iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115384

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU207233

Gene Name

WDR47

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000006840.2	ENSSSCT00000007491.2	ENSSSCP00000007295.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-28	97.8	754	790
UBD/Beta-Prp	4.40e-58	197.1	658	916

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ + +l  +s+++++sGs D+t++ WDlr   ++
   Q: 754  GHTGHILALYtWSGWMIASGSQDKTVRFWDLRVPSCV 790
           89999***966977*****************988887 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk....ilvtgse.Drtikvwdlstg 84
           ++hhk+ i+cv++sp ++llatgs d+ +kv  +  +++       ++s h+++++++ f +  +    il++++  D +i+  d + g
   Q: 658  NKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCnatgpDLEFSMHDGTIRDLAFMEGPEsggaILISAGAgDCNIYTTDCQRG 746
           68*****************************99999999889888899************987667778777765516788888***** PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           + +h+l+gh+  +l+l     g  ++sGs+d+t+r wdl+  +c++    t+ g+ ++v +v+v+p+g+ll++G  D+ ++l+d++ g+
   Q: 747  QGLHALSGHTGHILALYTWS-GWMIASGSQDKTVRFWDLRVPSCVRVvgtTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGR 834
           **************997777.9***********************99999*************************************** PP
   S: 171  llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +++     h ++v+s+ f++   +l++gs+d ++k+ dlq    ++  ++ + +h+d v + r + +d  ++s s+D+++ +W
   Q: 835  MVQSYHP-HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQgdltKQLPIMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLW 916
           *****98.********************************99977788*********************************** PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MTAEETVNVK EVEIIKLILD FLNSKKLHIS MLALEKESGV INGLFSDDML FLRQLILDGQ 60
WDEVLQFIQP LECMEKFDKK RFRYIILKQK FLEALCVNNA MSAEDEPQHL EFTMQEAVQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGCTGAGGC TCGGGGCTGG TGCTGGGCTC CGGCGCCGCT TGACAACCGC AGTCGGCTAG 60
AGGCTGAGCT GAGCGGTCGC GGGGCCGGGA GGGGCAGACG GGAGGAAGGA CGCACTGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

ssc:100155903

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001519	Ailuropoda melanoleuca	97.09	0.00e+00	1633.00
IUUC-Apl-003954	Anas platyrhynchos	90.90	0.00e+00	1541.00
IUUC-Aca-004766	Anolis carolinensis	88.50	0.00e+00	1479.00
IUUC-Ame-010725	Astyanax mexicanus	70.25	0.00e+00	1135.00
IUUC-Bta-013072	Bos taurus	95.05	0.00e+00	1592.00
IUUC-Cel-018667	Caenorhabditis elegans	48.33	5.00e-94	338.00
IUUC-Cja-018835	Callithrix jacchus	96.01	0.00e+00	1612.00
IUUC-Cfa-020380	Canis familiaris	95.61	0.00e+00	993.00
IUUC-Cpo-021883	Cavia porcellus	95.66	0.00e+00	1584.00
IUUC-Csa-023467	Chlorocebus sabaeus	97.28	0.00e+00	1636.00
IUUC-Cho-024342	Choloepus hoffmanni	87.70	0.00e+00	1470.00
IUUC-Cin-025112	Ciona intestinalis	43.89	1.00e-72	266.00
IUUC-Dre-027530	Danio rerio	76.71	0.00e+00	1250.00
IUUC-Dno-029290	Dasypus novemcinctus	97.39	0.00e+00	1633.00
IUUC-Dor-030258	Dipodomys ordii	82.54	0.00e+00	1348.00
IUUC-Dme-032040	Drosophila melanogaster	52.73	1.00e-102	365.00
IUUC-Ete-032248	Echinops telfairi	89.78	0.00e+00	759.00
IUUC-Eca-033623	Equus caballus	97.18	0.00e+00	1623.00
IUUC-Fca-036425	Felis catus	95.74	0.00e+00	1448.00
IUUC-Fal-036661	Ficedula albicollis	90.23	0.00e+00	1520.00
IUUC-Gmo-039527	Gadus morhua	74.70	0.00e+00	1221.00
IUUC-Gga-041177	Gallus gallus	90.45	0.00e+00	1516.00
IUUC-Gac-042049	Gasterosteus aculeatus	73.54	0.00e+00	1234.00
IUUC-Ggo-044833	Gorilla gorilla	96.12	0.00e+00	1620.00
IUUC-Hsa-046084	Homo sapiens	96.34	0.00e+00	1623.00
IUUC-Lch-050313	Latimeria chalumnae	80.45	0.00e+00	1382.00
IUUC-Loc-051790	Lepisosteus oculatus	81.63	0.00e+00	1402.00
IUUC-Laf-053521	Loxodonta africana	95.99	0.00e+00	1597.00
IUUC-Mcc-055053	Macaca mulatta	97.17	0.00e+00	1635.00
IUUC-Meu-056734	Macropus eugenii	94.04	0.00e+00	692.00
IUUC-Mga-059381	Meleagris gallopavo	90.59	0.00e+00	1522.00
IUUC-Mmr-060859	Microcebus murinus	96.55	0.00e+00	1625.00
IUUC-Mdo-062501	Monodelphis domestica	92.69	0.00e+00	1462.00
IUUC-Mmu-063126	Mus musculus	95.01	0.00e+00	1573.00
IUUC-Mpu-066718	Mustela putorius furo	96.97	0.00e+00	1283.00
IUUC-Mlu-067246	Myotis lucifugus	96.53	0.00e+00	1605.00
IUUC-Nle-069807	Nomascus leucogenys	96.44	0.00e+00	1625.00
IUUC-Opr-070862	Ochotona princeps	86.87	3.00e-65	243.00
IUUC-Ont-072519	Oreochromis niloticus	76.24	0.00e+00	1249.00
IUUC-Oan-072740	Ornithorhynchus anatinus	89.62	0.00e+00	787.00
IUUC-Ocu-074898	Oryctolagus cuniculus	97.17	0.00e+00	1614.00
IUUC-Ola-086396	Oryzias latipes	76.23	0.00e+00	1281.00
IUUC-Oga-088563	Otolemur garnettii	95.69	0.00e+00	1606.00
IUUC-Oar-089926	Ovis aries	97.72	0.00e+00	1639.00
IUUC-Ptr-090706	Pan troglodytes	96.23	0.00e+00	1623.00
IUUC-Pan-091740	Papio anubis	97.28	0.00e+00	1636.00
IUUC-Psi-093938	Pelodiscus sinensis	89.97	0.00e+00	1527.00
IUUC-Pfo-096531	Poecilia formosa	75.83	0.00e+00	1249.00
IUUC-Pab-098312	Pongo abelii	96.85	0.00e+00	1632.00
IUUC-Pca-101100	Procavia capensis	91.20	0.00e+00	734.00
IUUC-Pva-102734	Pteropus vampyrus	92.47	0.00e+00	732.00
IUUC-Rno-105625	Rattus norvegicus	95.23	0.00e+00	1561.00
IUUC-Sha-106999	Sarcophilus harrisii	90.48	0.00e+00	1488.00
IUUC-Sar-112988	Sorex araneus	84.66	0.00e+00	1160.00
IUUC-Tgu-116808	Taeniopygia guttata	90.14	0.00e+00	1505.00
IUUC-Tru-118233	Takifugu rubripes	74.73	0.00e+00	1215.00
IUUC-Tsy-119509	Tarsius syrichta	99.20	0.00e+00	681.00
IUUC-Tni-120473	Tetraodon nigroviridis	74.07	0.00e+00	1241.00
IUUC-Tbe-127447	Tupaia belangeri	91.05	2.00e-146	512.00
IUUC-Ttr-128459	Tursiops truncatus	94.69	0.00e+00	1511.00
IUUC-Vpa-130258	Vicugna pacos	92.24	0.00e+00	993.00
IUUC-Xtr-132609	Xenopus tropicalis	79.16	0.00e+00	1316.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence