iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-073953

UUCD1 version

UUC-OrC-00861

Ensembl Protein ID

ENSOCUP00000023867.1

UniProt Accession

G1U3A7; G1U3A7_RABIT

Protein Name

Uncharacterized protein

Gene Name

STRN4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000021418.1	ENSOCUT00000022955.1	ENSOCUP00000023867.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-29	99.3	384	414
UBD/Beta-Prp	2.00e-48	165.1	431	593

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH d v++laf +   +l+s+s Dgt++vWD
   Q: 384  GHGDAVWGLAFsPAsQRLASCSADGTVRVWD 414
           8**********944599************** PP

UBD/Beta-Prp

   S: 10   ksvitcvkf.spdksllatgsrdgtikvwdvttgkllrsl.sgheae...vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
            +v t+v+f s +  ++++++r+g + ++d++tg++l +l s  +++   +++v  +p++++ +t+++Dr i+  d +tgk vh++ +h
   Q: 431  HDVPTSVAFtSTEPAHIVAAFRSGDTVLYDLETGSALLTLeSRGSSGptqINQVVSHPSQPLSITAHDDRGIRFLDNRTGKSVHSMVAH 519
           579999***999999*********************88885444444566*************************************** PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
            d v++l+++p+g +l sGshd  +r+w l++++c++e     ++h++++  v+ hp++ l++s+++D   +++
   Q: 520  LDAVTCLAVDPNGVFLMSGSHDCSLRLWSLDNKTCVQEitaHRKKHEEAIHAVACHPSKALIASAGADALAKVF 593
           **************************************999999************************988887 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

VSNGPVESVT LENSPLAWKE GRQLLRQYLE EVGYTDTILD MRSKRVRSLL GRSLELNGAV 60
EPSLSGGESL LVKQIEEQIQ RNAAGKDGRE RLAGSVLEQI PFLQSCEDED SDEDDELGGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTCCAATG GCCCCGTGGA GTCGGTCACC CTGGAGAACA GCCCGCTGGC GTGGAAGGAG 60
GGGCGGCAGC TTCTCCGACA GTGAGTGTGC GGCGGGGGGC AGGCCGCCGG GGACCAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001946	Ailuropoda melanoleuca	77.95	0.00e+00	858.00
IUUC-Aca-004552	Anolis carolinensis	75.24	0.00e+00	810.00
IUUC-Acl-008170	Aspergillus clavatus	26.39	2.00e-27	117.00
IUUC-Ate-010457	Aspergillus terreus	26.15	3.00e-27	117.00
IUUC-Ame-010825	Astyanax mexicanus	52.51	1.00e-158	553.00
IUUC-Bta-012550	Bos taurus	89.82	0.00e+00	908.00
IUUC-Cja-018978	Callithrix jacchus	87.95	0.00e+00	793.00
IUUC-Cfa-020268	Canis familiaris	90.10	0.00e+00	897.00
IUUC-Cpo-022102	Cavia porcellus	91.09	0.00e+00	926.00
IUUC-Csa-023969	Chlorocebus sabaeus	92.26	0.00e+00	965.00
IUUC-Dre-027638	Danio rerio	57.03	0.00e+00	654.00
IUUC-Dno-029256	Dasypus novemcinctus	93.97	0.00e+00	629.00
IUUC-Dor-031032	Dipodomys ordii	90.12	0.00e+00	927.00
IUUC-Ete-033031	Echinops telfairi	77.78	8.00e-154	537.00
IUUC-Eca-033515	Equus caballus	89.79	0.00e+00	941.00
IUUC-Eeu-035033	Erinaceus europaeus	78.03	2.00e-119	422.00
IUUC-Fca-035749	Felis catus	88.16	0.00e+00	895.00
IUUC-Gmo-039274	Gadus morhua	59.35	1.00e-179	622.00
IUUC-Gac-042099	Gasterosteus aculeatus	61.65	2.00e-151	529.00
IUUC-Ggo-045406	Gorilla gorilla	90.77	0.00e+00	941.00
IUUC-Hsa-046341	Homo sapiens	90.77	0.00e+00	943.00
IUUC-Itr-048200	Ictidomys tridecemlineatus	90.61	0.00e+00	950.00
IUUC-Lch-049604	Latimeria chalumnae	58.50	0.00e+00	628.00
IUUC-Loc-052671	Lepisosteus oculatus	57.85	0.00e+00	656.00
IUUC-Laf-054531	Loxodonta africana	91.43	0.00e+00	926.00
IUUC-Mcc-055737	Macaca mulatta	91.00	0.00e+00	912.00
IUUC-Meu-056845	Macropus eugenii	85.00	0.00e+00	875.00
IUUC-Mmr-061153	Microcebus murinus	91.93	0.00e+00	968.00
IUUC-Mdo-062739	Monodelphis domestica	80.78	0.00e+00	822.00
IUUC-Mmu-063564	Mus musculus	91.27	0.00e+00	947.00
IUUC-Mpu-065794	Mustela putorius furo	88.32	0.00e+00	864.00
IUUC-Nfi-068560	Neosartorya fischeri	25.91	9.00e-27	115.00
IUUC-Nle-069587	Nomascus leucogenys	83.14	0.00e+00	822.00
IUUC-Opr-071219	Ochotona princeps	74.05	0.00e+00	661.00
IUUC-Ola-086888	Oryzias latipes	61.58	6.00e-150	524.00
IUUC-Oga-088280	Otolemur garnettii	91.93	0.00e+00	970.00
IUUC-Oar-090381	Ovis aries	87.03	0.00e+00	840.00
IUUC-Ptr-090704	Pan troglodytes	87.48	0.00e+00	880.00
IUUC-Pan-092058	Papio anubis	92.26	0.00e+00	965.00
IUUC-Psi-093535	Pelodiscus sinensis	70.41	4.00e-176	610.00
IUUC-Pfo-096556	Poecilia formosa	56.96	0.00e+00	627.00
IUUC-Pab-098573	Pongo abelii	90.61	0.00e+00	942.00
IUUC-Pca-100746	Procavia capensis	85.34	0.00e+00	850.00
IUUC-Pva-102823	Pteropus vampyrus	89.83	0.00e+00	939.00
IUUC-Rno-105418	Rattus norvegicus	90.77	0.00e+00	941.00
IUUC-Ssc-116050	Sus scrofa	89.07	0.00e+00	845.00
IUUC-Tru-117971	Takifugu rubripes	58.25	0.00e+00	642.00
IUUC-Tni-120522	Tetraodon nigroviridis	59.35	0.00e+00	657.00
IUUC-Tbe-128127	Tupaia belangeri	93.77	2.00e-175	608.00
IUUC-Ttr-128911	Tursiops truncatus	82.54	0.00e+00	853.00
IUUC-Vda-129673	Verticillium dahliae	25.84	4.00e-26	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence