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Tag Content
UUCD2 ID IUUC-Dre-027947
UUCD1 version UUC-DaR-01085
Ensembl Protein ID ENSDARP00000008458.5
UniProt Accession P22574; O42369; Q8AWY6; Q9PWL9; HXB4A_DANRE
Genbank Protein ID AAD15945.1; CAD59115.1; AAA56866.1; CAA74284.1
Protein Name Homeobox protein Hox-B4a; Homeobox protein Zf-13
Genbank Nucleotide ID AF071252; AL645782; M24085; Y13946
Gene Name hoxb4a; hox-b4; hoxb4; zf13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000013533.7 ENSDART00000012470.6 ENSDARP00000008458.5
ENSDARG00000013533.7 ENSDART00000151584.1 ENSDARP00000125694.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/Other 65.65 1.00e-70 263.00 IUUC-Hsa-046919
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Danio rerio
Functional Description
(View)

Functional Description


     First expressed at the 1-somite stage with an anterior expression limit in rhombomere 7 (r7) of the developing hindbrain. By the 15-somite stage, the anterior expression limit is at the r6/r7 boundary and this is maintained until at least 30 hours of development. At the 10-somite stage, weakly expressed in the paraxial mesoderm with an anterior expression limit at somite 1.
 First expressed at the 1-somite stage with an anterior expression limit in rhombomere 7 (r7) of the developing hindbrain. By the 15-somite stage, the anterior expression limit is at the r6/r7 boundary and this is maintained until at least 30 hours of development. At the 10-somite stage, weakly expressed in the paraxial mesoderm with an anterior expression limit at somite 1.
Protein Sequence
(Fasta)
MAMSSYLINS NYVDPKFPPC EEYSQSDYLP SHSPDYYSAQ RQDPSFQHES IYHQRSGCAD 60
PPYSSCQGPG QPAAVISPRG HVLPTTALST PLPEPSHHCD SVTPSPPPAC GQTPTSQNTS 120
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Protein Fasta Sequence


>IUUC-Dre-027947|E3,Cullin RING/Other|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACCAGTAGGC CACTACAGTG CCAGTGTCTA GTCAGTGAAT GTCTCTCCGG TTCTACCCAT 60
TTGAAAGCGG AAATATGGAT ACTGAACCGT GTACACTCAA AGTAAGTTCA TTTTAAGTCT 120
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Nucleotide Fasta Sequence


>IUUC-Dre-027947|E3,Cullin RING/Other|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0238--DNA-binding
KW-0371--Homeobox
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
Interpro

IPR009057--Homeobox-like
IPR017995--Homeobox_antennapedia
IPR001827--Homeobox_Antennapedia_CS
IPR017970--Homeobox_CS
IPR001356--Homeobox_dom
IPR020479--Homeobox_metazoa
PROSITE

PS00032--ANTENNAPEDIA
PS00027--HOMEOBOX_1
PS50071--HOMEOBOX_2
Pfam

PF00046--Homeobox
PRINTS

PR00025--ANTENNAPEDIA
PR00024--HOMEOBOX
SMART

SM00389--HOX
Gene Ontology

GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0007275--P:multicellular organism development
GO:0006351--P:transcription, DNA-templated
KEGG dre:30340
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002156 Ailuropoda melanoleuca 57.38 6.00e-64 237.00
IUUC-Aca-004281 Anolis carolinensis 69.08 1.00e-92 332.00
IUUC-Ame-011424 Astyanax mexicanus 88.21 2.00e-118 418.00
IUUC-Bta-013580 Bos taurus 64.94 4.00e-72 264.00
IUUC-Bdi-014316 Brachypodium distachyon 44.26 2.00e-09 57.00
IUUC-Bra-017918 Brassica rapa 47.46 1.00e-09 57.00
IUUC-Cja-019422 Callithrix jacchus 67.12 6.00e-76 276.00
IUUC-Cfa-020551 Canis familiaris 66.23 8.00e-75 273.00
IUUC-Cpo-022099 Cavia porcellus 83.64 3.00e-50 191.00
IUUC-Csa-023337 Chlorocebus sabaeus 64.35 2.00e-70 258.00
IUUC-Dno-029094 Dasypus novemcinctus 62.01 3.00e-68 251.00
IUUC-Dme-031651 Drosophila melanogaster 29.82 8.40e-01 31.20
IUUC-Fca-035652 Felis catus 61.26 3.00e-66 244.00
IUUC-Gac-041606 Gasterosteus aculeatus 68.60 3.00e-93 334.00
IUUC-Hsa-046919 Homo sapiens 64.19 9.00e-70 256.00
IUUC-Itr-048677 Ictidomys tridecemlineatus 65.82 2.00e-76 279.00
IUUC-Lch-050353 Latimeria chalumnae 72.98 8.00e-98 349.00
IUUC-Laf-053406 Loxodonta africana 64.94 8.00e-73 266.00
IUUC-Meu-056129 Macropus eugenii 68.40 5.00e-84 303.00
IUUC-Mdo-062656 Monodelphis domestica 68.40 2.00e-85 308.00
IUUC-Mmu-064317 Mus musculus 66.38 5.00e-75 273.00
IUUC-Mpu-066715 Mustela putorius furo 64.50 7.00e-71 259.00
IUUC-Nle-069403 Nomascus leucogenys 63.76 2.00e-71 262.00
IUUC-Ont-072022 Oreochromis niloticus 73.36 6.00e-97 346.00
IUUC-Oan-073355 Ornithorhynchus anatinus 70.59 7.00e-79 286.00
IUUC-Obr-076254 Oryza brachyantha 43.33 5.00e-08 51.60
IUUC-Oga-089067 Otolemur garnettii 64.35 4.00e-73 267.00
IUUC-Oar-089454 Ovis aries 62.90 5.00e-71 260.00
IUUC-Ptr-091405 Pan troglodytes 64.19 9.00e-70 256.00
IUUC-Pan-092634 Papio anubis 64.35 2.00e-70 258.00
IUUC-Psi-093940 Pelodiscus sinensis 68.83 3.00e-92 331.00
IUUC-Pfo-097180 Poecilia formosa 75.55 3.00e-87 314.00
IUUC-Pab-097837 Pongo abelii 64.19 1.00e-69 256.00
IUUC-Pva-102648 Pteropus vampyrus 66.23 4.00e-74 270.00
IUUC-Rno-106098 Rattus norvegicus 65.95 5.00e-74 270.00
IUUC-Sha-107548 Sarcophilus harrisii 68.00 2.00e-83 301.00
IUUC-Sly-111303 Solanum lycopersicum 42.86 6.00e-09 54.70
IUUC-Ssc-116419 Sus scrofa 64.19 8.00e-70 256.00
IUUC-Tru-118619 Takifugu rubripes 79.15 1.00e-98 352.00
IUUC-Tni-120889 Tetraodon nigroviridis 76.17 9.00e-92 330.00
IUUC-Ttr-128475 Tursiops truncatus 64.50 7.00e-71 260.00
Created Date 25-Jun-2017

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