iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099000

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_244304; POPTR_0014s07380g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s07380	POPTR_0014s07380.1	POPTR_0014s07380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-22	80.1	374	409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ vtcla  + + l sGs D ti+vWDl+t  ++
   Q: 374  GHTGAVTCLAV-GaKWLYSGSADSTIRVWDLDTLQCI 409
           8********99.6689***************999887 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEIKTLTVRN HTRVGGRGGG SAKNNAVCYF WKEGKCNRNP CRFLHTDSPA PNIYHRNFKQ 60
SQASKDQLKK SLKYALGENT RGGSLEDKSN KSRLSFNYED LPRKCPLYIS KNWSILKTGS 120

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Nucleotide Sequence
(Fasta)

AAGAAGCTCT CTCTCACTAT ATCAGGTTTG TCCGCGTATC TCTCTGTCGC TACGATCGCT 60
CGGTCAATCG CCTCGTTTAC CGCCACGATG TCGACGACCG GTTTCAATTA TCAATGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

pop:POPTR_0014s07380g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence