iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099315

Ensembl Protein ID

POPTR_0001s31400.1

UniProt Accession

B9GH94; B9GH94_POPTR

Genbank Protein ID

EEE83530.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_815667; POPTR_0001s31400g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s31400	POPTR_0001s31400.1	POPTR_0001s31400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-35	119.6	270	299
UBD/Beta-Prp	2.80e-54	185.4	11	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H++ vt++++  +d+ +vs+s DgtikvW 
   Q: 270  HSSVVTSVSYhpTDNCMVSASVDGTIKVWK 299
           ***********655999************8 PP

UBD/Beta-Prp

   S: 128  cleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           + + +l+gh+g v  +++++dgn++ s+++Drt+rlW+  +g  ++t ++ h + v+ + ++++   lvs++ d++v +wd+ tg+++r++
   Q: 11   EAN-VLKGHEGGVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKS-HGREVRDVHVTQDNSKLVSCGGDRQVFYWDVATGRVIRKF 99
           444.89*******************************************9.**************************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWdlrsg..dllktlqlhnssvisv 270
           +gh + v+ v+f +    +vs++ D+s+r Wd+rs   ++++ +    +sv+sv
   Q: 100  RGHGSEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHstEPIQIIDTFSDSVMSV 153
           *********************************986114556666666666665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSDVSELPNK EANVLKGHEG GVLAARFNGD GNYCLSCGKD RTIRLWNPHR GIHIKTYKSH 60
GREVRDVHVT QDNSKLVSCG GDRQVFYWDV ATGRVIRKFR GHGSEVNAVK FNEYASVVVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTCTCCCT TCTTCAGACG ACAAAGCTTT CAGCTTTCTT TCCCTTCCCT TTCCCGCCCT 60
GAAAAAACCG AAGAATCAAT CAATCGAGAG AGAGAGGGAG AGAGAGATGA GCGACGTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s31400g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	51.19	4.00e-90	323.00
IUUC-Atr-002647	Amborella trichopoda	83.16	8.00e-155	538.00
IUUC-Aca-004948	Anolis carolinensis	51.93	4.00e-90	323.00
IUUC-Aly-006489	Arabidopsis lyrata	80.60	4.00e-140	489.00
IUUC-Ath-007099	Arabidopsis thaliana	81.69	8.00e-140	488.00
IUUC-Acl-008374	Aspergillus clavatus	36.12	8.00e-49	186.00
IUUC-Afl-008506	Aspergillus flavus	37.92	9.00e-51	193.00
IUUC-Afu-009098	Aspergillus fumigatus	31.37	9.00e-41	160.00
IUUC-Ang-009705	Aspergillus niger	34.45	3.00e-45	174.00
IUUC-Aor-010031	Aspergillus oryzae	37.39	8.00e-51	193.00
IUUC-Ame-011056	Astyanax mexicanus	47.64	2.00e-84	305.00
IUUC-Bgr-012109	Blumeria graminis	38.13	7.00e-46	177.00
IUUC-Bta-012476	Bos taurus	51.53	6.00e-91	326.00
IUUC-Bci-013860	Botrytis cinerea	35.33	2.00e-41	162.00
IUUC-Bdi-014565	Brachypodium distachyon	76.11	3.00e-142	497.00
IUUC-Bol-016204	Brassica oleracea	80.94	8.00e-141	492.00
IUUC-Bra-018093	Brassica rapa	81.08	6.00e-140	489.00
IUUC-Cel-018500	Caenorhabditis elegans	41.81	5.00e-70	256.00
IUUC-Cja-019279	Callithrix jacchus	53.02	5.00e-88	317.00
IUUC-Cfa-020516	Canis familiaris	50.85	1.00e-89	322.00
IUUC-Cpo-021427	Cavia porcellus	50.00	2.00e-85	308.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	53.54	2.00e-95	341.00
IUUC-Csa-023449	Chlorocebus sabaeus	51.96	9.00e-88	316.00
IUUC-Cin-025637	Ciona intestinalis	47.99	3.00e-78	284.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	35.64	7.00e-50	190.00
IUUC-Cne-026994	Cryptococcus neoformans	36.91	6.00e-56	210.00
IUUC-Dre-028239	Danio rerio	49.11	3.00e-83	301.00
IUUC-Dno-029408	Dasypus novemcinctus	50.00	3.00e-89	321.00
IUUC-Dor-030684	Dipodomys ordii	50.77	3.00e-56	211.00
IUUC-Dse-031344	Dothistroma septosporum	39.55	6.00e-45	173.00
IUUC-Dme-031634	Drosophila melanogaster	41.03	2.00e-62	232.00
IUUC-Ete-033126	Echinops telfairi	47.30	3.00e-78	284.00
IUUC-Eca-034356	Equus caballus	44.41	6.00e-73	266.00
IUUC-Eeu-035196	Erinaceus europaeus	51.01	5.00e-41	160.00
IUUC-Fca-036231	Felis catus	51.86	4.00e-90	323.00
IUUC-Fox-038076	Fusarium oxysporum	36.43	2.00e-48	185.00
IUUC-Fso-038093	Fusarium solani	36.03	2.00e-39	155.00
IUUC-Gmo-039056	Gadus morhua	47.78	2.00e-80	291.00
IUUC-Ggr-039981	Gaeumannomyces graminis	37.40	1.00e-40	160.00
IUUC-Gga-041042	Gallus gallus	48.30	2.00e-88	318.00
IUUC-Gac-042638	Gasterosteus aculeatus	47.78	9.00e-82	296.00
IUUC-Gma-042689	Glycine max	89.23	2.00e-160	557.00
IUUC-Ggo-044720	Gorilla gorilla	52.67	3.00e-88	317.00
IUUC-Hsa-046056	Homo sapiens	53.02	8.00e-89	319.00
IUUC-Hvu-047675	Hordeum vulgare	67.68	2.00e-134	471.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	51.19	3.00e-90	324.00
IUUC-Lch-050634	Latimeria chalumnae	50.00	1.00e-79	289.00
IUUC-Lpe-051470	Leersia perrieri	75.17	3.00e-137	480.00
IUUC-Loc-052452	Lepisosteus oculatus	50.00	6.00e-84	303.00
IUUC-Lma-053235	Leptosphaeria maculans	40.00	1.00e-28	119.00
IUUC-Laf-054315	Loxodonta africana	51.96	3.00e-87	314.00
IUUC-Mcc-054923	Macaca mulatta	51.60	5.00e-87	313.00
IUUC-Mor-056936	Magnaporthe oryzae	33.56	4.00e-39	154.00
IUUC-Mtr-058595	Medicago truncatula	88.40	2.00e-156	544.00
IUUC-Mla-058902	Melampsora laricipopulina	40.41	8.00e-64	236.00
IUUC-Mvi-060471	Microbotryum violaceum	42.86	1.00e-71	262.00
IUUC-Mmr-061665	Microcebus murinus	51.70	6.00e-90	323.00
IUUC-Mdo-062750	Monodelphis domestica	52.51	8.00e-75	273.00
IUUC-Mmu-063750	Mus musculus	52.03	1.00e-90	325.00
IUUC-Mac-065441	Musa acuminata	86.05	5.00e-155	539.00
IUUC-Mpu-066863	Mustela putorius furo	50.85	5.00e-90	323.00
IUUC-Mlu-067645	Myotis lucifugus	50.85	4.00e-88	317.00
IUUC-Nfi-068549	Neosartorya fischeri	34.12	5.00e-44	171.00
IUUC-Ncr-068816	Neurospora crassa	30.62	1.00e-31	130.00
IUUC-Nle-069457	Nomascus leucogenys	52.67	3.00e-88	317.00
IUUC-Ont-071674	Oreochromis niloticus	49.11	4.00e-73	267.00
IUUC-Oan-073391	Ornithorhynchus anatinus	51.19	2.00e-90	325.00
IUUC-Ocu-074186	Oryctolagus cuniculus	52.36	1.00e-88	318.00
IUUC-Oba-075414	Oryza barthii	77.08	4.00e-136	476.00
IUUC-Obr-076739	Oryza brachyantha	75.43	2.00e-138	484.00
IUUC-Ogl-076962	Oryza glaberrima	78.16	9.00e-141	491.00
IUUC-Ogu-078831	Oryza glumaepatula	78.16	1.00e-140	491.00
IUUC-Oin-079985	Oryza indica	77.82	2.00e-140	491.00
IUUC-Ome-081333	Oryza meridionalis	77.70	4.00e-128	450.00
IUUC-Oni-082558	Oryza nivara	77.82	2.00e-140	491.00
IUUC-Opu-084091	Oryza punctata	75.84	1.00e-139	488.00
IUUC-Oru-085253	Oryza rufipogon	77.34	1.00e-132	464.00
IUUC-Osa-086077	Oryza sativa	77.82	2.00e-140	491.00
IUUC-Ola-086946	Oryzias latipes	47.78	4.00e-83	300.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.91	7.00e-65	239.00
IUUC-Oga-088681	Otolemur garnettii	50.85	5.00e-89	320.00
IUUC-Oar-089913	Ovis aries	51.54	7.00e-90	323.00
IUUC-Ptr-091343	Pan troglodytes	52.67	2.00e-88	318.00
IUUC-Pan-092078	Papio anubis	51.96	9.00e-88	316.00
IUUC-Psi-093190	Pelodiscus sinensis	51.86	1.00e-89	322.00
IUUC-Pno-095078	Phaeosphaeria nodorum	34.15	3.00e-48	184.00
IUUC-Ppa-095777	Physcomitrella patens	70.07	2.00e-129	454.00
IUUC-Pfo-097153	Poecilia formosa	48.75	2.00e-82	298.00
IUUC-Pab-098307	Pongo abelii	51.96	3.00e-87	314.00
IUUC-Pca-100538	Procavia capensis	53.70	5.00e-84	303.00
IUUC-Ppe-101632	Prunus persica	86.87	3.00e-159	553.00
IUUC-Pva-102484	Pteropus vampyrus	52.38	4.00e-91	327.00
IUUC-Pgr-103495	Puccinia graminis	42.05	1.00e-66	245.00
IUUC-Ptt-103975	Puccinia triticina	42.05	8.00e-67	246.00
IUUC-Pte-104354	Pyrenophora teres	33.80	3.00e-37	148.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	33.45	3.00e-36	145.00
IUUC-Rno-105655	Rattus norvegicus	52.70	2.00e-91	328.00
IUUC-Sha-107130	Sarcophilus harrisii	51.32	2.00e-63	234.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	37.41	3.00e-55	207.00
IUUC-Spo-108131	Schizosaccharomyces pombe	37.45	1.00e-51	196.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	34.65	2.00e-41	162.00
IUUC-Smo-109004	Selaginella moellendorffii	68.94	1.00e-119	421.00
IUUC-Sit-110508	Setaria italica	77.74	1.00e-142	498.00
IUUC-Sly-111093	Solanum lycopersicum	84.69	2.00e-144	504.00
IUUC-Stu-112380	Solanum tuberosum	84.01	2.00e-143	501.00
IUUC-Sar-113127	Sorex araneus	50.00	2.00e-38	152.00
IUUC-Sbi-114461	Sorghum bicolor	76.79	1.00e-141	495.00
IUUC-Sre-115020	Sporisorium reilianum	35.87	4.00e-39	155.00
IUUC-Ssc-115632	Sus scrofa	51.19	2.00e-90	324.00
IUUC-Tru-118039	Takifugu rubripes	45.45	5.00e-75	273.00
IUUC-Tsy-119239	Tarsius syrichta	51.88	1.00e-46	179.00
IUUC-Tni-120097	Tetraodon nigroviridis	46.13	1.00e-73	269.00
IUUC-Tca-121695	Theobroma cacao	87.54	6.00e-159	552.00
IUUC-Tre-122182	Trichoderma reesei	35.86	1.00e-44	173.00
IUUC-Tvi-122429	Trichoderma virens	35.71	6.00e-46	177.00
IUUC-Tae-125136	Triticum aestivum	74.07	2.00e-139	487.00
IUUC-Tur-126216	Triticum urartu	74.74	9.00e-139	485.00
IUUC-Tme-127030	Tuber melanosporum	42.12	7.00e-65	239.00
IUUC-Tbe-127686	Tupaia belangeri	48.60	4.00e-48	184.00
IUUC-Ttr-128770	Tursiops truncatus	50.68	9.00e-89	319.00
IUUC-Uma-129446	Ustilago maydis	34.92	2.00e-39	157.00
IUUC-Vda-129680	Verticillium dahliae	36.90	1.00e-38	152.00
IUUC-Vvi-131292	Vitis vinifera	88.89	3.00e-161	560.00
IUUC-Xtr-132204	Xenopus tropicalis	50.68	4.00e-90	323.00
IUUC-Xma-133727	Xiphophorus maculatus	48.40	7.00e-81	293.00
IUUC-Zma-135908	Zea mays	76.11	1.00e-130	458.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence