iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114253

Ensembl Protein ID

Sb08g017080.1

UniProt Accession

C5YPC8; C5YPC8_SORBI

Genbank Protein ID

EES16091.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G117200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g017080	Sb08g017080.1	Sb08g017080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.00e-09	36.9	165	207

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadCl.qkwpglknssskefrCPlC 45
           C+iC+e ++d    ++vl+CgH++h++C+ +++      + ++ +CP+C
   Q: 165  CPICYEYLFDSlqgTRVLNCGHTMHLTCFeEMV------EHNKYTCPIC 207
           ******9977545599*************5555......********** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGGAQFLGDN DVVAARDGEA VDHRRDVGKM EHGCEHYRRR CKIVAPCCNQ VFPCRHCHNE 60
ATASGDRHTI VRQDVKKVVC LLCETEQPVS QVCISCGVNM GEYFCDICKF YDDDIGKGQY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTTTATCA CGGCATTTTA CCTGGAGGCC CCTGACCGCC CTCGCTATTT ACATCCCTGC 60
CACCCTCCTC TCCGCCGCCG TCGCCGCCGC CGCCGGGGAT GGGGGGAGCG CAGTTCCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR031109--Rinc_finger_CHY_Zinc_plant
IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

sbi:SORBI_08g017080

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002312	Ailuropoda melanoleuca	47.58	7.00e-63	232.00
IUUC-Atr-002810	Amborella trichopoda	64.17	4.00e-101	359.00
IUUC-Apl-003676	Anas platyrhynchos	51.05	2.00e-34	137.00
IUUC-Aly-005693	Arabidopsis lyrata	65.37	4.00e-103	366.00
IUUC-Ath-006798	Arabidopsis thaliana	64.98	2.00e-102	364.00
IUUC-Bta-013191	Bos taurus	46.06	5.00e-61	226.00
IUUC-Bdi-014453	Brachypodium distachyon	80.37	5.00e-132	462.00
IUUC-Bol-016370	Brassica oleracea	64.98	1.00e-103	367.00
IUUC-Bra-017472	Brassica rapa	64.59	1.00e-102	364.00
IUUC-Cja-019581	Callithrix jacchus	46.90	9.00e-64	235.00
IUUC-Cfa-021051	Canis familiaris	48.35	4.00e-63	233.00
IUUC-Cpo-022137	Cavia porcellus	51.06	7.00e-39	151.00
IUUC-Csa-024259	Chlorocebus sabaeus	46.90	2.00e-63	234.00
IUUC-Cho-024855	Choloepus hoffmanni	45.75	7.00e-57	212.00
IUUC-Cin-025667	Ciona intestinalis	46.34	4.00e-65	240.00
IUUC-Csv-025807	Ciona savignyi	46.15	3.00e-66	244.00
IUUC-Dre-028584	Danio rerio	48.10	2.00e-64	237.00
IUUC-Dor-030930	Dipodomys ordii	41.10	1.00e-42	164.00
IUUC-Dse-031251	Dothistroma septosporum	37.23	1.00e-50	194.00
IUUC-Dme-031649	Drosophila melanogaster	42.74	1.00e-48	186.00
IUUC-Ete-032847	Echinops telfairi	51.69	3.00e-22	97.80
IUUC-Eca-033470	Equus caballus	48.44	4.00e-58	216.00
IUUC-Eeu-034769	Erinaceus europaeus	37.86	2.00e-23	101.00
IUUC-Fca-035728	Felis catus	47.58	2.00e-61	228.00
IUUC-Fal-036768	Ficedula albicollis	47.83	4.00e-54	203.00
IUUC-Gmo-038620	Gadus morhua	46.84	7.00e-57	213.00
IUUC-Gga-040156	Gallus gallus	49.15	4.00e-62	230.00
IUUC-Gac-041535	Gasterosteus aculeatus	46.84	3.00e-54	204.00
IUUC-Gma-044156	Glycine max	63.60	8.00e-103	365.00
IUUC-Ggo-044951	Gorilla gorilla	46.90	2.00e-63	234.00
IUUC-Hsa-045737	Homo sapiens	46.90	2.00e-63	234.00
IUUC-Hvu-047085	Hordeum vulgare	82.66	1.00e-134	471.00
IUUC-Itr-048684	Ictidomys tridecemlineatus	47.58	6.00e-63	233.00
IUUC-Lch-050661	Latimeria chalumnae	46.84	1.00e-60	224.00
IUUC-Lpe-051107	Leersia perrieri	86.53	4.00e-130	456.00
IUUC-Loc-051936	Lepisosteus oculatus	48.52	3.00e-62	231.00
IUUC-Laf-054226	Loxodonta africana	47.72	1.00e-59	222.00
IUUC-Mcc-055281	Macaca mulatta	46.90	2.00e-63	234.00
IUUC-Meu-056901	Macropus eugenii	45.26	6.00e-49	186.00
IUUC-Mtr-057867	Medicago truncatula	66.15	4.00e-104	369.00
IUUC-Mga-059512	Meleagris gallopavo	50.43	9.00e-30	121.00
IUUC-Mmr-060992	Microcebus murinus	48.31	6.00e-61	226.00
IUUC-Mdo-062157	Monodelphis domestica	48.26	3.00e-53	200.00
IUUC-Mmu-063959	Mus musculus	47.98	6.00e-59	219.00
IUUC-Mac-065603	Musa acuminata	63.85	3.00e-99	353.00
IUUC-Mpu-065859	Mustela putorius furo	45.13	6.00e-25	105.00
IUUC-Mlu-067798	Myotis lucifugus	43.78	2.00e-51	194.00
IUUC-Nle-069585	Nomascus leucogenys	46.90	2.00e-63	234.00
IUUC-Opr-070267	Ochotona princeps	48.16	5.00e-63	233.00
IUUC-Ont-071374	Oreochromis niloticus	46.41	9.00e-57	212.00
IUUC-Oan-073381	Ornithorhynchus anatinus	46.67	6.00e-54	202.00
IUUC-Ocu-074867	Oryctolagus cuniculus	47.58	3.00e-63	233.00
IUUC-Oba-075296	Oryza barthii	88.05	6.00e-135	472.00
IUUC-Obr-076751	Oryza brachyantha	84.70	6.00e-135	472.00
IUUC-Ogl-077845	Oryza glaberrima	88.05	6.00e-135	472.00
IUUC-Ogu-078918	Oryza glumaepatula	86.64	4.00e-123	433.00
IUUC-Olo-080782	Oryza longistaminata	86.78	1.00e-129	455.00
IUUC-Ome-081602	Oryza meridionalis	84.00	4.00e-139	486.00
IUUC-Oni-082797	Oryza nivara	84.00	6.00e-135	472.00
IUUC-Opu-083572	Oryza punctata	88.05	2.00e-134	471.00
IUUC-Oru-085188	Oryza rufipogon	88.05	1.00e-136	479.00
IUUC-Osa-085573	Oryza sativa	84.00	8.00e-135	471.00
IUUC-Ola-087568	Oryzias latipes	47.26	2.00e-56	211.00
IUUC-Oga-089082	Otolemur garnettii	46.44	1.00e-57	215.00
IUUC-Oar-089298	Ovis aries	47.30	4.00e-62	230.00
IUUC-Ptr-091569	Pan troglodytes	48.95	2.00e-63	234.00
IUUC-Pan-092256	Papio anubis	45.74	8.00e-61	226.00
IUUC-Psi-093159	Pelodiscus sinensis	48.48	5.00e-52	196.00
IUUC-Pma-094483	Petromyzon marinus	43.97	4.00e-49	186.00
IUUC-Pfo-096583	Poecilia formosa	47.26	6.00e-62	229.00
IUUC-Pab-098741	Pongo abelii	46.90	2.00e-63	234.00
IUUC-Pop-099126	Populus trichocarpa	64.86	1.00e-103	368.00
IUUC-Pca-100669	Procavia capensis	46.34	1.00e-27	115.00
IUUC-Ppe-101325	Prunus persica	65.78	6.00e-106	375.00
IUUC-Pva-102213	Pteropus vampyrus	47.08	1.00e-62	232.00
IUUC-Rno-105229	Rattus norvegicus	47.98	5.00e-63	233.00
IUUC-Sha-106745	Sarcophilus harrisii	47.79	2.00e-51	194.00
IUUC-Sit-110031	Setaria italica	85.98	4.00e-139	486.00
IUUC-Sly-110906	Solanum lycopersicum	61.57	1.00e-99	355.00
IUUC-Stu-112471	Solanum tuberosum	66.02	7.00e-104	369.00
IUUC-Sar-113709	Sorex araneus	47.76	6.00e-63	233.00
IUUC-Ssc-116428	Sus scrofa	45.13	4.00e-51	193.00
IUUC-Tgu-116992	Taeniopygia guttata	49.59	4.00e-60	223.00
IUUC-Tru-118486	Takifugu rubripes	45.37	3.00e-47	180.00
IUUC-Tsy-118833	Tarsius syrichta	39.11	3.00e-39	154.00
IUUC-Tni-120395	Tetraodon nigroviridis	47.68	1.00e-55	209.00
IUUC-Tca-121199	Theobroma cacao	67.61	7.00e-103	365.00
IUUC-Tae-122877	Triticum aestivum	82.29	1.00e-130	457.00
IUUC-Tme-127113	Tuber melanosporum	42.91	5.00e-57	214.00
IUUC-Ttr-128736	Tursiops truncatus	44.78	3.00e-27	114.00
IUUC-Vpa-130311	Vicugna pacos	47.11	3.00e-54	203.00
IUUC-Vvi-131409	Vitis vinifera	67.82	3.00e-107	380.00
IUUC-Xtr-132909	Xenopus tropicalis	46.84	7.00e-60	222.00
IUUC-Xma-133441	Xiphophorus maculatus	48.52	4.00e-63	233.00
IUUC-Zma-134792	Zea mays	91.01	4.00e-148	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence