iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115345

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP565336

Gene Name

RNF6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000024064.1	ENSSSCT00000024194.1	ENSSSCP00000023487.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-06	27.1	525	566

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +d+   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 525  CSVCISDYvtGNKLRQLPCMHEFHIHCIDRW------LSENCTCPICR 566
           9*******7744499****************......**********8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

LVYVLSEHKA RGLSMNQARS RSDGGEEESS SRDQNHQENE RRWQQERLRR EEAYYQFMND 60
LSDEDYRLMR DHDLLGTPGE ITSEELQQRL DGLKERLASQ PDLRNGTNSR DSGVPREGSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGTGTATG TCTTGTCTGA ACACAAAGCC AGGGGTCTCA GCATGAATCA GGCTAGGTCT 60
AGATCAGACG GTGGTGAGGA AGAAAGCTCA TCTCGAGACC AGAATCATCA GGAAAATGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030424--C:axon
GO:0005737--C:cytoplasm
GO:0031965--C:nuclear membrane
GO:0016605--C:PML body
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030517--P:negative regulation of axon extension
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044314--P:protein K27-linked ubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0085020--P:protein K6-linked ubiquitination
GO:0060765--P:regulation of androgen receptor signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001415	Ailuropoda melanoleuca	69.51	7.00e-113	400.00
IUUC-Atr-003049	Amborella trichopoda	36.26	2.00e-13	68.20
IUUC-Apl-003834	Anas platyrhynchos	57.02	8.00e-57	214.00
IUUC-Aca-004373	Anolis carolinensis	62.75	1.00e-48	187.00
IUUC-Ame-011730	Astyanax mexicanus	67.44	7.00e-44	171.00
IUUC-Bta-012763	Bos taurus	66.87	7.00e-110	391.00
IUUC-Bdi-014235	Brachypodium distachyon	39.29	6.00e-14	71.60
IUUC-Bol-015739	Brassica oleracea	38.37	2.00e-13	68.90
IUUC-Bra-017280	Brassica rapa	40.45	9.00e-15	73.20
IUUC-Cja-018980	Callithrix jacchus	64.78	2.00e-104	373.00
IUUC-Cfa-020416	Canis familiaris	68.09	3.00e-112	399.00
IUUC-Cpo-022086	Cavia porcellus	63.61	9.00e-94	337.00
IUUC-Csa-023246	Chlorocebus sabaeus	68.81	7.00e-113	400.00
IUUC-Cho-024749	Choloepus hoffmanni	63.49	5.00e-67	248.00
IUUC-Dre-028428	Danio rerio	65.96	1.00e-44	174.00
IUUC-Dno-029617	Dasypus novemcinctus	68.30	3.00e-109	389.00
IUUC-Dor-030800	Dipodomys ordii	65.53	4.00e-105	375.00
IUUC-Ete-032882	Echinops telfairi	68.42	3.00e-53	203.00
IUUC-Eca-033892	Equus caballus	67.07	3.00e-119	422.00
IUUC-Eeu-034563	Erinaceus europaeus	58.59	8.00e-63	234.00
IUUC-Fca-035765	Felis catus	68.24	3.00e-106	379.00
IUUC-Fal-036981	Ficedula albicollis	63.04	5.00e-51	195.00
IUUC-Gmo-039344	Gadus morhua	70.16	6.00e-45	175.00
IUUC-Gga-041114	Gallus gallus	62.44	4.00e-53	202.00
IUUC-Gac-042220	Gasterosteus aculeatus	64.34	3.00e-47	182.00
IUUC-Ggo-044902	Gorilla gorilla	67.27	2.00e-117	416.00
IUUC-Hsa-046548	Homo sapiens	67.18	5.00e-114	404.00
IUUC-Hvu-047082	Hordeum vulgare	44.58	2.00e-13	68.60
IUUC-Itr-048447	Ictidomys tridecemlineatus	68.52	2.00e-113	402.00
IUUC-Lch-050541	Latimeria chalumnae	70.00	1.00e-50	194.00
IUUC-Laf-054296	Loxodonta africana	62.31	1.00e-86	313.00
IUUC-Mcc-054858	Macaca mulatta	67.87	7.00e-120	424.00
IUUC-Meu-056296	Macropus eugenii	52.92	1.00e-73	270.00
IUUC-Mga-059307	Meleagris gallopavo	64.42	3.00e-53	202.00
IUUC-Mmr-060699	Microcebus murinus	64.52	3.00e-113	402.00
IUUC-Mdo-062162	Monodelphis domestica	52.48	1.00e-70	260.00
IUUC-Mmu-064188	Mus musculus	57.65	6.00e-82	298.00
IUUC-Mpu-065891	Mustela putorius furo	69.18	4.00e-114	405.00
IUUC-Mlu-067177	Myotis lucifugus	63.64	2.00e-107	383.00
IUUC-Nle-069127	Nomascus leucogenys	68.40	4.00e-120	425.00
IUUC-Ont-072086	Oreochromis niloticus	69.23	2.00e-42	167.00
IUUC-Ocu-074281	Oryctolagus cuniculus	83.09	5.00e-64	236.00
IUUC-Opu-084125	Oryza punctata	45.90	2.00e-13	68.90
IUUC-Oga-088750	Otolemur garnettii	65.99	9.00e-119	420.00
IUUC-Oar-089523	Ovis aries	69.23	7.00e-112	397.00
IUUC-Ptr-091533	Pan troglodytes	66.87	3.00e-113	402.00
IUUC-Pan-092675	Papio anubis	69.11	4.00e-120	424.00
IUUC-Psi-093735	Pelodiscus sinensis	58.23	5.00e-68	252.00
IUUC-Pfo-096637	Poecilia formosa	66.98	1.00e-41	164.00
IUUC-Pab-098486	Pongo abelii	68.40	4.00e-120	425.00
IUUC-Pop-099068	Populus trichocarpa	43.66	1.00e-14	72.00
IUUC-Pca-100143	Procavia capensis	75.40	1.00e-55	211.00
IUUC-Ppe-101751	Prunus persica	57.45	5.00e-13	66.60
IUUC-Pva-103151	Pteropus vampyrus	69.41	3.00e-110	392.00
IUUC-Rno-105745	Rattus norvegicus	56.93	6.00e-70	258.00
IUUC-Sce-106438	Saccharomyces cerevisiae	27.47	4.00e-07	50.10
IUUC-Sha-106681	Sarcophilus harrisii	52.12	1.00e-70	260.00
IUUC-Smo-109214	Selaginella moellendorffii	50.70	3.00e-14	72.00
IUUC-Sit-110758	Setaria italica	38.46	5.00e-13	68.20
IUUC-Sly-111610	Solanum lycopersicum	40.40	8.00e-15	73.90
IUUC-Sar-113229	Sorex araneus	77.95	3.00e-58	219.00
IUUC-Sbi-113902	Sorghum bicolor	41.05	1.00e-14	73.60
IUUC-Tgu-117477	Taeniopygia guttata	71.54	4.00e-49	189.00
IUUC-Tru-118302	Takifugu rubripes	63.57	3.00e-45	176.00
IUUC-Tsy-119338	Tarsius syrichta	65.79	2.00e-101	362.00
IUUC-Tni-119675	Tetraodon nigroviridis	68.89	1.00e-46	181.00
IUUC-Tca-120922	Theobroma cacao	49.15	2.00e-13	70.10
IUUC-Tbe-127505	Tupaia belangeri	51.94	1.00e-75	276.00
IUUC-Ttr-128367	Tursiops truncatus	73.03	5.00e-117	414.00
IUUC-Vpa-130480	Vicugna pacos	78.74	2.00e-55	210.00
IUUC-Vvi-131276	Vitis vinifera	42.62	1.00e-12	67.40
IUUC-Xma-133863	Xiphophorus maculatus	67.62	8.00e-42	165.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence