iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114318

UUCD1 version

UUC-SoB-00056

Ensembl Protein ID

Sb08g000280.1

UniProt Accession

A0A1B6PAW2; A0A1B6PAW2_SORBI

Genbank Protein ID

KXG22747.1; KXG22748.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767; CM000767

Gene Name

SORBI_008G001200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g000280	Sb08g000280.1	Sb08g000280.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	37.50	5.00e-50	194.00	IUUC-Sce-106312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSDDGDRTCP LCAEEMDITD QQLKPCKCGY DICVWCWHHI IDMAEKEETE GRCPACRTRY 60
DKDRIVKMAA TCDRTVAEKN AEKKHKTQKV KPKAAPPPTA MSTVESKKHL ASVRVIQRNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGACG ATGGTGACCG CACCTGCCCG CTCTGTGCCG AGGAGATGGA CATCACTGAC 60
CAGCAGCTCA AGCCATGCAA ATGCGGCTAC GACGTATGTC TACCCATCAT CCTCCTATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0694--RNA-binding

Interpro

IPR034261--CNOT4_RRM
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50102--RRM
PS50089--ZF_RING_2

Pfam

PF00076--RRM_1

SMART

SM00361--RRM_1

Gene Ontology

GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000464	Aegilops tauschii	61.25	0.00e+00	1308.00
IUUC-Aml-002384	Ailuropoda melanoleuca	40.95	7.00e-52	197.00
IUUC-Atr-002462	Amborella trichopoda	60.37	5.00e-120	424.00
IUUC-Apl-003756	Anas platyrhynchos	40.95	3.00e-53	202.00
IUUC-Aca-004643	Anolis carolinensis	40.95	4.00e-53	202.00
IUUC-Aly-006093	Arabidopsis lyrata	57.19	3.00e-109	389.00
IUUC-Ath-007371	Arabidopsis thaliana	52.97	2.00e-112	399.00
IUUC-Ago-007799	Ashbya gossypii	39.92	3.00e-52	198.00
IUUC-Acl-008077	Aspergillus clavatus	39.48	6.00e-45	176.00
IUUC-Afl-008720	Aspergillus flavus	36.36	2.00e-50	194.00
IUUC-Afu-008905	Aspergillus fumigatus	36.39	1.00e-45	178.00
IUUC-Ani-009264	Aspergillus nidulans	35.77	2.00e-34	140.00
IUUC-Ang-009537	Aspergillus niger	35.90	2.00e-50	194.00
IUUC-Aor-010123	Aspergillus oryzae	37.00	3.00e-32	133.00
IUUC-Ate-010409	Aspergillus terreus	35.31	1.00e-49	191.00
IUUC-Ame-011538	Astyanax mexicanus	40.52	7.00e-44	171.00
IUUC-Bgr-012062	Blumeria graminis	33.33	2.00e-50	194.00
IUUC-Bta-012419	Bos taurus	40.95	2.00e-52	199.00
IUUC-Bci-013633	Botrytis cinerea	39.16	6.00e-50	192.00
IUUC-Bdi-014913	Brachypodium distachyon	65.16	0.00e+00	1352.00
IUUC-Bol-016407	Brassica oleracea	59.88	2.00e-115	409.00
IUUC-Bra-017755	Brassica rapa	54.39	3.00e-115	409.00
IUUC-Cel-018123	Caenorhabditis elegans	36.86	4.00e-48	185.00
IUUC-Cja-019705	Callithrix jacchus	40.95	9.00e-53	200.00
IUUC-Cfa-020440	Canis familiaris	40.95	9.00e-53	200.00
IUUC-Cpo-022091	Cavia porcellus	39.22	1.00e-51	196.00
IUUC-Csa-024202	Chlorocebus sabaeus	40.95	1.00e-52	200.00
IUUC-Cho-024410	Choloepus hoffmanni	38.22	3.00e-35	142.00
IUUC-Cin-025558	Ciona intestinalis	38.79	4.00e-51	195.00
IUUC-Cgl-026687	Colletotrichum gloeosporioides	38.37	1.00e-48	187.00
IUUC-Cne-027084	Cryptococcus neoformans	34.38	4.00e-39	155.00
IUUC-Cme-027148	Cyanidioschyzon merolae	28.78	5.00e-22	98.60
IUUC-Dre-028377	Danio rerio	40.52	5.00e-44	172.00
IUUC-Dno-029100	Dasypus novemcinctus	40.95	8.00e-53	201.00
IUUC-Dor-030310	Dipodomys ordii	40.52	1.00e-46	181.00
IUUC-Dse-031514	Dothistroma septosporum	38.37	4.00e-49	188.00
IUUC-Dme-031735	Drosophila melanogaster	36.36	3.00e-48	186.00
IUUC-Ete-033091	Echinops telfairi	38.79	8.00e-47	181.00
IUUC-Eca-033506	Equus caballus	40.95	2.00e-52	199.00
IUUC-Eeu-034506	Erinaceus europaeus	37.07	7.00e-45	174.00
IUUC-Fca-036033	Felis catus	40.95	2.00e-52	199.00
IUUC-Fal-037540	Ficedula albicollis	40.95	2.00e-53	203.00
IUUC-Fox-037944	Fusarium oxysporum	38.78	6.00e-53	201.00
IUUC-Fso-038172	Fusarium solani	36.33	2.00e-44	174.00
IUUC-Gmo-039211	Gadus morhua	35.60	2.00e-44	173.00
IUUC-Ggr-040096	Gaeumannomyces graminis	37.96	8.00e-51	195.00
IUUC-Gga-040487	Gallus gallus	40.95	3.00e-53	202.00
IUUC-Gac-042294	Gasterosteus aculeatus	40.51	2.00e-44	173.00
IUUC-Gma-043229	Glycine max	57.78	5.00e-122	431.00
IUUC-Ggo-044950	Gorilla gorilla	47.79	3.00e-38	152.00
IUUC-Hsa-046666	Homo sapiens	40.95	3.00e-52	198.00
IUUC-Hvu-047405	Hordeum vulgare	61.30	0.00e+00	1334.00
IUUC-Itr-047888	Ictidomys tridecemlineatus	40.52	7.00e-49	186.00
IUUC-Kpa-049260	Komagataella pastoris	39.84	1.00e-48	187.00
IUUC-Lch-050203	Latimeria chalumnae	40.95	7.00e-53	201.00
IUUC-Lpe-051195	Leersia perrieri	82.37	3.00e-147	515.00
IUUC-Loc-052886	Lepisosteus oculatus	40.95	6.00e-45	175.00
IUUC-Lma-053073	Leptosphaeria maculans	36.32	2.00e-44	173.00
IUUC-Laf-053490	Loxodonta africana	40.95	1.00e-52	200.00
IUUC-Mcc-055724	Macaca mulatta	40.95	2.00e-52	200.00
IUUC-Meu-056787	Macropus eugenii	38.14	1.00e-19	90.90
IUUC-Mor-056921	Magnaporthe oryzae	36.73	4.00e-49	189.00
IUUC-Mpo-057616	Magnaporthe poae	37.96	1.00e-50	194.00
IUUC-Mtr-058426	Medicago truncatula	54.45	4.00e-115	408.00
IUUC-Mla-059146	Melampsora laricipopulina	35.97	9.00e-43	168.00
IUUC-Mga-059372	Meleagris gallopavo	40.95	3.00e-53	202.00
IUUC-Mvi-060479	Microbotryum violaceum	34.91	2.00e-33	137.00
IUUC-Mmr-061012	Microcebus murinus	40.95	1.00e-52	200.00
IUUC-Mdo-062330	Monodelphis domestica	40.95	5.00e-53	201.00
IUUC-Mmu-063894	Mus musculus	40.95	9.00e-53	200.00
IUUC-Mac-064805	Musa acuminata	73.17	2.00e-114	404.00
IUUC-Mpu-066894	Mustela putorius furo	40.95	9.00e-53	200.00
IUUC-Mlu-067321	Myotis lucifugus	40.95	2.00e-52	199.00
IUUC-Nfi-068451	Neosartorya fischeri	36.39	2.00e-46	181.00
IUUC-Ncr-068667	Neurospora crassa	38.55	1.00e-49	191.00
IUUC-Nle-070058	Nomascus leucogenys	41.38	8.00e-50	191.00
IUUC-Opr-071108	Ochotona princeps	46.23	2.00e-26	113.00
IUUC-Ont-071541	Oreochromis niloticus	40.83	2.00e-44	173.00
IUUC-Oan-073232	Ornithorhynchus anatinus	40.95	5.00e-53	201.00
IUUC-Ocu-074893	Oryctolagus cuniculus	40.95	2.00e-52	199.00
IUUC-Oba-075623	Oryza barthii	83.91	1.00e-79	288.00
IUUC-Obr-076653	Oryza brachyantha	59.87	0.00e+00	1198.00
IUUC-Ogl-077946	Oryza glaberrima	87.96	4.00e-108	382.00
IUUC-Ogu-078775	Oryza glumaepatula	88.54	9.00e-146	508.00
IUUC-Oin-079214	Oryza indica	65.99	0.00e+00	778.00
IUUC-Olo-080799	Oryza longistaminata	69.43	2.00e-80	290.00
IUUC-Ome-081843	Oryza meridionalis	81.57	4.00e-170	590.00
IUUC-Oni-082944	Oryza nivara	83.91	2.00e-79	287.00
IUUC-Opu-083668	Oryza punctata	61.57	0.00e+00	1290.00
IUUC-Oru-084249	Oryza rufipogon	40.56	9.00e-58	218.00
IUUC-Osa-086233	Oryza sativa	61.34	0.00e+00	1263.00
IUUC-Ola-087121	Oryzias latipes	37.50	4.00e-45	175.00
IUUC-Olu-087772	Ostreococcus lucimarinus	42.52	5.00e-46	176.00
IUUC-Oga-088556	Otolemur garnettii	40.95	1.00e-52	200.00
IUUC-Oar-089768	Ovis aries	40.95	1.00e-52	200.00
IUUC-Ptr-090585	Pan troglodytes	40.95	2.00e-52	199.00
IUUC-Pan-092625	Papio anubis	40.95	1.00e-52	200.00
IUUC-Psi-093462	Pelodiscus sinensis	40.95	7.00e-53	201.00
IUUC-Pma-094468	Petromyzon marinus	37.07	5.00e-45	175.00
IUUC-Pno-094812	Phaeosphaeria nodorum	31.02	6.00e-21	96.70
IUUC-Pfo-096762	Poecilia formosa	37.83	9.00e-45	174.00
IUUC-Pab-097890	Pongo abelii	40.95	1.00e-52	200.00
IUUC-Pop-099764	Populus trichocarpa	55.45	3.00e-125	442.00
IUUC-Pca-101121	Procavia capensis	46.32	5.00e-34	138.00
IUUC-Ppe-102076	Prunus persica	62.88	4.00e-122	431.00
IUUC-Pva-102489	Pteropus vampyrus	40.95	9.00e-52	197.00
IUUC-Pgr-103568	Puccinia graminis	34.78	5.00e-39	155.00
IUUC-Ptt-103721	Puccinia triticina	31.48	2.00e-20	93.60
IUUC-Pte-104118	Pyrenophora teres	40.08	5.00e-50	192.00
IUUC-Pyt-104612	Pyrenophora triticirepentis	40.08	2.00e-50	192.00
IUUC-Rno-105627	Rattus norvegicus	40.95	1.00e-52	200.00
IUUC-Sce-106312	Saccharomyces cerevisiae	34.56	1.00e-48	187.00
IUUC-Sha-106619	Sarcophilus harrisii	40.95	6.00e-53	201.00
IUUC-Sja-107765	Schizosaccharomyces japonicus	39.53	3.00e-50	191.00
IUUC-Spo-108328	Schizosaccharomyces pombe	40.74	9.00e-52	196.00
IUUC-Ssl-108577	Sclerotinia sclerotiorum	38.87	7.00e-44	171.00
IUUC-Smo-108760	Selaginella moellendorffii	51.82	4.00e-79	286.00
IUUC-Sit-109923	Setaria italica	77.80	0.00e+00	1704.00
IUUC-Sly-110900	Solanum lycopersicum	55.74	2.00e-100	359.00
IUUC-Stu-112226	Solanum tuberosum	58.91	2.00e-100	359.00
IUUC-Sar-113620	Sorex araneus	40.95	9.00e-51	194.00
IUUC-Sre-114956	Sporisorium reilianum	37.32	6.00e-53	202.00
IUUC-Ssc-116116	Sus scrofa	40.52	7.00e-49	186.00
IUUC-Tgu-117357	Taeniopygia guttata	40.95	3.00e-53	202.00
IUUC-Tru-118759	Takifugu rubripes	40.42	3.00e-44	172.00
IUUC-Tsy-119387	Tarsius syrichta	40.95	1.00e-51	196.00
IUUC-Tni-120536	Tetraodon nigroviridis	40.00	4.00e-44	172.00
IUUC-Tca-121035	Theobroma cacao	61.41	2.00e-125	442.00
IUUC-Tre-121996	Trichoderma reesei	35.92	5.00e-44	172.00
IUUC-Tvi-122371	Trichoderma virens	37.14	4.00e-49	189.00
IUUC-Tae-124373	Triticum aestivum	66.00	0.00e+00	1074.00
IUUC-Tur-126324	Triticum urartu	61.49	0.00e+00	1330.00
IUUC-Tme-127072	Tuber melanosporum	32.95	2.00e-34	141.00
IUUC-Tbe-128107	Tupaia belangeri	38.79	2.00e-48	186.00
IUUC-Ttr-128846	Tursiops truncatus	40.95	1.00e-51	197.00
IUUC-Uma-129607	Ustilago maydis	40.16	6.00e-53	202.00
IUUC-Vda-129971	Verticillium dahliae	36.36	9.00e-40	159.00
IUUC-Vpa-130298	Vicugna pacos	35.34	2.00e-40	160.00
IUUC-Vvi-131651	Vitis vinifera	60.49	3.00e-119	422.00
IUUC-Xtr-132728	Xenopus tropicalis	40.95	2.00e-52	199.00
IUUC-Xma-133789	Xiphophorus maculatus	37.37	2.00e-44	173.00
IUUC-Yli-134461	Yarrowia lipolytica	36.21	2.00e-42	165.00
IUUC-Zma-135031	Zea mays	86.16	0.00e+00	1444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence