iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000000712.1	ENSONIT00000000897.1	ENSONIP00000000898.1
ENSONIG00000000712.1	ENSONIT00000000898.1	ENSONIP00000000899.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-13	49.2	597	628
UBD/SH3	5.70e-12	45.8	1045	1098

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH   v++l++  +d+ l+s+s Dgt++ W++
   Q: 597  GHLKIVYDLCWsrDDRSLLSASSDGTVREWNV 628
           78899*******55599**********97776 PP

UBD/SH3

   S: 4    ekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFve 60
           ++v  lydy+a+ +deLt+++Gdv++v+  ++ +e+W+ g +  +g++G f + +v+
   Q: 1045 QVVVSLYDYKANRSDELTIRRGDVIQVL--YKDNENWWFG-RLENGQQGYFLASYVA 1098
           67899***********************..999*******.599*****99888876 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MPAGESEDRA KTRERFNEVF KKYTESEKKT LKKKSTETPE TIVLQNLKKN LNLEKDTEDN 60
ETILQNTYDP EEGSPRYTKN KRREREISEK VNFNNNRNQE EIKTSKSKRK SKRDLPSPPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTTGTTGA CTTGGAAACC GTCGAAGCGT TGTTGTTAAA GATGGAGGAC AGCACAATCA 60
CTGCAGAGTA GATACATGCG CTAACCCTCG GCCAACTCTT CTGCTTCTTA TACATACTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR001452--SH3_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50002--SH3
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00018--SH3_1
PF00400--WD40

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3
SM00320--WD40

Gene Ontology

GO:0007368--P:determination of left/right symmetry
GO:0044458--P:motile cilium assembly
GO:0071599--P:otic vesicle development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001943	Ailuropoda melanoleuca	54.61	0.00e+00	786.00
IUUC-Apl-004057	Anas platyrhynchos	57.78	0.00e+00	850.00
IUUC-Aca-004306	Anolis carolinensis	54.70	0.00e+00	905.00
IUUC-Ame-010981	Astyanax mexicanus	59.97	0.00e+00	1327.00
IUUC-Bta-013129	Bos taurus	49.59	0.00e+00	845.00
IUUC-Cja-018979	Callithrix jacchus	53.58	0.00e+00	768.00
IUUC-Cfa-020121	Canis familiaris	54.32	0.00e+00	787.00
IUUC-Cpo-022219	Cavia porcellus	50.00	0.00e+00	707.00
IUUC-Csa-023991	Chlorocebus sabaeus	48.67	0.00e+00	847.00
IUUC-Cho-024782	Choloepus hoffmanni	60.78	1.00e-135	478.00
IUUC-Cin-025149	Ciona intestinalis	43.23	6.00e-154	538.00
IUUC-Csv-026188	Ciona savignyi	41.45	4.00e-132	464.00
IUUC-Dre-028737	Danio rerio	65.53	0.00e+00	1175.00
IUUC-Dno-029756	Dasypus novemcinctus	49.46	0.00e+00	809.00
IUUC-Dor-030821	Dipodomys ordii	44.44	6.00e-165	575.00
IUUC-Ete-032237	Echinops telfairi	48.81	0.00e+00	835.00
IUUC-Eca-033491	Equus caballus	49.94	0.00e+00	846.00
IUUC-Eeu-034812	Erinaceus europaeus	42.98	4.00e-115	409.00
IUUC-Fca-035868	Felis catus	48.99	0.00e+00	831.00
IUUC-Fal-037571	Ficedula albicollis	58.67	0.00e+00	733.00
IUUC-Gmo-039358	Gadus morhua	66.63	0.00e+00	1126.00
IUUC-Gga-040233	Gallus gallus	58.87	0.00e+00	841.00
IUUC-Gac-041744	Gasterosteus aculeatus	74.80	0.00e+00	1381.00
IUUC-Ggo-044766	Gorilla gorilla	48.93	0.00e+00	838.00
IUUC-Hsa-046660	Homo sapiens	48.20	0.00e+00	839.00
IUUC-Itr-048282	Ictidomys tridecemlineatus	49.11	0.00e+00	848.00
IUUC-Loc-052658	Lepisosteus oculatus	62.50	0.00e+00	1235.00
IUUC-Laf-053564	Loxodonta africana	53.49	0.00e+00	773.00
IUUC-Mcc-055480	Macaca mulatta	49.13	0.00e+00	855.00
IUUC-Meu-056362	Macropus eugenii	53.75	0.00e+00	719.00
IUUC-Mga-060033	Meleagris gallopavo	53.90	0.00e+00	912.00
IUUC-Mmr-061075	Microcebus murinus	49.19	0.00e+00	850.00
IUUC-Mdo-062818	Monodelphis domestica	54.73	0.00e+00	976.00
IUUC-Mmu-063987	Mus musculus	48.53	0.00e+00	823.00
IUUC-Mpu-066242	Mustela putorius furo	53.86	0.00e+00	781.00
IUUC-Mlu-067123	Myotis lucifugus	49.05	0.00e+00	811.00
IUUC-Nle-069793	Nomascus leucogenys	48.54	0.00e+00	844.00
IUUC-Opr-071110	Ochotona princeps	54.78	9.00e-113	402.00
IUUC-Oan-073201	Ornithorhynchus anatinus	60.29	1.00e-119	422.00
IUUC-Ocu-074224	Oryctolagus cuniculus	47.50	0.00e+00	852.00
IUUC-Ola-086818	Oryzias latipes	75.12	1.00e-100	358.00
IUUC-Oga-088338	Otolemur garnettii	49.53	0.00e+00	845.00
IUUC-Oar-089247	Ovis aries	55.11	0.00e+00	790.00
IUUC-Ptr-090830	Pan troglodytes	48.90	0.00e+00	851.00
IUUC-Pan-092469	Papio anubis	48.90	0.00e+00	851.00
IUUC-Psi-093183	Pelodiscus sinensis	54.45	0.00e+00	980.00
IUUC-Pma-094415	Petromyzon marinus	48.71	2.00e-156	545.00
IUUC-Pfo-096577	Poecilia formosa	68.11	0.00e+00	1385.00
IUUC-Pab-098236	Pongo abelii	53.27	0.00e+00	763.00
IUUC-Pca-100560	Procavia capensis	38.38	7.00e-148	518.00
IUUC-Pva-102565	Pteropus vampyrus	56.50	0.00e+00	759.00
IUUC-Rno-104881	Rattus norvegicus	48.11	0.00e+00	818.00
IUUC-Sha-106577	Sarcophilus harrisii	54.89	6.00e-131	460.00
IUUC-Sar-113265	Sorex araneus	45.20	0.00e+00	713.00
IUUC-Ssc-116174	Sus scrofa	47.90	0.00e+00	826.00
IUUC-Tgu-116618	Taeniopygia guttata	56.20	0.00e+00	797.00
IUUC-Tru-117761	Takifugu rubripes	63.74	0.00e+00	1113.00
IUUC-Tsy-119557	Tarsius syrichta	60.90	3.00e-128	453.00
IUUC-Tni-119782	Tetraodon nigroviridis	70.98	0.00e+00	1181.00
IUUC-Tbe-127529	Tupaia belangeri	67.37	2.00e-36	148.00
IUUC-Ttr-128444	Tursiops truncatus	53.06	0.00e+00	746.00
IUUC-Vpa-130337	Vicugna pacos	44.00	0.00e+00	689.00
IUUC-Xtr-132055	Xenopus tropicalis	57.99	0.00e+00	736.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence