83.20
IUUC-Ome-081952	Oryza meridionalis	28.88	1.00e-18	85.90
IUUC-Oni-082300	Oryza nivara	28.34	1.00e-17	82.40
IUUC-Oru-085164	Oryza rufipogon	28.34	1.00e-17	82.40
IUUC-Osa-086129	Oryza sativa	28.34	7.00e-18	83.20
IUUC-Ola-086571	Oryzias latipes	26.09	2.00e-25	108.00
IUUC-Oga-088561	Otolemur garnettii	25.50	2.00e-19	88.60
IUUC-Oar-090131	Ovis aries	26.41	3.00e-18	84.70
IUUC-Ptr-091301	Pan troglodytes	25.37	6.00e-15	73.20
IUUC-Pan-092810	Papio anubis	25.88	9.00e-21	92.80
IUUC-Psi-093091	Pelodiscus sinensis	23.40	5.00e-16	77.00
IUUC-Ppa-095317	Physcomitrella patens	33.95	7.00e-14	70.10
IUUC-Pfo-096996	Poecilia formosa	29.76	3.00e-23	101.00
IUUC-Pab-097747	Pongo abelii	26.70	3.00e-21	94.40
IUUC-Pop-099609	Populus trichocarpa	31.96	5.00e-22	97.10
IUUC-Pca-100972	Procavia capensis	33.33	3.00e-15	74.70
IUUC-Ppe-101442	Prunus persica	34.78	5.00e-17	80.50
IUUC-Pva-102700	Pteropus vampyrus	30.66	4.00e-14	70.90
IUUC-Pgr-103616	Puccinia graminis	40.57	1.00e-28	119.00
IUUC-Ptt-103954	Puccinia triticina	35.24	5.00e-27	114.00
IUUC-Pte-104120	Pyrenophora teres	26.04	1.00e-16	79.30
IUUC-Pyt-104558	Pyrenophora triticirepentis	26.04	4.00e-17	80.90
IUUC-Rno-104933	Rattus norvegicus	26.13	2.00e-25	108.00
IUUC-Sce-106403	Saccharomyces cerevisiae	23.59	2.00e-24	105.00
IUUC-Sha-107636	Sarcophilus harrisii	26.47	2.00e-26	111.00
IUUC-Sja-107783	Schizosaccharomyces japonicus	35.26	1.00e-27	115.00
IUUC-Spo-108192	Schizosaccharomyces pombe	26.90	5.00e-26	110.00
IUUC-Ssl-108384	Sclerotinia sclerotiorum	27.95	1.00e-15	75.90
IUUC-Smo-109066	Selaginella moellendorffii	24.79	4.00e-19	87.40
IUUC-Sit-110770	Setaria italica	27.13	1.00e-16	79.00
IUUC-Sly-111453	Solanum lycopersicum	28.77	1.00e-22	99.00
IUUC-Stu-112384	Solanum tuberosum	29.25	8.00e-23	100.00
IUUC-Sbi-113952	Sorghum bicolor	26.60	2.00e-16	78.20
IUUC-Sre-115223	Sporisorium reilianum	83.16	0.00e+00	882.00
IUUC-Ssc-115627	Sus scrofa	26.76	8.00e-21	93.20
IUUC-Tgu-117404	Taeniopygia guttata	31.41	2.00e-21	94.40
IUUC-Tru-117629	Takifugu rubripes	29.88	1.00e-23	102.00
IUUC-Tni-119839	Tetraodon nigroviridis	30.66	2.00e-18	85.10
IUUC-Tca-121766	Theobroma cacao	28.80	4.00e-19	87.40
IUUC-Tre-122047	Trichoderma reesei	28.30	1.00e-19	89.00
IUUC-Tvi-122668	Trichoderma virens	26.89	1.00e-18	85.50
IUUC-Tae-125742	Triticum aestivum	27.66	3.00e-17	80.90
IUUC-Tme-127070	Tuber melanosporum	28.70	8.00e-22	96.70
IUUC-Ttr-128735	Tursiops truncatus	33.02	5.00e-20	90.10
IUUC-Vvi-130872	Vitis vinifera	32.75	3.00e-20	91.30
IUUC-Xtr-131838	Xenopus tropicalis	24.38	8.00e-25	106.00
IUUC-Xma-134106	Xiphophorus maculatus	29.76	4.00e-23	100.00
IUUC-Yli-134551	Yarrowia lipolytica	38.69	7.00e-23	99.80
IUUC-Zma-134703	Zea mays	27.78	3.00e-17	81.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence