iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121103

Ensembl Protein ID

EOX99002

UniProt Accession

A0A061E9N6; A0A061E9N6_THECC

Genbank Protein ID

EOX99001.1; EOX99002.1; EOX99003.1

Protein Name

Transducin family protein / WD-40 repeat family protein isoform 1

Genbank Nucleotide ID

CM001880; CM001880; CM001880

Gene Name

TCM_007644

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_007644	EOX99002	EOX99002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-22	77.2	527	563
UBD/Beta-Prp	2.50e-45	155.8	263	457

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           gH++ v+c+++   + ++l+s+sdD ti++W l+ ++
   Q: 527  GHSGAVNCVSWnpANlHMLASASDDRTIRIWGLDHFN 563
           8**********9865799*************997766 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
           ++l+ l+ h++ev+ ++fs++gk+l+++s+D+++ +w+++   +g+  htl gh++ vl++s+sp+++ +++ ++ + ir wd+++g+cl+  ++   g++
   Q: 263  QTLQILQAHNDEVWFLQFSHNGKYLASSSKDQLAIIWEFNengQGSLKHTLCGHQKPVLTVSWSPDDSQILTCGQEEGIRRWDVSSGECLHVYEKSGVGLI 363
           45899********************************8888889***********************************************8888889999 PP
   S: 141  ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlv 238
           +c  +++ g+ +++G++Dr + lWd+  g+ l+ ++g+ t ++  ++++++gk+++s+ + + + l d +++   ++l++  d ++s  +s+++++l+
   Q: 364  SCGWFPD-GRGIFAGMTDRSICLWDM-DGRELECWKGQRTLKISDMAVTDDGKRIISICRESAILLLDREAK--FERLIEEVDMITSFSLSKDNKFLL 457
           9998876.9*****************.99999************************************9888..899999999999999999998876 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGVIEDTEPP LKRVKGPLDE SKSSPEDRLT AEPVSCSLGA QMARPLTSQG DGETIGSKGV 60
IKKAEFIKLI TRALYSLGYD KSGALLEEES GIPLHSPVVN LFMQQVTDGK WDDSVATLHM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGTGA TAGAAGATAC CGAACCACCC TTGAAACGTG TGAAAGGGCC CTTGGACGAA 60
TCAAAGAGCT CGCCAGAGGA TCGTTTGACT GCAGAACCTG TTTCTTGCTC TTTGGGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000905	Aegilops tauschii	62.64	0.00e+00	702.00
IUUC-Aml-001381	Ailuropoda melanoleuca	35.71	2.00e-78	285.00
IUUC-Atr-002649	Amborella trichopoda	62.65	0.00e+00	749.00
IUUC-Apl-003200	Anas platyrhynchos	36.25	4.00e-76	277.00
IUUC-Aca-005122	Anolis carolinensis	36.86	3.00e-79	288.00
IUUC-Aly-006260	Arabidopsis lyrata	69.11	0.00e+00	809.00
IUUC-Ath-007549	Arabidopsis thaliana	67.69	0.00e+00	787.00
IUUC-Ago-007896	Ashbya gossypii	22.57	2.00e-30	127.00
IUUC-Acl-008259	Aspergillus clavatus	35.06	9.00e-85	306.00
IUUC-Afl-008669	Aspergillus flavus	33.45	1.00e-79	290.00
IUUC-Afu-008972	Aspergillus fumigatus	36.68	8.00e-64	236.00
IUUC-Ang-009832	Aspergillus niger	31.97	2.00e-70	259.00
IUUC-Aor-010221	Aspergillus oryzae	34.58	4.00e-83	301.00
IUUC-Ate-010262	Aspergillus terreus	33.58	2.00e-84	306.00
IUUC-Ame-010615	Astyanax mexicanus	34.34	7.00e-75	274.00
IUUC-Bgr-012047	Blumeria graminis	31.85	2.00e-66	246.00
IUUC-Bta-012566	Bos taurus	35.76	5.00e-75	274.00
IUUC-Bci-013589	Botrytis cinerea	29.92	8.00e-71	260.00
IUUC-Bdi-014338	Brachypodium distachyon	61.05	0.00e+00	720.00
IUUC-Bol-015143	Brassica oleracea	68.37	0.00e+00	787.00
IUUC-Bra-017245	Brassica rapa	67.63	0.00e+00	783.00
IUUC-Cja-019082	Callithrix jacchus	35.53	3.00e-78	285.00
IUUC-Cfa-020788	Canis familiaris	35.56	1.00e-74	273.00
IUUC-Cpo-022453	Cavia porcellus	36.13	5.00e-76	277.00
IUUC-Csa-023815	Chlorocebus sabaeus	33.99	6.00e-59	221.00
IUUC-Csv-026251	Ciona savignyi	40.35	4.00e-82	298.00
IUUC-Cne-026805	Cryptococcus neoformans	26.44	3.00e-48	186.00
IUUC-Cme-027218	Cyanidioschyzon merolae	28.66	2.00e-60	226.00
IUUC-Dre-027404	Danio rerio	35.29	2.00e-75	275.00
IUUC-Dno-029089	Dasypus novemcinctus	35.17	7.00e-77	280.00
IUUC-Dor-030714	Dipodomys ordii	33.64	4.00e-53	201.00
IUUC-Dse-031569	Dothistroma septosporum	27.85	2.00e-64	239.00
IUUC-Dme-032077	Drosophila melanogaster	37.06	3.00e-82	298.00
IUUC-Eca-033943	Equus caballus	35.94	8.00e-76	276.00
IUUC-Fca-036556	Felis catus	35.69	8.00e-71	260.00
IUUC-Fal-036639	Ficedula albicollis	35.20	4.00e-77	281.00
IUUC-Fox-037720	Fusarium oxysporum	30.36	3.00e-65	241.00
IUUC-Fso-038206	Fusarium solani	30.59	1.00e-64	239.00
IUUC-Gmo-038610	Gadus morhua	33.02	2.00e-77	282.00
IUUC-Ggr-039738	Gaeumannomyces graminis	30.84	2.00e-67	249.00
IUUC-Gga-040577	Gallus gallus	36.02	1.00e-79	290.00
IUUC-Gac-041352	Gasterosteus aculeatus	33.97	3.00e-77	281.00
IUUC-Ggo-044684	Gorilla gorilla	35.53	3.00e-78	285.00
IUUC-Hsa-046838	Homo sapiens	35.53	3.00e-78	285.00
IUUC-Hvu-047610	Hordeum vulgare	60.54	0.00e+00	724.00
IUUC-Itr-048020	Ictidomys tridecemlineatus	35.53	4.00e-78	285.00
IUUC-Lch-049848	Latimeria chalumnae	34.77	3.00e-61	228.00
IUUC-Lpe-050963	Leersia perrieri	63.47	0.00e+00	763.00
IUUC-Loc-052708	Lepisosteus oculatus	36.67	8.00e-80	290.00
IUUC-Lma-053156	Leptosphaeria maculans	31.91	1.00e-71	263.00
IUUC-Laf-054153	Loxodonta africana	35.40	7.00e-78	284.00
IUUC-Mcc-054742	Macaca mulatta	35.53	3.00e-78	285.00
IUUC-Mor-056939	Magnaporthe oryzae	33.08	5.00e-78	284.00
IUUC-Mpo-057600	Magnaporthe poae	29.96	4.00e-65	242.00
IUUC-Mla-058912	Melampsora laricipopulina	36.30	1.00e-79	289.00
IUUC-Mga-059811	Meleagris gallopavo	34.50	6.00e-64	237.00
IUUC-Mvi-060274	Microbotryum violaceum	34.31	9.00e-84	304.00
IUUC-Mmr-060823	Microcebus murinus	35.71	2.00e-78	286.00
IUUC-Mdo-062394	Monodelphis domestica	36.35	9.00e-79	287.00
IUUC-Mmu-063924	Mus musculus	35.53	1.00e-78	286.00
IUUC-Mac-065563	Musa acuminata	66.90	0.00e+00	790.00
IUUC-Mpu-066858	Mustela putorius furo	36.23	4.00e-76	278.00
IUUC-Mlu-067659	Myotis lucifugus	35.71	2.00e-78	285.00
IUUC-Nfi-068498	Neosartorya fischeri	34.01	4.00e-82	298.00
IUUC-Ncr-068832	Neurospora crassa	28.52	5.00e-60	224.00
IUUC-Nle-069654	Nomascus leucogenys	35.56	1.00e-74	273.00
IUUC-Ont-071547	Oreochromis niloticus	35.49	4.00e-81	295.00
IUUC-Oan-073045	Ornithorhynchus anatinus	33.58	8.00e-69	254.00
IUUC-Ocu-073812	Oryctolagus cuniculus	34.77	7.00e-77	280.00
IUUC-Oba-075071	Oryza barthii	63.30	0.00e+00	766.00
IUUC-Obr-076614	Oryza brachyantha	62.63	0.00e+00	746.00
IUUC-Ogl-076963	Oryza glaberrima	65.46	0.00e+00	748.00
IUUC-Ogu-078436	Oryza glumaepatula	65.46	0.00e+00	748.00
IUUC-Oin-080021	Oryza indica	65.28	0.00e+00	745.00
IUUC-Olo-080298	Oryza longistaminata	65.28	0.00e+00	746.00
IUUC-Ome-081202	Oryza meridionalis	63.13	0.00e+00	763.00
IUUC-Oni-082604	Oryza nivara	63.13	0.00e+00	763.00
IUUC-Opu-083763	Oryza punctata	63.13	0.00e+00	763.00
IUUC-Oru-084243	Oryza rufipogon	63.13	0.00e+00	763.00
IUUC-Osa-086153	Oryza sativa	63.87	0.00e+00	661.00
IUUC-Ola-086670	Oryzias latipes	34.03	4.00e-80	291.00
IUUC-Oga-088723	Otolemur garnettii	34.57	2.00e-71	262.00
IUUC-Oar-090125	Ovis aries	35.71	2.00e-78	286.00
IUUC-Ptr-090787	Pan troglodytes	35.56	1.00e-74	273.00
IUUC-Pan-092573	Papio anubis	33.33	2.00e-36	145.00
IUUC-Psi-093579	Pelodiscus sinensis	36.55	9.00e-75	273.00
IUUC-Pma-094254	Petromyzon marinus	39.47	3.00e-73	267.00
IUUC-Pno-094912	Phaeosphaeria nodorum	32.96	1.00e-75	276.00
IUUC-Ppa-095307	Physcomitrella patens	53.11	3.00e-162	564.00
IUUC-Pfo-096394	Poecilia formosa	35.69	9.00e-82	296.00
IUUC-Pab-098459	Pongo abelii	35.34	3.00e-76	278.00
IUUC-Ppe-101227	Prunus persica	77.26	0.00e+00	913.00
IUUC-Pva-102404	Pteropus vampyrus	33.40	2.00e-64	238.00
IUUC-Ptt-103705	Puccinia triticina	26.82	6.00e-39	155.00
IUUC-Pte-104023	Pyrenophora teres	33.21	3.00e-75	275.00
IUUC-Pyt-104759	Pyrenophora triticirepentis	32.10	7.00e-74	271.00
IUUC-Rno-105335	Rattus norvegicus	35.36	2.00e-74	272.00
IUUC-Sha-106497	Sarcophilus harrisii	36.13	1.00e-75	276.00
IUUC-Sja-107894	Schizosaccharomyces japonicus	35.03	9.00e-82	296.00
IUUC-Spo-108235	Schizosaccharomyces pombe	34.06	8.00e-77	280.00
IUUC-Smo-109054	Selaginella moellendorffii	54.02	3.00e-167	580.00
IUUC-Sit-110575	Setaria italica	61.60	0.00e+00	746.00
IUUC-Sbi-114344	Sorghum bicolor	61.94	0.00e+00	748.00
IUUC-Sre-115051	Sporisorium reilianum	26.54	5.00e-39	155.00
IUUC-Ssc-115532	Sus scrofa	35.34	4.00e-78	285.00
IUUC-Tgu-116728	Taeniopygia guttata	36.02	1.00e-78	286.00
IUUC-Tru-118471	Takifugu rubripes	36.00	2.00e-83	302.00
IUUC-Tsy-119284	Tarsius syrichta	30.49	9.00e-60	223.00
IUUC-Tni-119720	Tetraodon nigroviridis	33.97	1.00e-80	292.00
IUUC-Tre-122234	Trichoderma reesei	31.38	1.00e-64	240.00
IUUC-Tae-125720	Triticum aestivum	60.50	0.00e+00	720.00
IUUC-Tur-126726	Triticum urartu	58.77	0.00e+00	705.00
IUUC-Tme-126972	Tuber melanosporum	37.60	2.00e-95	342.00
IUUC-Ttr-129184	Tursiops truncatus	33.99	3.00e-68	251.00
IUUC-Uma-129354	Ustilago maydis	30.67	4.00e-35	142.00
IUUC-Vpa-130400	Vicugna pacos	35.76	3.00e-74	271.00
IUUC-Vvi-130991	Vitis vinifera	72.01	0.00e+00	822.00
IUUC-Xtr-132619	Xenopus tropicalis	35.09	2.00e-75	276.00
IUUC-Xma-134128	Xiphophorus maculatus	35.69	7.00e-82	297.00
IUUC-Yli-134521	Yarrowia lipolytica	35.37	1.00e-79	290.00
IUUC-Zma-135772	Zea mays	62.92	0.00e+00	719.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence