iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-045624

Ensembl Protein ID

ENSGGOP00000007362.2

UniProt Accession

G3QX31; G3QX31_GORGO

Protein Name

Uncharacterized protein

Gene Name

EED

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000007517.2	ENSGGOT00000022871.1	ENSGGOP00000019012.1
ENSGGOG00000007517.2	ENSGGOT00000007556.2	ENSGGOP00000007362.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-14	53.1	188	225

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gH + ++ l+f   d +ll+s s D+ +++W++ t++l
   Q: 188  GHGNAINELKFhpRDpNLLLSVSKDHALRLWNIQTDTL 225
           899*********9888****************999876 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MSEREVSTAP AGTDMPAAKK QKLSSDENSN PDLSGDENDD AVSIESGTNT ERPDTPTNTP 60
NAPGRKSWGK GKWKSKKCKY SFKCVNSLKE DHNQPLFGVQ FNWHSKEGDP LVFATVGSNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAGCAGCGG GTCGGAGATC GAAGGAACGG GCCAATTGCG GCTGAAACGT CTTTGGAAGG 60
AGGAAGGGGG TGAGGGAGCA TCCCTTTGAG TTTCGCCTCT TCTCGAGGCG GTGGTGGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0035098--C:ESC/E(Z) complex
GO:0045120--C:pronucleus
GO:0001739--C:sex chromatin
GO:0003682--F:chromatin binding
GO:0042054--F:histone methyltransferase activity
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0061087--P:positive regulation of histone H3-K27 methylation
GO:2000011--P:regulation of adaxial/abaxial pattern formation
GO:0006349--P:regulation of gene expression by genetic imprinting

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000689	Aegilops tauschii	38.32	9.00e-72	264.00
IUUC-Aml-001510	Ailuropoda melanoleuca	94.02	0.00e+00	850.00
IUUC-Atr-002496	Amborella trichopoda	37.70	3.00e-65	241.00
IUUC-Apl-003768	Anas platyrhynchos	91.16	0.00e+00	815.00
IUUC-Aca-004382	Anolis carolinensis	92.87	0.00e+00	810.00
IUUC-Aly-005980	Arabidopsis lyrata	38.11	1.00e-72	266.00
IUUC-Ath-006579	Arabidopsis thaliana	38.11	1.00e-72	266.00
IUUC-Ame-010987	Astyanax mexicanus	87.77	0.00e+00	789.00
IUUC-Bta-013432	Bos taurus	94.42	0.00e+00	862.00
IUUC-Bci-013970	Botrytis cinerea	32.49	3.00e-28	120.00
IUUC-Bdi-014553	Brachypodium distachyon	40.31	8.00e-74	270.00
IUUC-Bol-016522	Brassica oleracea	37.63	1.00e-71	263.00
IUUC-Bra-017137	Brassica rapa	37.63	9.00e-72	263.00
IUUC-Cel-018494	Caenorhabditis elegans	22.69	5.00e-26	112.00
IUUC-Cja-019066	Callithrix jacchus	94.64	0.00e+00	864.00
IUUC-Cfa-021261	Canis familiaris	94.64	0.00e+00	863.00
IUUC-Cpo-022375	Cavia porcellus	89.27	0.00e+00	798.00
IUUC-Csa-024005	Chlorocebus sabaeus	94.64	0.00e+00	863.00
IUUC-Cho-024881	Choloepus hoffmanni	76.79	0.00e+00	683.00
IUUC-Cin-025697	Ciona intestinalis	57.07	8.00e-138	483.00
IUUC-Csv-026221	Ciona savignyi	59.16	3.00e-141	494.00
IUUC-Cgl-026519	Colletotrichum gloeosporioides	25.43	4.00e-21	95.90
IUUC-Cne-026877	Cryptococcus neoformans	30.12	3.00e-27	117.00
IUUC-Cme-027353	Cyanidioschyzon merolae	39.41	3.00e-29	122.00
IUUC-Dre-028346	Danio rerio	86.40	0.00e+00	770.00
IUUC-Dno-029319	Dasypus novemcinctus	93.78	0.00e+00	855.00
IUUC-Dor-030746	Dipodomys ordii	71.67	0.00e+00	651.00
IUUC-Dse-031324	Dothistroma septosporum	25.77	4.00e-26	112.00
IUUC-Dme-032029	Drosophila melanogaster	56.92	7.00e-134	470.00
IUUC-Ete-032880	Echinops telfairi	70.88	1.00e-150	526.00
IUUC-Eca-034272	Equus caballus	94.16	0.00e+00	786.00
IUUC-Eeu-035303	Erinaceus europaeus	92.06	0.00e+00	833.00
IUUC-Fca-036008	Felis catus	94.47	0.00e+00	834.00
IUUC-Fal-037577	Ficedula albicollis	92.29	0.00e+00	771.00
IUUC-Fso-038294	Fusarium solani	24.39	1.00e-25	110.00
IUUC-Gmo-039008	Gadus morhua	84.58	0.00e+00	747.00
IUUC-Ggr-039894	Gaeumannomyces graminis	30.00	2.00e-22	100.00
IUUC-Gga-040859	Gallus gallus	92.87	0.00e+00	808.00
IUUC-Gac-041667	Gasterosteus aculeatus	82.87	0.00e+00	742.00
IUUC-Gma-043832	Glycine max	37.34	4.00e-71	261.00
IUUC-Hsa-046505	Homo sapiens	94.64	0.00e+00	863.00
IUUC-Hvu-047228	Hordeum vulgare	33.33	8.00e-29	119.00
IUUC-Itr-048381	Ictidomys tridecemlineatus	94.42	0.00e+00	862.00
IUUC-Lch-050492	Latimeria chalumnae	91.05	0.00e+00	809.00
IUUC-Lpe-050807	Leersia perrieri	35.32	1.00e-68	253.00
IUUC-Loc-052361	Lepisosteus oculatus	87.82	0.00e+00	793.00
IUUC-Lma-053058	Leptosphaeria maculans	26.58	2.00e-19	90.50
IUUC-Laf-053941	Loxodonta africana	87.55	0.00e+00	813.00
IUUC-Mcc-055518	Macaca mulatta	100.00	0.00e+00	929.00
IUUC-Mor-056944	Magnaporthe oryzae	25.58	8.00e-25	108.00
IUUC-Mtr-058716	Medicago truncatula	39.80	2.00e-67	249.00
IUUC-Mga-059469	Meleagris gallopavo	92.87	0.00e+00	808.00
IUUC-Mmr-061026	Microcebus murinus	99.79	0.00e+00	929.00
IUUC-Mdo-062346	Monodelphis domestica	92.92	0.00e+00	848.00
IUUC-Mmu-063785	Mus musculus	94.64	0.00e+00	863.00
IUUC-Mac-064681	Musa acuminata	38.42	1.00e-75	276.00
IUUC-Mpu-066862	Mustela putorius furo	94.64	0.00e+00	863.00
IUUC-Mlu-067103	Myotis lucifugus	87.15	0.00e+00	714.00
IUUC-Ncr-068782	Neurospora crassa	29.96	6.00e-24	105.00
IUUC-Nle-069472	Nomascus leucogenys	94.64	0.00e+00	863.00
IUUC-Opr-070376	Ochotona princeps	87.40	6.00e-122	430.00
IUUC-Ont-071513	Oreochromis niloticus	86.91	0.00e+00	804.00
IUUC-Oan-073202	Ornithorhynchus anatinus	92.99	0.00e+00	777.00
IUUC-Ocu-074012	Oryctolagus cuniculus	94.42	0.00e+00	863.00
IUUC-Oba-075030	Oryza barthii	39.80	2.00e-76	279.00
IUUC-Obr-076895	Oryza brachyantha	39.35	3.00e-74	272.00
IUUC-Ogl-077522	Oryza glaberrima	40.00	1.00e-75	276.00
IUUC-Ogu-078250	Oryza glumaepatula	36.34	3.00e-64	239.00
IUUC-Oin-079886	Oryza indica	39.54	7.00e-76	277.00
IUUC-Olo-080238	Oryza longistaminata	39.80	3.00e-76	278.00
IUUC-Ome-081204	Oryza meridionalis	36.73	3.00e-63	235.00
IUUC-Oni-082388	Oryza nivara	36.15	2.00e-66	246.00
IUUC-Opu-083537	Oryza punctata	39.45	9.00e-75	273.00
IUUC-Oru-084863	Oryza rufipogon	36.60	5.00e-65	241.00
IUUC-Osa-085622	Oryza sativa	39.75	1.00e-76	279.00
IUUC-Ola-087426	Oryzias latipes	84.85	0.00e+00	787.00
IUUC-Olu-087788	Ostreococcus lucimarinus	28.15	2.00e-40	159.00
IUUC-Oga-088228	Otolemur garnettii	94.21	0.00e+00	860.00
IUUC-Oar-090139	Ovis aries	93.93	0.00e+00	784.00
IUUC-Pan-092874	Papio anubis	91.29	4.00e-155	540.00
IUUC-Psi-093927	Pelodiscus sinensis	92.76	0.00e+00	775.00
IUUC-Pma-094740	Petromyzon marinus	84.29	4.00e-138	483.00
IUUC-Pno-095072	Phaeosphaeria nodorum	25.60	5.00e-17	82.00
IUUC-Ppa-095871	Physcomitrella patens	36.55	2.00e-68	252.00
IUUC-Pfo-097208	Poecilia formosa	87.61	0.00e+00	807.00
IUUC-Pab-097658	Pongo abelii	94.64	0.00e+00	863.00
IUUC-Pop-098930	Populus trichocarpa	38.68	2.00e-74	272.00
IUUC-Ppe-101807	Prunus persica	38.07	3.00e-72	265.00
IUUC-Pva-103191	Pteropus vampyrus	85.19	0.00e+00	760.00
IUUC-Pgr-103619	Puccinia graminis	25.00	9.00e-20	91.30
IUUC-Pte-104406	Pyrenophora teres	28.24	3.00e-26	113.00
IUUC-Pyt-104821	Pyrenophora triticirepentis	25.42	1.00e-19	90.90
IUUC-Rno-105854	Rattus norvegicus	94.64	0.00e+00	863.00
IUUC-Sha-107426	Sarcophilus harrisii	92.49	0.00e+00	844.00
IUUC-Smo-109638	Selaginella moellendorffii	37.56	2.00e-71	262.00
IUUC-Sit-110481	Setaria italica	39.11	9.00e-75	273.00
IUUC-Sly-111464	Solanum lycopersicum	37.34	2.00e-71	262.00
IUUC-Stu-112910	Solanum tuberosum	37.34	2.00e-71	262.00
IUUC-Sar-113754	Sorex araneus	97.69	0.00e+00	714.00
IUUC-Sbi-114023	Sorghum bicolor	39.37	9.00e-76	276.00
IUUC-Ssc-115386	Sus scrofa	94.64	0.00e+00	863.00
IUUC-Tgu-117123	Taeniopygia guttata	92.07	0.00e+00	810.00
IUUC-Tru-117720	Takifugu rubripes	86.75	0.00e+00	811.00
IUUC-Tsy-119584	Tarsius syrichta	99.79	0.00e+00	927.00
IUUC-Tni-119695	Tetraodon nigroviridis	86.32	0.00e+00	806.00
IUUC-Tca-121787	Theobroma cacao	38.93	7.00e-74	270.00
IUUC-Tvi-122409	Trichoderma virens	23.11	7.00e-19	88.60
IUUC-Tae-124454	Triticum aestivum	38.32	9.00e-72	264.00
IUUC-Tme-126906	Tuber melanosporum	28.83	2.00e-32	133.00
IUUC-Tbe-127557	Tupaia belangeri	85.19	0.00e+00	801.00
IUUC-Vda-129774	Verticillium dahliae	24.78	3.00e-19	89.70
IUUC-Vpa-130256	Vicugna pacos	90.52	0.00e+00	778.00
IUUC-Vvi-131201	Vitis vinifera	38.93	1.00e-72	266.00
IUUC-Xtr-132206	Xenopus tropicalis	88.96	0.00e+00	805.00
IUUC-Xma-134102	Xiphophorus maculatus	87.61	0.00e+00	808.00
IUUC-Zma-135593	Zea mays	39.90	2.00e-76	278.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence