iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022556

Ensembl Protein ID

EDO97495

UniProt Accession

A8JF17; A8JF17_CHLRE

Genbank Protein ID

EDO97495.1

Protein Name

Bi-ubiquitin, major isoform

Genbank Nucleotide ID

DS496173

Gene Name

UBQ1a|UBQ1b; CHLREDRAFT_140045

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_140045	EDO97495	EDO97495
CHLREDRAFT_140045	EDO97496	EDO97496

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	3.20e-84	276.8	77	152
ULD/UDP/UBQ/UBQ_PIM	5.10e-59	195.7	77	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 77   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 77   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 149
           99********************************************************************986 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTIE NVKAKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTACACTACT CCTGTGACTG TATCCATACA AACTTACACG TCGTTCAAGC GTAACCTCAA 60
GGCTTGAAAT CCCGACTGTA TCAACAAGAA GCACCGCACA CCAGCATCCG GCCCTCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

KEGG

cre:CHLREDRAFT_140045

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000772	Aegilops tauschii	55.09	2.00e-41	163.00
IUUC-Aml-001483	Ailuropoda melanoleuca	97.37	2.00e-82	296.00
IUUC-Apl-004138	Anas platyrhynchos	97.37	1.00e-82	296.00
IUUC-Aca-004901	Anolis carolinensis	97.37	3.00e-82	296.00
IUUC-Aly-005835	Arabidopsis lyrata	98.68	4.00e-84	302.00
IUUC-Ath-007333	Arabidopsis thaliana	98.68	1.00e-83	301.00
IUUC-Ago-007937	Ashbya gossypii	96.05	5.00e-82	296.00
IUUC-Acl-008108	Aspergillus clavatus	96.05	5.00e-82	295.00
IUUC-Afl-008740	Aspergillus flavus	96.05	4.00e-82	295.00
IUUC-Afu-009031	Aspergillus fumigatus	96.05	4.00e-82	296.00
IUUC-Ani-009444	Aspergillus nidulans	96.05	8.00e-82	295.00
IUUC-Ang-009646	Aspergillus niger	96.05	1.00e-81	294.00
IUUC-Aor-009964	Aspergillus oryzae	96.05	4.00e-82	295.00
IUUC-Ate-010298	Aspergillus terreus	96.05	4.00e-82	295.00
IUUC-Ame-011696	Astyanax mexicanus	97.37	3.00e-82	296.00
IUUC-Bta-012356	Bos taurus	97.37	3.00e-82	296.00
IUUC-Bci-013832	Botrytis cinerea	97.39	2.00e-83	300.00
IUUC-Bdi-014399	Brachypodium distachyon	98.69	3.00e-84	302.00
IUUC-Bol-015864	Brassica oleracea	98.68	6.00e-84	300.00
IUUC-Bra-016629	Brassica rapa	98.68	6.00e-84	300.00
IUUC-Cel-018571	Caenorhabditis elegans	97.37	1.00e-82	299.00
IUUC-Cja-019680	Callithrix jacchus	97.37	2.00e-82	296.00
IUUC-Cfa-021247	Canis familiaris	97.37	2.00e-82	296.00
IUUC-Csa-023335	Chlorocebus sabaeus	97.37	1.00e-82	296.00
IUUC-Cin-025600	Ciona intestinalis	94.74	2.00e-81	294.00
IUUC-Csv-026265	Ciona savignyi	93.42	3.00e-80	291.00
IUUC-Cgl-026543	Colletotrichum gloeosporioides	96.08	7.00e-83	297.00
IUUC-Cne-026938	Cryptococcus neoformans	97.39	4.00e-83	300.00
IUUC-Dre-028552	Danio rerio	97.37	4.00e-82	296.00
IUUC-Dno-029812	Dasypus novemcinctus	97.37	3.00e-82	296.00
IUUC-Dor-031044	Dipodomys ordii	97.10	9.00e-75	270.00
IUUC-Dse-031434	Dothistroma septosporum	96.08	7.00e-83	297.00
IUUC-Dme-031687	Drosophila melanogaster	97.37	5.00e-82	296.00
IUUC-Eca-033850	Equus caballus	97.37	2.00e-82	296.00
IUUC-Fca-036501	Felis catus	97.37	2.00e-82	296.00
IUUC-Fal-036678	Ficedula albicollis	97.37	3.00e-82	296.00
IUUC-Fox-037730	Fusarium oxysporum	96.71	1.00e-82	297.00
IUUC-Fso-038454	Fusarium solani	96.71	2.00e-82	297.00
IUUC-Ggr-040118	Gaeumannomyces graminis	96.08	1.00e-82	297.00
IUUC-Gga-040636	Gallus gallus	97.37	1.00e-82	297.00
IUUC-Gac-042568	Gasterosteus aculeatus	96.73	3.00e-82	297.00
IUUC-Gma-042683	Glycine max	98.68	1.00e-83	300.00
IUUC-Ggo-045286	Gorilla gorilla	97.37	2.00e-82	296.00
IUUC-Hsa-046862	Homo sapiens	97.37	2.00e-82	296.00
IUUC-Itr-048563	Ictidomys tridecemlineatus	93.41	3.00e-44	167.00
IUUC-Kpa-049199	Komagataella pastoris	96.05	3.00e-82	296.00
IUUC-Lma-053015	Leptosphaeria maculans	96.08	2.00e-82	297.00
IUUC-Laf-053586	Loxodonta africana	97.37	2.00e-82	296.00
IUUC-Mcc-055509	Macaca mulatta	97.37	2.00e-82	296.00
IUUC-Mor-056991	Magnaporthe oryzae	96.08	1.00e-82	297.00
IUUC-Mpo-057384	Magnaporthe poae	96.08	1.00e-82	297.00
IUUC-Mtr-057803	Medicago truncatula	98.68	1.00e-83	301.00
IUUC-Mla-058957	Melampsora laricipopulina	98.68	2.00e-83	301.00
IUUC-Mga-059439	Meleagris gallopavo	97.37	1.00e-82	296.00
IUUC-Mvi-060484	Microbotryum violaceum	97.33	6.00e-39	151.00
IUUC-Mmr-061259	Microcebus murinus	97.37	2.00e-82	296.00
IUUC-Mdo-062396	Monodelphis domestica	97.37	2.00e-82	296.00
IUUC-Mmu-064367	Mus musculus	97.37	3.00e-82	296.00
IUUC-Mac-065145	Musa acuminata	88.89	2.00e-72	262.00
IUUC-Mpu-066106	Mustela putorius furo	96.71	2.00e-81	293.00
IUUC-Mlu-068055	Myotis lucifugus	97.37	1.00e-82	296.00
IUUC-Nfi-068475	Neosartorya fischeri	96.05	5.00e-82	295.00
IUUC-Ncr-068770	Neurospora crassa	96.08	8.00e-82	295.00
IUUC-Nle-069822	Nomascus leucogenys	97.37	2.00e-82	296.00
IUUC-Opr-070947	Ochotona princeps	97.37	2.00e-82	296.00
IUUC-Oan-073690	Ornithorhynchus anatinus	97.37	2.00e-82	296.00
IUUC-Ocu-074508	Oryctolagus cuniculus	97.37	2.00e-82	296.00
IUUC-Obr-076626	Oryza brachyantha	98.69	4.00e-84	303.00
IUUC-Ogl-077274	Oryza glaberrima	98.69	4.00e-84	302.00
IUUC-Oin-079350	Oryza indica	98.69	2.00e-84	302.00
IUUC-Olo-080418	Oryza longistaminata	34.67	5.00e-19	86.70
IUUC-Osa-085328	Oryza sativa	98.69	7.00e-84	302.00
IUUC-Ola-087192	Oryzias latipes	97.39	2.00e-82	298.00
IUUC-Olu-087888	Ostreococcus lucimarinus	98.68	2.00e-83	300.00
IUUC-Oga-089171	Otolemur garnettii	97.37	1.00e-82	296.00
IUUC-Oar-089637	Ovis aries	97.37	2.00e-82	296.00
IUUC-Ptr-091663	Pan troglodytes	97.37	2.00e-82	296.00
IUUC-Pan-092134	Papio anubis	97.37	4.00e-82	296.00
IUUC-Psi-093239	Pelodiscus sinensis	97.37	2.00e-82	297.00
IUUC-Pma-094556	Petromyzon marinus	97.37	3.00e-82	296.00
IUUC-Pno-095087	Phaeosphaeria nodorum	96.08	1.00e-82	297.00
IUUC-Ppa-095512	Physcomitrella patens	98.03	4.00e-83	299.00
IUUC-Pfo-096371	Poecilia formosa	97.39	2.00e-83	300.00
IUUC-Pab-098703	Pongo abelii	97.37	2.00e-82	296.00
IUUC-Pop-099398	Populus trichocarpa	98.68	8.00e-84	301.00
IUUC-Pca-100992	Procavia capensis	97.37	6.00e-82	296.00
IUUC-Ppe-101492	Prunus persica	98.68	1.00e-83	300.00
IUUC-Pva-102696	Pteropus vampyrus	97.37	2.00e-82	296.00
IUUC-Pgr-103301	Puccinia graminis	98.68	3.00e-83	300.00
IUUC-Ptt-103710	Puccinia triticina	98.68	1.00e-83	300.00
IUUC-Pte-104277	Pyrenophora teres	96.08	7.00e-83	297.00
IUUC-Pyt-104779	Pyrenophora triticirepentis	96.08	7.00e-83	297.00
IUUC-Rno-105199	Rattus norvegicus	97.37	7.00e-82	296.00
IUUC-Sce-106142	Saccharomyces cerevisiae	96.05	6.00e-82	295.00
IUUC-Sha-107155	Sarcophilus harrisii	97.37	2.00e-82	296.00
IUUC-Sja-107825	Schizosaccharomyces japonicus	96.05	6.00e-82	295.00
IUUC-Spo-108219	Schizosaccharomyces pombe	96.05	6.00e-82	295.00
IUUC-Ssl-108565	Sclerotinia sclerotiorum	97.39	5.00e-83	298.00
IUUC-Smo-108834	Selaginella moellendorffii	97.39	6.00e-83	298.00
IUUC-Sit-110053	Setaria italica	98.69	4.00e-84	303.00
IUUC-Sly-111036	Solanum lycopersicum	98.68	2.00e-83	300.00
IUUC-Stu-112687	Solanum tuberosum	98.68	2.00e-83	300.00
IUUC-Sbi-114343	Sorghum bicolor	98.69	4.00e-84	302.00
IUUC-Ssc-115249	Sus scrofa	97.37	2.00e-82	296.00
IUUC-Tgu-117334	Taeniopygia guttata	97.37	2.00e-82	296.00
IUUC-Tsy-119558	Tarsius syrichta	88.16	2.00e-72	262.00
IUUC-Tni-120338	Tetraodon nigroviridis	97.39	3.00e-83	298.00
IUUC-Tca-121303	Theobroma cacao	98.69	5.00e-84	302.00
IUUC-Tre-122012	Trichoderma reesei	96.08	1.00e-82	297.00
IUUC-Tvi-122369	Trichoderma virens	96.08	1.00e-82	297.00
IUUC-Tae-124009	Triticum aestivum	98.69	3.00e-84	302.00
IUUC-Tur-125981	Triticum urartu	98.69	4.00e-84	303.00
IUUC-Tme-127032	Tuber melanosporum	96.05	3.00e-82	296.00
IUUC-Ttr-128948	Tursiops truncatus	97.37	2.00e-82	296.00
IUUC-Uma-129627	Ustilago maydis	97.37	7.00e-84	301.00
IUUC-Vda-129663	Verticillium dahliae	96.08	7.00e-83	297.00
IUUC-Vvi-131604	Vitis vinifera	98.68	2.00e-83	301.00
IUUC-Xtr-132541	Xenopus tropicalis	97.37	2.00e-82	296.00
IUUC-Yli-134420	Yarrowia lipolytica	96.08	2.00e-82	297.00
IUUC-Zma-135297	Zea mays	98.69	5.00e-84	303.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence