iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050193

Ensembl Protein ID

ENSLACP00000016573.2

UniProt Accession

H3B3V2; H3B3V2_LATCH

Genbank Protein ID

ENSLACP00000016573

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01027671

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000014606.2	ENSLACT00000016687.2	ENSLACP00000016573.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.10e-16	60.6	184	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP ++k++L+++++
   Q: 184  MEKFW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVAIKSHLKSFSM 231
           67899.**********************888...***************976 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MRGRMGTQGS PVKSYDYLLK FLLVGDSDVG KGEILESLQD GASESPYAYS NGIDYKTTTI 60
LLDGRRVKLE LWDTSGQGRF CTIFRSYSRG AQGILLVYDI TNRWSFDGID RWIKEIDEHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCAGGAACT CGGTAGTCAG TAGAAGTCGG TCAGTTACCC CGGGGTCTCA TCGAAAACAG 60
ATTAGTTCGT TATCCATTTG TTTGTTTTTG TTTTTTTAAA TGCGGGTCTT TTGCAAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

KEGG

lcm:102365382

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	93.68	2.00e-141	494.00
IUUC-Apl-003799	Anas platyrhynchos	89.26	5.00e-128	449.00
IUUC-Aca-005004	Anolis carolinensis	82.16	1.00e-130	458.00
IUUC-Ame-011203	Astyanax mexicanus	95.04	2.00e-163	567.00
IUUC-Bta-013490	Bos taurus	93.95	4.00e-148	516.00
IUUC-Cja-019990	Callithrix jacchus	93.26	3.00e-146	510.00
IUUC-Cfa-020527	Canis familiaris	77.14	2.00e-102	365.00
IUUC-Cpo-022437	Cavia porcellus	93.41	3.00e-140	490.00
IUUC-Csa-024147	Chlorocebus sabaeus	93.59	1.00e-147	515.00
IUUC-Cho-024716	Choloepus hoffmanni	75.61	4.00e-76	276.00
IUUC-Dre-027427	Danio rerio	95.34	6.00e-161	559.00
IUUC-Dno-029998	Dasypus novemcinctus	88.98	3.00e-114	406.00
IUUC-Dor-030584	Dipodomys ordii	84.12	2.00e-106	377.00
IUUC-Dme-031810	Drosophila melanogaster	59.49	8.00e-95	339.00
IUUC-Ete-033080	Echinops telfairi	91.81	2.00e-140	491.00
IUUC-Eca-033423	Equus caballus	93.59	2.00e-123	434.00
IUUC-Eeu-034590	Erinaceus europaeus	86.21	1.00e-109	388.00
IUUC-Fca-035697	Felis catus	93.16	6.00e-121	426.00
IUUC-Fal-037070	Ficedula albicollis	93.59	5.00e-148	516.00
IUUC-Gmo-039605	Gadus morhua	94.27	4.00e-159	553.00
IUUC-Gga-040343	Gallus gallus	93.59	5.00e-148	516.00
IUUC-Gac-041833	Gasterosteus aculeatus	89.16	1.00e-146	511.00
IUUC-Ggo-045131	Gorilla gorilla	86.12	2.00e-130	457.00
IUUC-Hsa-046237	Homo sapiens	93.59	1.00e-147	515.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	93.95	4.00e-148	516.00
IUUC-Loc-052243	Lepisosteus oculatus	95.41	2.00e-163	567.00
IUUC-Laf-054435	Loxodonta africana	92.53	2.00e-147	514.00
IUUC-Mcc-055337	Macaca mulatta	93.24	1.00e-146	511.00
IUUC-Meu-056731	Macropus eugenii	89.82	3.00e-77	281.00
IUUC-Mga-059204	Meleagris gallopavo	81.36	4.00e-142	496.00
IUUC-Mmr-061380	Microcebus murinus	93.55	5.00e-147	513.00
IUUC-Mdo-062438	Monodelphis domestica	93.68	2.00e-150	524.00
IUUC-Mmu-064046	Mus musculus	94.31	4.00e-148	516.00
IUUC-Mpu-066029	Mustela putorius furo	93.13	4.00e-123	433.00
IUUC-Mlu-067741	Myotis lucifugus	93.62	4.00e-148	516.00
IUUC-Nle-069240	Nomascus leucogenys	87.54	1.00e-134	471.00
IUUC-Opr-070662	Ochotona princeps	76.26	2.00e-131	461.00
IUUC-Ont-071248	Oreochromis niloticus	95.34	1.00e-160	558.00
IUUC-Oan-073432	Ornithorhynchus anatinus	91.49	4.00e-119	419.00
IUUC-Ocu-074559	Oryctolagus cuniculus	78.06	4.00e-130	456.00
IUUC-Olo-080270	Oryza longistaminata	34.41	5.00e-12	65.50
IUUC-Ola-086486	Oryzias latipes	87.41	3.00e-144	503.00
IUUC-Oga-088293	Otolemur garnettii	93.59	4.00e-148	516.00
IUUC-Oar-089702	Ovis aries	77.39	5.00e-112	396.00
IUUC-Ptr-090720	Pan troglodytes	93.59	1.00e-147	515.00
IUUC-Pan-091732	Papio anubis	93.59	1.00e-147	515.00
IUUC-Psi-093627	Pelodiscus sinensis	92.53	3.00e-140	490.00
IUUC-Pma-094679	Petromyzon marinus	77.97	3.00e-111	394.00
IUUC-Pfo-097105	Poecilia formosa	95.70	4.00e-161	560.00
IUUC-Pab-098054	Pongo abelii	93.59	1.00e-147	515.00
IUUC-Pca-100775	Procavia capensis	89.64	5.00e-87	312.00
IUUC-Pva-102658	Pteropus vampyrus	93.24	5.00e-147	513.00
IUUC-Rno-105303	Rattus norvegicus	94.31	4.00e-148	516.00
IUUC-Sha-106536	Sarcophilus harrisii	93.68	2.00e-150	524.00
IUUC-Sar-113518	Sorex araneus	72.83	1.00e-112	398.00
IUUC-Ssc-115719	Sus scrofa	76.01	1.00e-128	452.00
IUUC-Tgu-116858	Taeniopygia guttata	98.96	7.00e-113	399.00
IUUC-Tru-118264	Takifugu rubripes	78.44	6.00e-148	516.00
IUUC-Tsy-119011	Tarsius syrichta	77.37	4.00e-93	333.00
IUUC-Tni-120350	Tetraodon nigroviridis	94.62	2.00e-159	554.00
IUUC-Ttr-129236	Tursiops truncatus	94.31	1.00e-149	521.00
IUUC-Xtr-132079	Xenopus tropicalis	81.36	7.00e-143	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence