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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Sce-106178
UUCD1 version UUC-SaC-00253
Ensembl Protein ID YDR092W
UniProt Accession P52490; D6VS79; UBC13_YEAST
Genbank Protein ID CAA67806.1; CAA90451.1; DAA11939.1
Protein Name Ubiquitin-conjugating enzyme E2 13; E2 ubiquitin-conjugating enzyme 13; Ubiquitin carrier protein 13; Ubiquitin-protein ligase 13
Genbank Nucleotide ID X99443; Z50111; BK006938
Gene Name UBC13; YDR092W; YD6652.04
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YDR092W YDR092W YDR092W
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDiRefIndexHINTMentha
Protein 3D Structure
PDBMMDB
Post-translational Modifications (PTMs)
CPLMBioGRID
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E2/UBC E2_UBC 20463880
Classification
Family E-value Score Start End
E2/UBC 1.30e-49 166.0 7 141
Active Site
Position(s) Description Evidence
87 Glycyl thioester intermediate N/A
Domain Profile

   E2/UBC
   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspalsvesvl 102
           R+ ke+++l +dp++gi+a+p+d+ +l  ++v+i+Gpe++pYe+g+F+le+++p+dYP+++Pkv+fltki+hPn+++ G++Cl++lk  ++Wspal++++vl
   Q: 7    RIIKETEKLVSDPVPGITAEPHDD-NLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLK--TNWSPALQIRTVL 105
           899*********************.9************************************************************9..************* PP
   S: 103  lsiqsllaepnpesplneeaaellkknreeykkkvr 138
           lsiq+lla+pnp++pl +++ae + kn++  k k+r
   Q: 106  LSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAR 141
           ***************************998887776 PP
   
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description


     S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine + [E2 ubiquitin-conjugating enzyme]-L-cysteine = [E1 ubiquitin-activating enzyme]-L-cysteine + S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine.
 S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine + [E2 ubiquitin-conjugating enzyme]-L-cysteine = [E1 ubiquitin-activating enzyme]-L-cysteine + S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine.
Protein Sequence
(Fasta)
MASLPKRIIK ETEKLVSDPV PGITAEPHDD NLRYFQVTIE GPEQSPYEDG IFELELYLPD 60
DYPMEAPKVR FLTKIYHPNI DRLGRICLDV LKTNWSPALQ IRTVLLSIQA LLASPNPNDP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sce-106178|E2,E2/UBC|Saccharomyces cerevisiae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCATCAT TACCCAAGAG AATAATCAAG GTATGTTCAA ACAAGAGCAG TGGATTATAT 60
ACGAAATCTG AAGTGACGTT TTCGTCTGAG CCGTCACACT CTACACTGTT TCCTCTTGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sce-106178|E2,E2/UBC|Saccharomyces cerevisiae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0067--ATP-binding
KW-0181--Complete proteome
KW-1017--Isopeptide bond
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway
Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD
PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2
Pfam

PF00179--UQ_con
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0031371--C:ubiquitin conjugating enzyme complex
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0010994--P:free ubiquitin chain polymerization
GO:0006301--P:postreplication repair
GO:0070534--P:protein K63-linked ubiquitination
GO:0006513--P:protein monoubiquitination
GO:0000209--P:protein polyubiquitination
KEGG sce:YDR092W
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000100 Aegilops tauschii 68.03 3.00e-60 221.00
IUUC-Aml-001889 Ailuropoda melanoleuca 67.61 5.00e-58 214.00
IUUC-Atr-002818 Amborella trichopoda 69.86 1.00e-61 226.00
IUUC-Apl-003469 Anas platyrhynchos 68.31 6.00e-59 217.00
IUUC-Aca-005051 Anolis carolinensis 70.27 3.00e-62 228.00
IUUC-Aly-006258 Arabidopsis lyrata 68.71 2.00e-61 225.00
IUUC-Ath-007639 Arabidopsis thaliana 68.71 4.00e-61 224.00
IUUC-Ago-007837 Ashbya gossypii 85.23 3.00e-64 234.00
IUUC-Acl-008263 Aspergillus clavatus 73.97 9.00e-65 236.00
IUUC-Afl-008733 Aspergillus flavus 73.97 3.00e-64 234.00
IUUC-Afu-008946 Aspergillus fumigatus 73.97 9.00e-65 236.00
IUUC-Ani-009482 Aspergillus nidulans 75.00 2.00e-65 238.00
IUUC-Ang-009678 Aspergillus niger 73.97 6.00e-64 233.00
IUUC-Aor-010025 Aspergillus oryzae 73.97 3.00e-64 234.00
IUUC-Ate-010254 Aspergillus terreus 73.97 2.00e-64 235.00
IUUC-Ame-010742 Astyanax mexicanus 68.63 4.00e-62 227.00
IUUC-Bgr-012156 Blumeria graminis 64.00 2.00e-53 199.00
IUUC-Bta-012636 Bos taurus 70.27 3.00e-62 228.00
IUUC-Bci-013761 Botrytis cinerea 73.65 8.00e-64 233.00
IUUC-Bdi-014796 Brachypodium distachyon 68.03 6.00e-61 224.00
IUUC-Bol-016613 Brassica oleracea 68.03 6.00e-61 224.00
IUUC-Bra-016938 Brassica rapa 68.03 6.00e-61 224.00
IUUC-Cel-018119 Caenorhabditis elegans 66.89 4.00e-59 218.00
IUUC-Cja-019108 Callithrix jacchus 70.27 3.00e-62 228.00
IUUC-Cfa-020561 Canis familiaris 69.59 1.00e-61 226.00
IUUC-Cpo-022280 Cavia porcellus 66.67 3.00e-58 214.00
IUUC-Cre-022978 Chlamydomonas reinhardtii 70.27 7.00e-62 227.00
IUUC-Csa-023860 Chlorocebus sabaeus 64.19 2.00e-55 205.00
IUUC-Cho-024459 Choloepus hoffmanni 70.27 3.00e-62 228.00
IUUC-Cin-025278 Ciona intestinalis 65.75 4.00e-59 218.00
IUUC-Csv-025952 Ciona savignyi 61.64 1.00e-51 192.00
IUUC-Cgl-026752 Colletotrichum gloeosporioides 71.81 4.00e-64 234.00
IUUC-Cne-026809 Cryptococcus neoformans 69.40 1.00e-55 206.00
IUUC-Cme-027100 Cyanidioschyzon merolae 65.54 3.00e-56 208.00
IUUC-Dre-027931 Danio rerio 68.63 4.00e-62 228.00
IUUC-Dno-030059 Dasypus novemcinctus 69.59 3.00e-61 224.00
IUUC-Dor-030269 Dipodomys ordii 70.63 4.00e-53 197.00
IUUC-Dse-031505 Dothistroma septosporum 70.00 5.00e-61 224.00
IUUC-Dme-032097 Drosophila melanogaster 70.95 2.00e-61 225.00
IUUC-Ete-032369 Echinops telfairi 70.27 3.00e-62 228.00
IUUC-Eca-033230 Equus caballus 70.27 3.00e-62 228.00
IUUC-Fca-036161 Felis catus 66.22 9.00e-59 216.00
IUUC-Fal-036781 Ficedula albicollis 67.57 6.00e-60 220.00
IUUC-Fox-037840 Fusarium oxysporum 73.47 1.00e-64 236.00
IUUC-Fso-038118 Fusarium solani 72.11 4.00e-64 234.00
IUUC-Gmo-039561 Gadus morhua 70.47 2.00e-62 229.00
IUUC-Ggr-039807 Gaeumannomyces graminis 72.48 2.00e-64 235.00
IUUC-Gga-041024 Gallus gallus 70.27 3.00e-62 228.00
IUUC-Gac-042450 Gasterosteus aculeatus 68.24 3.00e-60 221.00
IUUC-Gma-043982 Glycine max 68.71 2.00e-61 225.00
IUUC-Ggo-044660 Gorilla gorilla 69.59 1.00e-61 226.00
IUUC-Hsa-045881 Homo sapiens 70.27 3.00e-62 228.00
IUUC-Hvu-047346 Hordeum vulgare 68.03 6.00e-61 224.00
IUUC-Itr-048350 Ictidomys tridecemlineatus 63.51 3.00e-54 201.00
IUUC-Kpa-049285 Komagataella pastoris 77.48 3.00e-70 254.00
IUUC-Lch-050548 Latimeria chalumnae 65.10 1.00e-57 213.00
IUUC-Lpe-051394 Leersia perrieri 68.03 5.00e-61 224.00
IUUC-Loc-052205 Lepisosteus oculatus 70.27 3.00e-62 228.00
IUUC-Lma-053056 Leptosphaeria maculans 77.55 2.00e-66 242.00
IUUC-Laf-053540 Loxodonta africana 69.57 2.00e-57 211.00
IUUC-Mcc-054863 Macaca mulatta 70.27 3.00e-62 228.00
IUUC-Meu-056482 Macropus eugenii 69.57 2.00e-57 211.00
IUUC-Mor-057014 Magnaporthe oryzae 69.80 1.00e-61 226.00
IUUC-Mpo-057586 Magnaporthe poae 72.48 2.00e-64 235.00
IUUC-Mtr-058552 Medicago truncatula 62.11 1.00e-57 213.00
IUUC-Mla-058920 Melampsora laricipopulina 69.59 5.00e-61 224.00
IUUC-Mga-059649 Meleagris gallopavo 65.54 7.00e-58 213.00
IUUC-Mvi-060483 Microbotryum violaceum 70.07 8.00e-62 226.00
IUUC-Mmr-061167 Microcebus murinus 70.27 3.00e-62 228.00
IUUC-Mdo-062701 Monodelphis domestica 70.27 3.00e-62 228.00
IUUC-Mmu-064070 Mus musculus 70.27 3.00e-62 228.00
IUUC-Mac-064988 Musa acuminata 68.71 2.00e-61 225.00
IUUC-Mpu-066401 Mustela putorius furo 70.27 3.00e-62 228.00
IUUC-Mlu-067229 Myotis lucifugus 68.53 3.00e-58 214.00
IUUC-Nfi-068526 Neosartorya fischeri 73.97 1.00e-64 236.00
IUUC-Ncr-068643 Neurospora crassa 73.29 1.00e-63 233.00
IUUC-Nle-070146 Nomascus leucogenys 70.27 3.00e-62 228.00
IUUC-Opr-070232 Ochotona princeps 57.43 3.00e-45 171.00
IUUC-Ont-071741 Oreochromis niloticus 70.27 2.00e-62 229.00
IUUC-Oan-073174 Ornithorhynchus anatinus 68.06 2.00e-58 215.00
IUUC-Ocu-074712 Oryctolagus cuniculus 70.27 3.00e-62 228.00
IUUC-Oba-075408 Oryza barthii 68.03 5.00e-61 224.00
IUUC-Obr-076881 Oryza brachyantha 68.03 5.00e-61 224.00
IUUC-Ogl-077242 Oryza glaberrima 68.03 5.00e-61 224.00
IUUC-Ogu-078465 Oryza glumaepatula 68.03 5.00e-61 224.00
IUUC-Oin-080035 Oryza indica 68.12 4.00e-57 211.00
IUUC-Olo-080555 Oryza longistaminata 68.03 5.00e-61 224.00
IUUC-Ome-081653 Oryza meridionalis 68.03 5.00e-61 224.00
IUUC-Oni-082400 Oryza nivara 68.03 5.00e-61 224.00
IUUC-Opu-083130 Oryza punctata 68.89 3.00e-56 209.00
IUUC-Oru-084649 Oryza rufipogon 68.03 5.00e-61 224.00
IUUC-Osa-085629 Oryza sativa 68.03 5.00e-61 224.00
IUUC-Ola-087083 Oryzias latipes 68.63 9.00e-62 226.00
IUUC-Olu-087886 Ostreococcus lucimarinus 60.81 6.00e-53 197.00
IUUC-Oga-088983 Otolemur garnettii 67.12 3.00e-58 215.00
IUUC-Oar-090440 Ovis aries 69.59 1.00e-61 226.00
IUUC-Ptr-090572 Pan troglodytes 70.27 3.00e-62 228.00
IUUC-Pan-092503 Papio anubis 68.92 7.00e-61 223.00
IUUC-Psi-093419 Pelodiscus sinensis 70.45 5.00e-55 204.00
IUUC-Pno-094838 Phaeosphaeria nodorum 77.18 2.00e-67 245.00
IUUC-Ppa-096014 Physcomitrella patens 71.23 1.00e-62 229.00
IUUC-Pfo-096111 Poecilia formosa 70.95 6.00e-63 230.00
IUUC-Pab-097778 Pongo abelii 70.27 3.00e-62 228.00
IUUC-Pop-099707 Populus trichocarpa 68.71 4.00e-61 224.00
IUUC-Pca-100334 Procavia capensis 64.19 9.00e-56 206.00
IUUC-Ppe-101149 Prunus persica 68.71 3.00e-61 225.00
IUUC-Pva-102979 Pteropus vampyrus 70.27 3.00e-62 228.00
IUUC-Pgr-103654 Puccinia graminis 72.30 4.00e-62 227.00
IUUC-Ptt-103752 Puccinia triticina 69.66 7.00e-59 217.00
IUUC-Pte-104137 Pyrenophora teres 77.55 7.00e-67 243.00
IUUC-Pyt-104513 Pyrenophora triticirepentis 77.55 7.00e-67 243.00
IUUC-Rno-105927 Rattus norvegicus 70.27 3.00e-62 228.00
IUUC-Sha-107493 Sarcophilus harrisii 70.27 3.00e-62 228.00
IUUC-Sja-107878 Schizosaccharomyces japonicus 67.57 2.00e-57 212.00
IUUC-Spo-108062 Schizosaccharomyces pombe 70.55 1.00e-58 216.00
IUUC-Ssl-108395 Sclerotinia sclerotiorum 72.60 2.00e-62 229.00
IUUC-Smo-109587 Selaginella moellendorffii 68.03 2.00e-58 215.00
IUUC-Sit-110069 Setaria italica 68.03 5.00e-61 224.00
IUUC-Sly-110863 Solanum lycopersicum 68.71 4.00e-61 224.00
IUUC-Stu-112254 Solanum tuberosum 68.03 1.00e-60 223.00
IUUC-Sar-113464 Sorex araneus 69.57 2.00e-57 211.00
IUUC-Sbi-114278 Sorghum bicolor 68.03 9.00e-61 223.00
IUUC-Sre-114927 Sporisorium reilianum 74.15 1.00e-65 239.00
IUUC-Ssc-116096 Sus scrofa 70.27 3.00e-62 228.00
IUUC-Tgu-117266 Taeniopygia guttata 69.57 2.00e-57 211.00
IUUC-Tru-117903 Takifugu rubripes 70.95 5.00e-63 231.00
IUUC-Tsy-118952 Tarsius syrichta 69.57 2.00e-57 211.00
IUUC-Tni-120038 Tetraodon nigroviridis 70.95 5.00e-63 231.00
IUUC-Tca-121752 Theobroma cacao 69.63 2.00e-56 209.00
IUUC-Tre-121979 Trichoderma reesei 73.47 7.00e-64 233.00
IUUC-Tvi-122515 Trichoderma virens 73.47 2.00e-63 232.00
IUUC-Tae-125309 Triticum aestivum 68.03 6.00e-61 224.00
IUUC-Tur-126865 Triticum urartu 64.43 2.00e-56 209.00
IUUC-Tme-127129 Tuber melanosporum 74.83 8.00e-65 236.00
IUUC-Tbe-127846 Tupaia belangeri 69.57 2.00e-57 211.00
IUUC-Ttr-128808 Tursiops truncatus 67.57 5.00e-59 217.00
IUUC-Uma-129548 Ustilago maydis 74.15 3.00e-65 238.00
IUUC-Vda-129810 Verticillium dahliae 73.47 1.00e-64 236.00
IUUC-Vpa-130221 Vicugna pacos 63.97 4.00e-49 184.00
IUUC-Vvi-131158 Vitis vinifera 69.12 9.00e-57 210.00
IUUC-Xtr-132366 Xenopus tropicalis 68.67 3.00e-60 221.00
IUUC-Xma-133961 Xiphophorus maculatus 70.95 6.00e-63 230.00
IUUC-Yli-134605 Yarrowia lipolytica 75.84 9.00e-66 239.00
IUUC-Zma-135535 Zea mays 64.10 8.00e-59 217.00
Created Date 25-Jun-2017

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